Interactions between RNA polymerase and the "core recognition element" counteract pausing
Vvedenskaya, Irina O., Vahedian-Movahed, Hanif, Bird, Jeremy G., Knoblauch, Jared G., Goldman, Seth R., Zhang, Yu, Ebright, Richard H., Nickels, Bryce E.
Published in Science (American Association for the Advancement of Science) (13.06.2014)
Published in Science (American Association for the Advancement of Science) (13.06.2014)
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Journal Article
Massively Systematic Transcript End Readout, “MASTER”: Transcription Start Site Selection, Transcriptional Slippage, and Transcript Yields
Vvedenskaya, Irina O., Zhang, Yuanchao, Goldman, Seth R., Valenti, Anna, Visone, Valeria, Taylor, Deanne M., Ebright, Richard H., Nickels, Bryce E.
Published in Molecular cell (17.12.2015)
Published in Molecular cell (17.12.2015)
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Journal Article
A ubiquitous disordered protein interaction module orchestrates transcription elongation
Cermakova, Katerina, Demeulemeester, Jonas, Lux, Vanda, Nedomova, Monika, Goldman, Seth R, Smith, Eric A, Srb, Pavel, Hexnerova, Rozalie, Fabry, Milan, Madlikova, Marcela, Horejsi, Magdalena, De Rijck, Jan, Debyser, Zeger, Adelman, Karen, Hodges, H Courtney, Veverka, Vaclav
Published in Science (American Association for the Advancement of Science) (26.11.2021)
Published in Science (American Association for the Advancement of Science) (26.11.2021)
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Journal Article
NanoRNAs Prime Transcription Initiation In Vivo
Goldman, Seth R., Sharp, Josh S., Vvedenskaya, Irina O., Livny, Jonathan, Dove, Simon L., Nickels, Bryce E.
Published in Molecular cell (24.06.2011)
Published in Molecular cell (24.06.2011)
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Journal Article
A Conserved Pattern of Primer-Dependent Transcription Initiation in Escherichia coli and Vibrio cholerae Revealed by 5' RNA-seq
Druzhinin, Sergey Y, Tran, Ngat T, Skalenko, Kyle S, Goldman, Seth R, Knoblauch, Jared G, Dove, Simon L, Nickels, Bryce E
Published in PLoS genetics (01.07.2015)
Published in PLoS genetics (01.07.2015)
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Journal Article
The primary σ factor in Escherichia coli can access the transcription elongation complex from solution in vivo
Goldman, Seth R, Nair, Nikhil U, Wells, Christopher D, Nickels, Bryce E, Hochschild, Ann
Published in eLife (15.09.2015)
Published in eLife (15.09.2015)
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Journal Article
Inherited blood cancer predisposition through altered transcription elongation
Zhao, Jiawei, Cato, Liam D., Arora, Uma P., Bao, Erik L., Bryant, Samuel C., Williams, Nicholas, Jia, Yuemeng, Goldman, Seth R., Nangalia, Jyoti, Erb, Michael A., Vos, Seychelle M., Armstrong, Scott A., Sankaran, Vijay G.
Published in Cell (01.02.2024)
Published in Cell (01.02.2024)
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Journal Article
Rapid unleashing of macrophage efferocytic capacity via transcriptional pause release
Tufan, Turan, Comertpay, Gamze, Villani, Ambra, Nelson, Geoffrey M., Terekhova, Marina, Kelley, Shannon, Zakharov, Pavel, Ellison, Rochelle M., Shpynov, Oleg, Raymond, Michael, Sun, Jerry, Chen, Yitan, Bockelmann, Enno, Stremska, Marta, Peterson, Lance W., Boeckaerts, Laura, Goldman, Seth R., Etchegaray, J. Iker, Artyomov, Maxim N., Peri, Francesca, Ravichandran, Kodi S.
Published in Nature (London) (11.04.2024)
Published in Nature (London) (11.04.2024)
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Journal Article
Negative elongation factor regulates muscle progenitor expansion for efficient myofiber repair and stem cell pool repopulation
Robinson, Daniel C.L., Ritso, Morten, Nelson, Geoffrey M., Mokhtari, Zeinab, Nakka, Kiran, Bandukwala, Hina, Goldman, Seth R., Park, Peter J., Mounier, Rémi, Chazaud, Bénédicte, Brand, Marjorie, Rudnicki, Michael A., Adelman, Karen, Dilworth, F. Jeffrey
Published in Developmental cell (05.04.2021)
Published in Developmental cell (05.04.2021)
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Journal Article
Direct Detection of Abortive RNA Transcripts in Vivo
Goldman, Seth R, Ebright, Richard H, Nickels, Bryce E
Published in Science (American Association for the Advancement of Science) (15.05.2009)
Published in Science (American Association for the Advancement of Science) (15.05.2009)
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Journal Article
Transcription factor networks disproportionately enrich for heritability of blood cell phenotypes
Martin-Rufino, Jorge Diego, Caulier, Alexis, Lee, Seayoung, Castano, Nicole, King, Emily, Joubran, Samantha, Jones, Marcus, Goldman, Seth R, Arora, Uma P, Wahlster, Lara, Lander, Eric S, Sankaran, Vijay G
Published in bioRxiv (09.09.2024)
Published in bioRxiv (09.09.2024)
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Journal Article
Massively Systematic Transcript End Readout (MASTER): Transcription Start Site Selection, Transcriptional Slippage, and Transcript Yields
Vvedenskaya, Irina O., Zhang, Yuanchao, Goldman, Seth R., Valenti, Anna, Visone, Valeria, Taylor, Deanne M., Ebright, Richard H., Nickels, Bryce E.
Published in Molecular cell (25.11.2015)
Published in Molecular cell (25.11.2015)
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Journal Article
A Conserved Pattern of Primer-Dependent Transcription Initiation in Escherichia coli and Vibrio cholerae Revealed by 5' RNA-seq: e1005348
Druzhinin, Sergey Y, Tran, Ngat T, Skalenko, Kyle S, Goldman, Seth R, Knoblauch, Jared G, Dove, Simon L, Nickels, Bryce E
Published in PLoS genetics (01.07.2015)
Published in PLoS genetics (01.07.2015)
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Journal Article