Ecological Genomics of Marine Roseobacters
MORAN, M. A, BELAS, R, HOWARD, E. C, MEILE, C, PALEFSKY, W, GOESMANN, A, REN, Q, PAULSEN, I, ULRICH, L. E, THOMPSON, L. S, SAUNDERS, E, BUCHAN, A, SCHELL, M. A, GONZALEZ, J. M, SUN, F, SUN, S, BINDER, B. J, EDMONDS, J, YE, W, ORCUTT, B
Published in Applied and Environmental Microbiology (01.07.2007)
Published in Applied and Environmental Microbiology (01.07.2007)
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A review of bioinformatics platforms for comparative genomics. Recent developments of the EDGAR 2.0 platform and its utility for taxonomic and phylogenetic studies
Yu, J., Blom, J., Glaeser, S.P., Jaenicke, S., Juhre, T., Rupp, O., Schwengers, O., Spänig, S., Goesmann, A.
Published in Journal of biotechnology (10.11.2017)
Published in Journal of biotechnology (10.11.2017)
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Codon Usage Heterogeneity in the Multipartite Prokaryote Genome: Selection-Based Coding Bias Associated with Gene Location, Expression Level, and Ancestry
López, J L, Lozano, M J, Lagares, Jr, A, Fabre, M L, Draghi, W O, Del Papa, M F, Pistorio, M, Becker, A, Wibberg, D, Schlüter, A, Pühler, A, Blom, J, Goesmann, A, Lagares, A
Published in mBio (28.05.2019)
Published in mBio (28.05.2019)
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The genome sequence of Mycoplasma mycoides subsp mycoides SC type strain PG1(T), the causative agent of contagious bovine pleuropneumonia (CBPP)
Westberg, Joakim, Persson, Anja, Holmberg, Anders H., Goesmann, A., Lundeberg, Joakim, Johansson, K. E., Pettersson, Bertil, Uhlén, Mathias
Published in Genome research (01.02.2004)
Published in Genome research (01.02.2004)
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Complete sequence of Erwinia piriflorinigrans plasmids pEPIR37 and pEPIR5 and role of pEPIR37 in pathogen virulence
Barbé, S., Llop, P., Blom, J., Cabrefiga, J., Goesmann, A., Duffy, B., Montesinos, E., Smits, T. H. M., López, M. M.
Published in Plant pathology (01.08.2013)
Published in Plant pathology (01.08.2013)
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WS22.6 The Pseudomonas aeruginosa pangenome: Impact of genomic diversity on bacterial pathogenicity and host response in airway infections
Dethlefsen, S, Munder, A, Bezuidt, O, Fischer, S, Hilker, R, Klockgether, J, Voigt, B, Wiölbeling, F, Hecker, M, Goesmann, A, Gulbins, E, Tümmler, B
Published in Journal of cystic fibrosis (01.06.2013)
Published in Journal of cystic fibrosis (01.06.2013)
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CARMEN - Comparative Analysis and in silico Reconstruction of organism-specific MEtabolic Networks
Schneider, J, Vorhölter, F-J, Trost, E, Blom, J, Musa, Y R, Neuweger, H, Niehaus, K, Schatschneider, S, Tauch, A, Goesmann, A
Published in Genetics and molecular research (01.01.2010)
Published in Genetics and molecular research (01.01.2010)
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Insights into evolution from comparative genomics of Erwinia amylovora and related species
Smits, T.H.M, Rezzonico, F, Frey, J.E, Duffy, B, Blom, J, Goesmann, A
Published in Acta horticulturae (01.01.2011)
Published in Acta horticulturae (01.01.2011)
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BRIGEP—the BRIDGE-based genome–transcriptome–proteome browser
Goesmann, A., Linke, B., Bartels, D., Dondrup, M., Krause, L., Neuweger, H., Oehm, S., Paczian, T., Wilke, A., Meyer, F.
