SARS-CoV-2 evolution in animals suggests mechanisms for rapid variant selection
Bashor, Laura, Gagne, Roderick B., Bosco-Lauth, Angela M., Bowen, Richard A., Stenglein, Mark, VandeWoude, Sue
Published in Proceedings of the National Academy of Sciences - PNAS (02.11.2021)
Published in Proceedings of the National Academy of Sciences - PNAS (02.11.2021)
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Feline Leukemia Virus Frequently Spills Over from Domestic Cats to North American Pumas
Petch, Raegan J, Gagne, Roderick B, Chiu, Elliott, Mankowski, Clara, Rudd, Jaime, Roelke-Parker, Melody, Vickers, T Winston, Logan, Kenneth A, Alldredge, Mathew, Clifford, Deana, Cunningham, Mark W, Onorato, Dave, VandeWoude, Sue
Published in Journal of virology (14.12.2022)
Published in Journal of virology (14.12.2022)
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Endogenous feline leukemia virus long terminal repeat integration site diversity is highly variable in related and unrelated domestic cats
Chiu, Elliott S, McDonald, Coby A, Gagne, Roderick B, Dunkleberger, Henry, Moxcey, Matthew, VandeWoude, Sue
Published in Retrovirology (12.02.2024)
Published in Retrovirology (12.02.2024)
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Prevalence and Genomic Sequence Analysis of Domestic Cat Hepadnavirus in the United States
Stone, Cassidy, Petch, Raegan, Gagne, Roderick B, Nehring, Mary, Tu, Thomas, Beatty, Julia A, VandeWoude, Sue
Published in Viruses (21.09.2022)
Published in Viruses (21.09.2022)
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Multiple Introductions of SARS-CoV-2 Alpha and Delta Variants into White-Tailed Deer in Pennsylvania
Marques, Andrew D, Sherrill-Mix, Scott, Everett, John K, Adhikari, Hriju, Reddy, Shantan, Ellis, Julie C, Zeliff, Haley, Greening, Sabrina S, Cannuscio, Carolyn C, Strelau, Katherine M, Collman, Ronald G, Kelly, Brendan J, Rodino, Kyle G, Bushman, Frederic D, Gagne, Roderick B, Anis, Eman
Published in mBio (26.10.2022)
Published in mBio (26.10.2022)
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Multi‐population puma connectivity could restore genomic diversity to at‐risk coastal populations in California
Gustafson, Kyle D., Gagne, Roderick B., Buchalski, Michael R., Vickers, T. Winston, Riley, Seth P. D., Sikich, Jeff A., Rudd, Jaime L., Dellinger, Justin A., LaCava, Melanie E. F., Ernest, Holly B.
Published in Evolutionary applications (01.02.2022)
Published in Evolutionary applications (01.02.2022)
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Host relatedness and landscape connectivity shape pathogen spread in the puma, a large secretive carnivore
Fountain-Jones, Nicholas M, Kraberger, Simona, Gagne, Roderick B, Trumbo, Daryl R, Salerno, Patricia E, Chris Funk, W, Crooks, Kevin, Biek, Roman, Alldredge, Mathew, Logan, Ken, Baele, Guy, Dellicour, Simon, Ernest, Holly B, VandeWoude, Sue, Carver, Scott, Craft, Meggan E
Published in Communications biology (04.01.2021)
Published in Communications biology (04.01.2021)
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Frequent cross-species transmissions of foamy virus between domestic and wild felids
Kraberger, Simona, Fountain-Jones, Nicholas M, Gagne, Roderick B, Malmberg, Jennifer, Dannemiller, Nicholas G, Logan, Ken, Alldredge, Mat, Varsani, Arvind, Crooks, Kevin R, Craft, Meggan, Carver, Scott, VandeWoude, Sue
Published in Virus evolution (01.01.2020)
Published in Virus evolution (01.01.2020)
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Apathogenic proxies for transmission dynamics of a fatal virus
Gilbertson, Marie L. J., Fountain-Jones, Nicholas M., Malmberg, Jennifer L., Gagne, Roderick B., Lee, Justin S., Kraberger, Simona, Kechejian, Sarah, Petch, Raegan, Chiu, Elliott S., Onorato, Dave, Cunningham, Mark W., Crooks, Kevin R., Funk, W. Chris, Carver, Scott, VandeWoude, Sue, VanderWaal, Kimberly, Craft, Meggan E.
