Multiplex single-cell profiling of chromatin accessibility by combinatorial cellular indexing
Cusanovich, Darren A., Daza, Riza, Adey, Andrew, Pliner, Hannah A., Christiansen, Lena, Gunderson, Kevin L., Steemers, Frank J., Trapnell, Cole, Shendure, Jay
Published in Science (American Association for the Advancement of Science) (22.05.2015)
Published in Science (American Association for the Advancement of Science) (22.05.2015)
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In vitro, long-range sequence information for de novo genome assembly via transposase contiguity
Adey, Andrew, Kitzman, Jacob O, Burton, Joshua N, Daza, Riza, Kumar, Akash, Christiansen, Lena, Ronaghi, Mostafa, Amini, Sasan, Gunderson, Kevin L, Steemers, Frank J, Shendure, Jay
Published in Genome research (01.12.2014)
Published in Genome research (01.12.2014)
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Haplotype phasing of whole human genomes using bead-based barcode partitioning in a single tube
Zhang, Fan, Christiansen, Lena, Thomas, Jerushah, Pokholok, Dmitry, Jackson, Ros, Morrell, Natalie, Zhao, Yannan, Wiley, Melissa, Welch, Emily, Jaeger, Erich, Granat, Ana, Norberg, Steven J, Halpern, Aaron, C Rogert, Maria, Ronaghi, Mostafa, Shendure, Jay, Gormley, Niall, Gunderson, Kevin L, Steemers, Frank J
Published in Nature biotechnology (01.09.2017)
Published in Nature biotechnology (01.09.2017)
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High-resolution genomic profiling of chromosomal aberrations using Infinium whole-genome genotyping
Peiffer, Daniel A, Le, Jennie M, Steemers, Frank J, Chang, Weihua, Jenniges, Tony, Garcia, Francisco, Haden, Kirt, Li, Jiangzhen, Shaw, Chad A, Belmont, John, Cheung, Sau Wai, Shen, Richard M, Barker, David L, Gunderson, Kevin L
Published in Genome Research (01.09.2006)
Published in Genome Research (01.09.2006)
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Journal Article
Global patterns of cis variation in human cells revealed by high-density allelic expression analysis
Lam, Kevin C L, Dewar, Ken, Harmsen, Eef, Kwan, Tony, Gagné, Vincent, Joly, Marie-Michele, Beaulieu, Patrick, Göring, Harald H H, Naumova, Anna K, Koka, Vonda, Verlaan, Dominique J, Graziani, Alexandru, Le, Jennie, Pastinen, Tomi, Harvey, Edward J, Pokholok, Dmitry K, Morcos, Lisanne, Sinnett, Daniel, Ge, Bing, Montpetit, Alexandre, Majewski, Jacek, Blanchette, Mathieu, Hoberman, Rose, Grundberg, Elin, Hamon, Robert, Gunderson, Kevin L, Dias, Joana
Published in Nature Genetics (01.11.2009)
Published in Nature Genetics (01.11.2009)
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Journal Article
Increased LIS1 expression affects human and mouse brain development
Lu, Xin-Yan, Horner, Michele, Day-Salvatore, Debra-Lynn, Sahoo, Trilochan, Withers, Marjorie A, Cheung, Sau Wai, Gunderson, Kevin L, Hunter, Jill V, Sapir, Tamar, Peiffer, Daniel A, Yanagawa, Yuchio, Reiner, Orly, Shchelochkov, Oleg A, Levy, Talia, Lupski, James R, Nezarati, Marjan M, Martinez, Salvador, Savage, Sarah K, Shinder, Vera, Harris, David J, Ann Shotts, Vern, Bi, Weimin, Amato, Stephen S, Beaudet, Arthur L, Zhang, Feng
Published in Nature Genetics (01.02.2009)
Published in Nature Genetics (01.02.2009)
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Journal Article
Decoding randomly ordered DNA arrays
Gunderson, Kevin L, Kruglyak, Semyon, Graige, Michael S, Garcia, Francisco, Kermani, Bahram G, Zhao, Chanfeng, Che, Diping, Dickinson, Todd, Wickham, Eliza, Bierle, Jim, Doucet, Dennis, Milewski, Monika, Yang, Robert, Siegmund, Chris, Haas, Juergen, Zhou, Lixin, Oliphant, Arnold, Fan, Jian-Bing, Barnard, Steven, Chee, Mark S
Published in Genome research (01.05.2004)
Published in Genome research (01.05.2004)
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Massively multiplex single-cell Hi-C
Ramani, Vijay, Deng, Xinxian, Qiu, Ruolan, Gunderson, Kevin L, Steemers, Frank J, Disteche, Christine M, Noble, William S, Duan, Zhijun, Shendure, Jay
Published in Nature methods (01.03.2017)
