Comparative genomics of emerging human ehrlichiosis agents
Dunning Hotopp, Julie C, Lin, Mingqun, Madupu, Ramana, Crabtree, Jonathan, Angiuoli, Samuel V, Eisen, Jonathan A, Eisen, Jonathan, Seshadri, Rekha, Ren, Qinghu, Wu, Martin, Utterback, Teresa R, Smith, Shannon, Lewis, Matthew, Khouri, Hoda, Zhang, Chunbin, Niu, Hua, Lin, Quan, Ohashi, Norio, Zhi, Ning, Nelson, William, Brinkac, Lauren M, Dodson, Robert J, Rosovitz, M J, Sundaram, Jaideep, Daugherty, Sean C, Davidsen, Tanja, Durkin, Anthony S, Gwinn, Michelle, Haft, Daniel H, Selengut, Jeremy D, Sullivan, Steven A, Zafar, Nikhat, Zhou, Liwei, Benahmed, Faiza, Forberger, Heather, Halpin, Rebecca, Mulligan, Stephanie, Robinson, Jeffrey, White, Owen, Rikihisa, Yasuko, Tettelin, Hervé
Published in PLoS genetics (01.02.2006)
Published in PLoS genetics (01.02.2006)
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complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000
Buell, C. Robin, Joardar, Vinita, Lindeberg, Magdalen, Selengut, Jeremy, Paulsen, Ian T, Gwinn, Michelle L, Dodson, Robert J, Deboy, Robert T, Durkin, A. Scott, Kolonay, James F, Madupu, Ramana, Daugherty, Sean, Brinkac, Lauren, Beanan, Maureen J, Haft, Daniel H, Nelson, William C, Davidsen, Tanja, Zafar, Nikhat, Zhou, Liwei, Liu, Jia, Yuan, Qiaoping, Khouri, Hoda, Fedorova, Nadia, Tran, Bao, Russell, Daniel, Berry, Kristi, Utterback, Teresa, Van Aken, Susan E, Feldblyum, Tamara V, D'Ascenzo, Mark, Deng, Wen-Ling, Ramos, Adela R, Alfano, James R, Cartinhour, Samuel, Chatterjee, Arun K, Delaney, Terrence P, Lazarowitz, Sondra G, Martin, Gregory B, Schneider, David J, Tang, Xiaoyan, Bender, Carol L, White, Owen, Fraser, Claire M, Collmer, Alan
Published in Proceedings of the National Academy of Sciences - PNAS (02.09.2003)
Published in Proceedings of the National Academy of Sciences - PNAS (02.09.2003)
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Structural Flexibility in the Burkholderia mallei Genome
Nierman, William C., DeShazer, David, Kim, H. Stanley, Tettelin, Herve, Nelson, Karen E., Feldblyum, Tamara, Ulrich, Ricky L., Ronning, Catherine M., Brinkac, Lauren M., Daugherty, Sean C., Davidsen, Tanja D., Deboy, Robert T., Dimitrov, George, Dodson, Robert J., Durkin, A. Scott, Gwinn, Michelle L., Haft, Daniel H., Khouri, Hoda, Kolonay, James F., Madupu, Ramana, Mohammoud, Yasmin, Nelson, William C., Radune, Diana, Romero, Claudia M., Sarria, Saul, Selengut, Jeremy, Shamblin, Christine, Sullivan, Steven A., White, Owen, Yu, Yan, Zafar, Nikhat, Zhou, Liwei, Fraser, Claire M., Greenberg, E. Peter
Published in Proceedings of the National Academy of Sciences - PNAS (28.09.2004)
Published in Proceedings of the National Academy of Sciences - PNAS (28.09.2004)
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DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae
Smith, Hamilton O, Peterson, Jeremy D, Nelson, Karen E, Gill, Steven R, Mekalanos, John J, Fleishmann, Robert D, McDonald, Lisa, Hickey, Erin K, Nierman, William C, Bass, Steven, Dragoi, Ioana, White, Owen, Tettelin, Hervé, Fraser, Claire M, Umayam, Lowell, Richardson, Delwood, Read, Timothy D, Ermolaeva, Maria D, Colwell, Rita R, Sellers, Patrick, Clayton, Rebecca A, Eisen, Jonathan A, Utterback, Teresa, Dodson, Robert J, Salzberg, Steven L, Venter, J. Craig, Gwinn, Michelle L, Haft, Daniel H, Vamathevan, Jessica, Qin, Haiying, Nelson, William C, Heidelberg, John F
Published in Nature (London) (03.08.2000)
Published in Nature (London) (03.08.2000)
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Complete Genome Sequence of the Oral Pathogenic Bacterium Porphyromonas gingivalis Strain W83
Nelson, Karen E, Fleischmann, Robert D, DeBoy, Robert T, Paulsen, Ian T, Fouts, Derrick E, Eisen, Jonathan A, Daugherty, Sean C, Dodson, Robert J, Durkin, A Scott, Gwinn, Michelle, Haft, Daniel H, Kolonay, James F, Nelson, William C, Mason, Tanya, Tallon, Luke, Gray, Jessica, Granger, David, Tettelin, Hervé, Dong, Hong, Galvin, Jamie L, Duncan, Margaret J, Dewhirst, Floyd E, Fraser, Claire M
