A general method to fine-tune fluorophores for live-cell and in vivo imaging
Grimm, Jonathan B, Muthusamy, Anand K, Liang, Yajie, Brown, Timothy A, Lemon, William C, Patel, Ronak, Lu, Rongwen, Macklin, John J, Keller, Philipp J, Ji, Na, Lavis, Luke D
Published in Nature methods (01.10.2017)
Published in Nature methods (01.10.2017)
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Journal Article
A general method to improve fluorophores for live-cell and single-molecule microscopy
Grimm, Jonathan B, English, Brian P, Chen, Jiji, Slaughter, Joel P, Zhang, Zhengjian, Revyakin, Andrey, Patel, Ronak, Macklin, John J, Normanno, Davide, Singer, Robert H, Lionnet, Timothée, Lavis, Luke D
Published in Nature methods (01.03.2015)
Published in Nature methods (01.03.2015)
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Journal Article
A general method to optimize and functionalize red-shifted rhodamine dyes
Grimm, Jonathan B, Tkachuk, Ariana N, Xie, Liangqi, Choi, Heejun, Mohar, Boaz, Falco, Natalie, Schaefer, Kathy, Patel, Ronak, Zheng, Qinsi, Liu, Zhe, Lippincott-Schwartz, Jennifer, Brown, Timothy A, Lavis, Luke D
Published in Nature methods (01.08.2020)
Published in Nature methods (01.08.2020)
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Journal Article
Bright photoactivatable fluorophores for single-molecule imaging
Grimm, Jonathan B, English, Brian P, Choi, Heejun, Muthusamy, Anand K, Mehl, Brian P, Dong, Peng, Brown, Timothy A, Lippincott-Schwartz, Jennifer, Liu, Zhe, Lionnet, Timothée, Lavis, Luke D
Published in Nature methods (01.12.2016)
Published in Nature methods (01.12.2016)
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Journal Article
Real-time quantification of single RNA translation dynamics in living cells
Morisaki, Tatsuya, Lyon, Kenneth, DeLuca, Keith F., DeLuca, Jennifer G., English, Brian P., Zhang, Zhengjian, Lavis, Luke D., Grimm, Jonathan B., Viswanathan, Sarada, Looger, Loren L., Lionnet, Timothee, Stasevich, Timothy J.
Published in Science (American Association for the Advancement of Science) (17.06.2016)
Published in Science (American Association for the Advancement of Science) (17.06.2016)
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Journal Article
Steroid Receptors Reprogram FoxA1 Occupancy through Dynamic Chromatin Transitions
Swinstead, Erin E., Miranda, Tina B., Paakinaho, Ville, Baek, Songjoon, Goldstein, Ido, Hawkins, Mary, Karpova, Tatiana S., Ball, David, Mazza, Davide, Lavis, Luke D., Grimm, Jonathan B., Morisaki, Tatsuya, Grøntved, Lars, Presman, Diego M., Hager, Gordon L.
Published in Cell (21.04.2016)
Published in Cell (21.04.2016)
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Journal Article
Bright and photostable chemigenetic indicators for extended in vivo voltage imaging
Abdelfattah, Ahmed S, Kawashima, Takashi, Singh, Amrita, Novak, Ondrej, Liu, Hui, Shuai, Yichun, Huang, Yi-Chieh, Campagnola, Luke, Seeman, Stephanie C, Yu, Jianing, Zheng, Jihong, Grimm, Jonathan B, Patel, Ronak, Friedrich, Johannes, Mensh, Brett D, Paninski, Liam, Macklin, John J, Murphy, Gabe J, Podgorski, Kaspar, Lin, Bei-Jung, Chen, Tsai-Wen, Turner, Glenn C, Liu, Zhe, Koyama, Minoru, Svoboda, Karel, Ahrens, Misha B, Lavis, Luke D, Schreiter, Eric R
Published in Science (American Association for the Advancement of Science) (16.08.2019)
Published in Science (American Association for the Advancement of Science) (16.08.2019)
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Journal Article
Robust model-based analysis of single-particle tracking experiments with Spot-On
Hansen, Anders S, Woringer, Maxime, Grimm, Jonathan B, Lavis, Luke D, Tjian, Robert, Darzacq, Xavier
Published in eLife (04.01.2018)
Published in eLife (04.01.2018)
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Journal Article
Glutamate-induced RNA localization and translation in neurons
Yoon, Young J., Wu, Bin, Buxbaum, Adina R., Das, Sulagna, Tsai, Albert, English, Brian P., Grimm, Jonathan B., Lavis, Luke D., Singer, Robert H.