Published in Nature methods (01.03.2017)
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Journal Article
Allele-specific gene expression patterns in primary leukemic cells reveal regulation of gene expression by CpG site methylation
Milani, Lili, Lundmark, Anders, Nordlund, Jessica, Kiialainen, Anna, Flaegstad, Trond, Jonmundsson, Gudmundur, Kanerva, Jukka, Schmiegelow, Kjeld, Gunderson, Kevin L, Lönnerholm, Gudmar, Syvänen, Ann-Christine
Published in Genome Research (01.01.2009)
Published in Genome Research (01.01.2009)
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Power to detect risk alleles using genome-wide tag SNP panels
Eberle, Michael A, Ng, Pauline C, Kuhn, Kenneth, Zhou, Lixin, Peiffer, Daniel A, Galver, Luana, Viaud-Martinez, Karine A, Lawley, Cynthia Taylor, Gunderson, Kevin L, Shen, Richard, Murray, Sarah S
Published in PLoS genetics (01.10.2007)
Published in PLoS genetics (01.10.2007)
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Journal Article
High density DNA methylation array with single CpG site resolution
Bibikova, Marina, Barnes, Bret, Tsan, Chan, Ho, Vincent, Klotzle, Brandy, Le, Jennie M., Delano, David, Zhang, Lu, Schroth, Gary P., Gunderson, Kevin L., Fan, Jian-Bing, Shen, Richard
Published in Genomics (San Diego, Calif.) (01.10.2011)
Published in Genomics (San Diego, Calif.) (01.10.2011)
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Journal Article
Computational analysis of whole-genome differential allelic expression data in human
Wagner, James R, Ge, Bing, Pokholok, Dmitry, Gunderson, Kevin L, Pastinen, Tomi, Blanchette, Mathieu
Published in PLoS computational biology (01.07.2010)
Published in PLoS computational biology (01.07.2010)
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Deletion at fragile sites is a common and early event in Barrett's esophagus
Lai, Lisa A, Kostadinov, Rumen, Barrett, Michael T, Peiffer, Daniel A, Pokholok, Dimitry, Odze, Robert, Sanchez, Carissa A, Maley, Carlo C, Reid, Brian J, Gunderson, Kevin L, Rabinovitch, Peter S
Published in Molecular cancer research (01.08.2010)
Published in Molecular cancer research (01.08.2010)
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Journal Article
Haplotype-resolved whole-genome sequencing by contiguity-preserving transposition and combinatorial indexing
Amini, Sasan, Pushkarev, Dmitry, Christiansen, Lena, Kostem, Emrah, Royce, Tom, Turk, Casey, Pignatelli, Natasha, Adey, Andrew, Kitzman, Jacob O, Vijayan, Kandaswamy, Ronaghi, Mostafa, Shendure, Jay, Gunderson, Kevin L, Steemers, Frank J
Published in Nature genetics (01.12.2014)
Published in Nature genetics (01.12.2014)
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Journal Article
Sequences of 95 human MHC haplotypes reveal extreme coding variation in genes other than highly polymorphic HLA class I and II
Norman, Paul J, Norberg, Steven J, Guethlein, Lisbeth A, Nemat-Gorgani, Neda, Royce, Thomas, Wroblewski, Emily E, Dunn, Tamsen, Mann, Tobias, Alicata, Claudia, Hollenbach, Jill A, Chang, Weihua, Shults Won, Melissa, Gunderson, Kevin L, Abi-Rached, Laurent, Ronaghi, Mostafa, Parham, Peter
Published in Genome research (01.05.2017)
Published in Genome research (01.05.2017)
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Subangstrom single-molecule measurements of motor proteins using a nanopore
Derrington, Ian M, Craig, Jonathan M, Stava, Eric, Laszlo, Andrew H, Ross, Brian C, Brinkerhoff, Henry, Nova, Ian C, Doering, Kenji, Tickman, Benjamin I, Ronaghi, Mostafa, Mandell, Jeffrey G, Gunderson, Kevin L, Gundlach, Jens H
Published in Nature biotechnology (01.10.2015)
Published in Nature biotechnology (01.10.2015)
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A genome-wide scalable SNP genotyping assay using microarray technology
Gunderson, Kevin L, Steemers, Frank J, Lee, Grace, Mendoza, Leo G, Chee, Mark S
Published in Nature genetics (01.05.2005)
Published in Nature genetics (01.05.2005)
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