Published in Journal of Bacteriology (01.09.2003)
Published in Journal of Bacteriology (01.09.2003)
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Complete Genome Sequence of Neisseria meningitidis Serogroup B Strain MC58
Tettelin, Hervé, Saunders, Nigel J., Heidelberg, John, Jeffries, Alex C., Nelson, Karen E., Eisen, Jonathan A., Ketchum, Karen A., Hood, Derek W., Peden, John F., Dodson, Robert J., Nelson, William C., Gwinn, Michelle L., DeBoy, Robert, Peterson, Jeremy D., Hickey, Erin K., Haft, Daniel H., Salzberg, Steven L., White, Owen, Fleischmann, Robert D., Dougherty, Brian A., Mason, Tanya, Ciecko, Anne, Parksey, Debbie S., Blair, Eric, Cittone, Henry, Clark, Emily B., Cotton, Matthew D., Utterback, Terry R., Khouri, Hoda, Qin, Haiying, Vamathevan, Jessica, Gill, John, Scarlato, Vincenzo, Masignani, Vega, Pizza, Mariagrazia, Grandi, Guido, Sun, Li, Smith, Hamilton O., Fraser, Claire M., Moxon, E. Richard, Rappuoli, Rino, Venter, J. Craig
Published in Science (American Association for the Advancement of Science) (10.03.2000)
Published in Science (American Association for the Advancement of Science) (10.03.2000)
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Genomewide Identification of Pseudomonas syringae pv. tomato DC3000 Promoters Controlled by the HrpL Alternative Sigma Factor
Fouts, Derrick E., Abramovitch, Robert B., Alfano, James R., Baldo, Angela M., Buell, C. Robin, Cartinhour, Samuel, Chatterjee, Arun K., D'Ascenzo, Mark, Gwinn, Michelle L., Lazarowitz, Sondra G., Lin, Nai-Chun, Martin, Gregory B., Rehm, Amos H., Schneider, David J., van Dijk, Karin, Tang, Xiaoyan, Collmer, Alan
Published in Proceedings of the National Academy of Sciences - PNAS (19.02.2002)
Published in Proceedings of the National Academy of Sciences - PNAS (19.02.2002)
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bacterial genome in flux: the twelve linear and nine circular extrachromosomal DNAs in an infectious isolate of the Lyme disease spirochete Borrelia burgdorferi
Casjens, S, Palmer, N, Van Vugt, R, Huang, W.M, Stevenson, B, Rosa, P, Lathigra, R, Sutton, G, Peterson, J, Dodson, R.J
Published in Molecular microbiology (01.02.2000)
Published in Molecular microbiology (01.02.2000)
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Evidence for lateral gene transfer between Archaea and Bacteria from genome sequence of Thermotoga maritima
Fraser, Claire M, Nelson, Karen E, Clayton, Rebecca A, Gill, Steven R, Gwinn, Michelle L, Dodson, Robert J, Haft, Daniel H, Hickey, Erin K, Peterson, Jeremy D, Nelson, William C, Ketchum, Karen A, McDonald, Lisa, Utterback, Teresa R, Malek, Joel A, Linher, Katja D, Garrett, Mina M, Stewart, Ashley M, Cotton, Matthew D, Pratt, Matthew S, Phillips, Cheryl A, Richardson, Delwood, Heidelberg, John, Sutton, Granger G, Fleischmann, Robert D, Eisen, Jonathan A, White, Owen, Salzberg, Steven L, Smith, Hamilton O, Venter, J. Craig
Published in Nature (London) (27.05.1999)
Published in Nature (London) (27.05.1999)
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Genome Sequence of the Radioresistant Bacterium Deinococcus radiodurans R1
White, Owen, Eisen, Jonathan A., Heidelberg, John F., Hickey, Erin K., Peterson, Jeremy D., Dodson, Robert J., Haft, Daniel H., Gwinn, Michelle L., Nelson, William C., Richardson, Delwood L., Moffat, Kelly S., Qin, Haiying, Jiang, Lingxia, Pamphile, Wanda, Crosby, Marie, Shen, Mian, Vamathevan, Jessica J., Lam, Peter, McDonald, Lisa, Utterback, Terry, Zalewski, Celeste, Makarova, Kira S., Aravind, L., Daly, Michael J., Minton, Kenneth W., Fleischmann, Robert D., Ketchum, Karen A., Nelson, Karen E., Salzberg, Steven, Smith, Hamilton O., Venter, J. Craig, Fraser, Claire M.