Published in Proceedings of the National Academy of Sciences - PNAS (01.11.2016)
Published in Proceedings of the National Academy of Sciences - PNAS (01.11.2016)
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Journal Article
Synthesis of a Far-Red Photoactivatable Silicon-Containing Rhodamine for Super-Resolution Microscopy
Grimm, Jonathan B., Klein, Teresa, Kopek, Benjamin G., Shtengel, Gleb, Hess, Harald F., Sauer, Markus, Lavis, Luke D.
Published in Angewandte Chemie (International ed.) (26.01.2016)
Published in Angewandte Chemie (International ed.) (26.01.2016)
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Journal Article
Semisynthetic fluorescent pH sensors for imaging exocytosis and endocytosis
Martineau, Magalie, Somasundaram, Agila, Grimm, Jonathan B, Gruber, Todd D, Choquet, Daniel, Taraska, Justin W, Lavis, Luke D, Perrais, David
Published in Nature communications (10.11.2017)
Published in Nature communications (10.11.2017)
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Journal Article
3D imaging of Sox2 enhancer clusters in embryonic stem cells
Liu, Zhe, Legant, Wesley R, Chen, Bi-Chang, Li, Li, Grimm, Jonathan B, Lavis, Luke D, Betzig, Eric, Tjian, Robert
Published in eLife (24.12.2014)
Published in eLife (24.12.2014)
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Journal Article
Time-tagged ticker tapes for intracellular recordings
Lin, Dingchang, Li, Xiuyuan, Moult, Eric, Park, Pojeong, Tang, Benjamin, Shen, Hao, Grimm, Jonathan B, Falco, Natalie, Jia, Bill Z, Baker, David, Lavis, Luke D, Cohen, Adam E
Published in Nature biotechnology (01.05.2023)
Published in Nature biotechnology (01.05.2023)
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Journal Article
RNA Polymerase II cluster dynamics predict mRNA output in living cells
Cho, Won-Ki, Jayanth, Namrata, English, Brian P, Inoue, Takuma, Andrews, J Owen, Conway, William, Grimm, Jonathan B, Spille, Jan-Hendrik, Lavis, Luke D, Lionnet, Timothée, Cisse, Ibrahim I
Published in eLife (03.05.2016)
Published in eLife (03.05.2016)
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Journal Article
Quantifying transcription factor binding dynamics at the single-molecule level in live cells
Presman, Diego M., Ball, David A., Paakinaho, Ville, Grimm, Jonathan B., Lavis, Luke D., Karpova, Tatiana S., Hager, Gordon L.
Published in Methods (San Diego, Calif.) (01.07.2017)
Published in Methods (San Diego, Calif.) (01.07.2017)
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Journal Article
General Synthetic Method for Si-Fluoresceins and Si-Rhodamines
Grimm, Jonathan B, Brown, Timothy A, Tkachuk, Ariana N, Lavis, Luke D
Published in ACS central science (27.09.2017)
Published in ACS central science (27.09.2017)
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Journal Article
Carbofluoresceins and Carborhodamines as Scaffolds for High-Contrast Fluorogenic Probes
Grimm, Jonathan B, Sung, Andrew J, Legant, Wesley R, Hulamm, Phuson, Matlosz, Sylwia M, Betzig, Eric, Lavis, Luke D
Published in ACS chemical biology (21.06.2013)
Published in ACS chemical biology (21.06.2013)
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Journal Article
Rational Design of Fluorogenic and Spontaneously Blinking Labels for Super-Resolution Imaging
Zheng, Qinsi, Ayala, Anthony X, Chung, Inhee, Weigel, Aubrey V, Ranjan, Anand, Falco, Natalie, Grimm, Jonathan B, Tkachuk, Ariana N, Wu, Carl, Lippincott-Schwartz, Jennifer, Singer, Robert H, Lavis, Luke D
Published in ACS central science (25.09.2019)
Published in ACS central science (25.09.2019)
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Journal Article