Published in Frontiers in veterinary science (08.09.2022)
Published in Frontiers in veterinary science (08.09.2022)
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Feline Leukemia Virus (FeLV) Endogenous and Exogenous Recombination Events Result in Multiple FeLV-B Subtypes during Natural Infection
Erbeck, Katelyn, Gagne, Roderick B, Kraberger, Simona, Chiu, Elliott S, Roelke-Parker, Melody, VandeWoude, Sue
Published in Journal of virology (25.08.2021)
Published in Journal of virology (25.08.2021)
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Journal Article
Parasites as conservation tools
Gagne, Roderick B., Crooks, Kevin R., Craft, Meggan E., Chiu, Elliott S., Fountain‐Jones, Nicholas M., Malmberg, Jennifer L., Carver, Scott, Funk, W. Chris, VandeWoude, Sue
Published in Conservation biology (01.02.2022)
Published in Conservation biology (01.02.2022)
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Reply to Chandra: Severe Acute Respiratory Syndrome-Coronavirus-2 variant analysis reveals within-host selection of intra-host single nucleotide variants
Bashor, Laura, Gagne, Roderick B., Bosco-Lauth, Angela, Bowen, Richard A., Stenglein, Mark, VandeWoude, Sue
Published in Proceedings of the National Academy of Sciences - PNAS (23.08.2022)
Published in Proceedings of the National Academy of Sciences - PNAS (23.08.2022)
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Journal Article
Rapid evolution of SARS-CoV-2 in domestic cats
Bashor, Laura, Gagne, Roderick B, Bosco-Lauth, Angela, Stenglein, Mark, VandeWoude, Sue
Published in Virus evolution (01.12.2022)
Published in Virus evolution (01.12.2022)
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MrIML: Multi‐response interpretable machine learning to model genomic landscapes
Fountain‐Jones, Nicholas M., Kozakiewicz, Christopher P., Forester, Brenna R., Landguth, Erin L., Carver, Scott, Charleston, Michael, Gagne, Roderick B., Greenwell, Brandon, Kraberger, Simona, Trumbo, Daryl R., Mayer, Michael, Clark, Nicholas J., Machado, Gustavo
Published in Molecular ecology resources (01.11.2021)
Published in Molecular ecology resources (01.11.2021)
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Urbanization impacts apex predator gene flow but not genetic diversity across an urban‐rural divide
Trumbo, Daryl R., Salerno, Patricia E., Logan, Kenneth A., Alldredge, Mathew W., Gagne, Roderick B., Kozakiewicz, Christopher P., Kraberger, Simona, Fountain‐Jones, Nicholas M., Craft, Meggan E., Carver, Scott, Ernest, Holly B., Crooks, Kevin R., VandeWoude, Sue, Funk, W. Chris
Published in Molecular ecology (01.11.2019)
Published in Molecular ecology (01.11.2019)
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Urbanization reduces genetic connectivity in bobcats (Lynx rufus) at both intra– and interpopulation spatial scales
Kozakiewicz, Christopher P., Burridge, Christopher P., Funk, W. Chris, Salerno, Patricia E., Trumbo, Daryl R., Gagne, Roderick B., Boydston, Erin E., Fisher, Robert N., Lyren, Lisa M., Jennings, Megan K., Riley, Seth P. D., Serieys, Laurel E. K., VandeWoude, Sue, Crooks, Kevin R., Carver, Scott
Published in Molecular ecology (01.12.2019)
Published in Molecular ecology (01.12.2019)
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