Published in Science (American Association for the Advancement of Science) (19.11.1999)
Published in Science (American Association for the Advancement of Science) (19.11.1999)
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The Complete Genome Sequence of Chlorobium tepidum TLS, A Photosynthetic, Anaerobic, Green-Sulfur Bacterium
Eisen, Jonathan A., Nelson, Karen E., Paulsen, Ian T., Heidelberg, John F., Wu, Martin, Dodson, Robert J., Deboy, Robert, Gwinn, Michelle L., Nelson, William C., Haft, Daniel H., Hickey, Erin K., Peterson, Jeremy D., Durkin, A. Scott, Kolonay, James L., Yang, Fan, Holt, Ingeborg, Umayam, Lowell A., Mason, Tanya, Brenner, Michael, Shea, Terrance P., Parksey, Debbie, Nierman, William C., Feldblyum, Tamara V., Hansen, Cheryl L., Craven, M. Brook, Radune, Diana, Vamathevan, Jessica, Khouri, Hoda, White, Owen, Gruber, Tanja M., Ketchum, Karen A., Venter, J. Craig, Tettelin, Hervé, Bryant, Donald A., Fraser, Claire M.
Published in Proceedings of the National Academy of Sciences - PNAS (09.07.2002)
Published in Proceedings of the National Academy of Sciences - PNAS (09.07.2002)
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The Plant-Associated Microbe Gene Ontology (PAMGO) Consortium: community development of new Gene Ontology terms describing biological processes involved in microbe-host interactions
Torto-Alalibo, Trudy, Collmer, Candace W, Gwinn-Giglio, Michelle
Published in BMC microbiology (19.02.2009)
Published in BMC microbiology (19.02.2009)
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Genome Sequence of Enterobacter radicincitans DSM16656T, a Plant Growth-Promoting Endophyte
Witzel, Katja, Gwinn-Giglio, Michelle, Nadendla, Suvarna, Shefchek, Kent, Ruppel, Silke
Published in Journal of Bacteriology (01.10.2012)
Published in Journal of Bacteriology (01.10.2012)
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DNA uptake signal sequences in naturally transformable bacteria
Smith, Hamilton O, Gwinn, Michelle L, Salzberg, Steven L
Published in Research in microbiology (01.11.1999)
Published in Research in microbiology (01.11.1999)
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Unifying Themes in Microbial Associations with Animal and Plant Hosts Described Using the Gene Ontology
TORTO-ALALIBO, Trudy, COLLMER, Candace W, BIRD, David, DEAN, Ralph A, GLASNER, Jeremy D, PERNA, Nicole, SETUBAL, Joao C, COLLMER, Alan, TYLER, Brett M, GWINN-GIGLIO, Michelle, LINDEBERG, Magdalen, SHAOWU MENG, CHIBUCOS, Marcus C, TSENG, Tsai-Tien, LOMAX, Jane, BIEHL, Bryan, IRELAND, Amelia
Published in Microbiology and Molecular Biology Reviews (01.12.2010)
Published in Microbiology and Molecular Biology Reviews (01.12.2010)
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AN ANALYSIS OF INITIAL ACQUISITION AND MAINTENANCE OF SIGHT WORDS FOLLOWING PICTURE MATCHING AND COPY, COVER, AND COMPARE TEACHING METHODS
Conley, Colleen M., Derby, K. Mark, Roberts-Gwinn, Michelle, Weber, Kimberly P., McLaughlin, T. F.
Published in Journal of applied behavior analysis (2004)
Published in Journal of applied behavior analysis (2004)
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Genome Analysis of Multiple Pathogenic Isolates of Streptococcus agalactiae: Implications for the Microbial "Pan-Genome"
Tettelin, Hervé, Masignani, Vega, Cieslewicz, Michael J., Donati, Claudio, Medini, Duccio, Ward, Naomi L., Angiuoli, Samuel V., Crabtree, Jonathan, Jones, Amanda L., Durkin, A. Scott, DeBoy, Robert T., Davidsen, Tanja M., Mora, Marirosa, Scarselli, Maria, Immaculada Margarit y Ros, Peterson, Jeremy D., Hauser, Christopher R., Sundaram, Jaideep P., Nelson, William C., Madupu, Ramana, Brinkac, Lauren M., Dodson, Robert J., Rosovitz, Mary J., Sullivan, Steven A., Daugherty, Sean C., Haft, Daniel H., Selengut, Jeremy, Gwinn, Michelle L., Zhou, Liwei, Zafar, Nikhat, Khouri, Hoda, Radune, Diana, Dimitrov, George, Watkins, Kisha, Kevin J. B. O'Connor, Smith, Shannon, Utterback, Teresa R., White, Owen, Rubens, Craig E., Grandi, Guido, Madoff, Lawrence C., Kasper, Dennis L., Telford, John L., Wessels, Michael R., Rappuoli, Rino, Fraser, Claire M.
Published in Proceedings of the National Academy of Sciences - PNAS (27.09.2005)
Published in Proceedings of the National Academy of Sciences - PNAS (27.09.2005)
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CloVR-Microbe: Assembly, gene finding and functional annotation of raw sequence data from single microbial genome projects – standard operating procedure, version 1.0
White, Owen, Angiuoli, Samuel, Fricke, W. Florian, Galens, Kevin, White, James, Arze, Cesar, Matalka, Malcolm, Gwinn Giglio, Michelle, Team, The CloVR
Published in Nature precedings (12.10.2011)
Published in Nature precedings (12.10.2011)
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