TCR meta-clonotypes for biomarker discovery with tcrdist3 enabled identification of public, HLA-restricted clusters of SARS-CoV-2 TCRs
Mayer-Blackwell, Koshlan, Schattgen, Stefan, Cohen-Lavi, Liel, Crawford, Jeremy C, Souquette, Aisha, Gaevert, Jessica A, Hertz, Tomer, Thomas, Paul G, Bradley, Philip, Fiore-Gartland, Andrew
Published in eLife (30.11.2021)
Published in eLife (30.11.2021)
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Multi-variate model of T cell clonotype competition and homeostasis
Luque Duque, Daniel, Gaevert, Jessica A., Thomas, Paul G., López-García, Martín, Lythe, Grant, Molina-París, Carmen
Published in Scientific reports (11.12.2023)
Published in Scientific reports (11.12.2023)
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Quantifying T Cell Cross-Reactivity: Influenza and Coronaviruses
Gaevert, Jessica Ann, Luque Duque, Daniel, Lythe, Grant, Molina-París, Carmen, Thomas, Paul Glyndwr
Published in Viruses (07.09.2021)
Published in Viruses (07.09.2021)
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Characterization, functional validation, and analysis of the cross-reactive T cell repertoire in the context of heterosubtypic influenza A virus infection
Gaevert, Jessica A, Duan, Susu, Minervina, Anastasia, Pogorelyy, Mikhail, Mayer-Blackwell, Koshlan, Kirk, Allison, Crawford, Jeremy, Thomas, Paul
Published in The Journal of immunology (1950) (01.05.2023)
Published in The Journal of immunology (1950) (01.05.2023)
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TCR meta-clonotypes for biomarker discovery with tcrdist3: identification of public, HLA-restricted SARS-CoV-2 associated TCR features
Mayer-Blackwell, Koshlan, Schattgen, Stefan, Cohen-Lavi, Liel, Crawford, Jeremy Chase, Souquette, Aisha, Gaevert, Jessica A, Hertz, Tomer, Thomas, Paul G, Bradley, Philip, Fiore-Gartland, Andrew
Published in bioRxiv (19.03.2021)
Published in bioRxiv (19.03.2021)
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rAAV expressing a COBRA-designed influenza hemagglutinin generates a protective and durable adaptive immune response with a single dose
Wiggins, Kristin B, Winston, Stephen M, Reeves, Isaiah L, Gaevert, Jessica, Spence, Yunyu, Brimble, Mark A, Livingston, Brandi, Morton, Christopher L, Thomas, Paul G, Sant, Andrea J, Ross, Ted M, Davidoff, Andrew M, Schultz-Cherry, Stacey
Published in Journal of virology (20.08.2024)
Published in Journal of virology (20.08.2024)
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Necroptosis blockade prevents lung injury in severe influenza
Gautam, Avishekh, Boyd, David F., Nikhar, Sameer, Zhang, Ting, Siokas, Ioannis, Van de Velde, Lee-Ann, Gaevert, Jessica, Meliopoulos, Victoria, Thapa, Bikash, Rodriguez, Diego A., Cai, Kathy Q., Yin, Chaoran, Schnepf, Daniel, Beer, Julius, DeAntoneo, Carly, Williams, Riley M., Shubina, Maria, Livingston, Brandi, Zhang, Dingqiang, Andrake, Mark D., Lee, Seungheon, Boda, Raghavender, Duddupudi, Anantha L., Crawford, Jeremy Chase, Vogel, Peter, Loch, Christian, Schwemmle, Martin, Fritz, Lawrence C., Schultz-Cherry, Stacey, Green, Douglas R., Cuny, Gregory D., Thomas, Paul G., Degterev, Alexei, Balachandran, Siddharth
Published in Nature (London) (25.04.2024)
Published in Nature (London) (25.04.2024)
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