Published in Nucleic acids research (01.07.2005)
Published in Nucleic acids research (01.07.2005)
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genome sequence of Pantoea vagans biocontrol strain C9-1
Smits, T.H.M, Rezzonico, F, Pelludat, C, Kamber, T, Frey, J.E, Duffy, B, Goesmann, A, Ishimaru, C.A, Stockwell, V.O
Published in Acta horticulturae (01.01.2011)
Published in Acta horticulturae (01.01.2011)
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The metagenome of a biogas-producing microbial community of a production-scale biogas plant fermenter analysed by the 454-pyrosequencing technology
Schlüter, Andreas, Bekel, Thomas, Diaz, Naryttza N., Dondrup, Michael, Eichenlaub, Rudolf, Gartemann, Karl-Heinz, Krahn, Irene, Krause, Lutz, Krömeke, Holger, Kruse, Olaf, Mussgnug, Jan H., Neuweger, Heiko, Niehaus, Karsten, Pühler, Alfred, Runte, Kai J., Szczepanowski, Rafael, Tauch, Andreas, Tilker, Alexandra, Viehöver, Prisca, Goesmann, Alexander
Published in Journal of biotechnology (31.08.2008)
Published in Journal of biotechnology (31.08.2008)
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The Subsystems Approach to Genome Annotation and its Use in the Project to Annotate 1000 Genomes
Overbeek, Ross, Begley, Tadhg, Butler, Ralph M., Choudhuri, Jomuna V., Chuang, Han-Yu, Cohoon, Matthew, de Crécy-Lagard, Valérie, Diaz, Naryttza, Disz, Terry, Edwards, Robert, Fonstein, Michael, Frank, Ed D., Gerdes, Svetlana, Glass, Elizabeth M., Goesmann, Alexander, Hanson, Andrew, Iwata-Reuyl, Dirk, Jensen, Roy, Jamshidi, Neema, Krause, Lutz, Kubal, Michael, Larsen, Niels, Linke, Burkhard, McHardy, Alice C., Meyer, Folker, Neuweger, Heiko, Olsen, Gary, Olson, Robert, Osterman, Andrei, Portnoy, Vasiliy, Pusch, Gordon D., Rodionov, Dmitry A., Rückert, Christian, Steiner, Jason, Stevens, Rick, Thiele, Ines, Vassieva, Olga, Ye, Yuzhen, Zagnitko, Olga, Vonstein, Veronika
Published in Nucleic acids research (01.01.2005)
Published in Nucleic acids research (01.01.2005)
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Phylogenetic characterization of a biogas plant microbial community integrating clone library 16S-rDNA sequences and metagenome sequence data obtained by 454-pyrosequencing
Kröber, Magdalena, Bekel, Thomas, Diaz, Naryttza N., Goesmann, Alexander, Jaenicke, Sebastian, Krause, Lutz, Miller, Dimitri, Runte, Kai J., Viehöver, Prisca, Pühler, Alfred, Schlüter, Andreas
Published in Journal of biotechnology (01.06.2009)
Published in Journal of biotechnology (01.06.2009)
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GenDB—an open source genome annotation system for prokaryote genomes
Meyer, Folker, Goesmann, Alexander, McHardy, Alice C., Bartels, Daniela, Bekel, Thomas, Clausen, Jörn, Kalinowski, Jörn, Linke, Burkhard, Rupp, Oliver, Giegerich, Robert, Pühler, Alfred
Published in Nucleic acids research (15.04.2003)
Published in Nucleic acids research (15.04.2003)
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Correction: GABenchToB: a genome assembly benchmark tuned on bacteria and benchtop sequencers
Published in PloS one
(19.03.2015)
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Taxonomic composition and gene content of a methane-producing microbial community isolated from a biogas reactor
Krause, Lutz, Diaz, Naryttza N., Edwards, Robert A., Gartemann, Karl-Heinz, Krömeke, Holger, Neuweger, Heiko, Pühler, Alfred, Runte, Kai J., Schlüter, Andreas, Stoye, Jens, Szczepanowski, Rafael, Tauch, Andreas, Goesmann, Alexander
Published in Journal of biotechnology (31.08.2008)
Published in Journal of biotechnology (31.08.2008)
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Insights into Genome Plasticity and Pathogenicity of the Plant Pathogenic Bacterium Xanthomonas campestris pv. vesicatoria Revealed by the Complete Genome Sequence
THIEME, Frank, KOEBNIK, Ralf, KIRCHNER, Oliver, LANZ, Christa, LINKE, Burkhard, MCHARDY, Alice C, MEYER, Folker, MITTENHUBER, Gerhard, NIES, Dietrich H, NIESBACH-KLÖSGEN, Ulla, PATSCHKOWSKI, Thomas, RÜCKERT, Christian, BEKEL, Thomas, RUPP, Oliver, SCHNEIKER, Susanne, SCHUSTER, Stephan C, VORHÖLTER, Frank-Jörg, WEBER, Ernst, PÜHLER, Alfred, BONAS, Ulla, BARTELS, Daniela, KAISER, Olaf, BERGER, Carolin, BOCH, Jens, BÜTTNER, Daniela, CALDANA, Camila, GAIGALAT, Lars, GOESMANN, Alexander, KAY, Sabine
Published in Journal of Bacteriology (01.11.2005)
Published in Journal of Bacteriology (01.11.2005)
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The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of l-aspartate-derived amino acids and vitamins
Kalinowski, Jörn, Bathe, Brigitte, Bartels, Daniela, Bischoff, Nicole, Bott, Michael, Burkovski, Andreas, Dusch, Nicole, Eggeling, Lothar, Eikmanns, Bernhard J, Gaigalat, Lars, Goesmann, Alexander, Hartmann, Michael, Huthmacher, Klaus, Krämer, Reinhard, Linke, Burkhard, McHardy, Alice C, Meyer, Folker, Möckel, Bettina, Pfefferle, Walter, Pühler, Alfred, Rey, Daniel A, Rückert, Christian, Rupp, Oliver, Sahm, Hermann, Wendisch, Volker F, Wiegräbe, Iris, Tauch, Andreas
Published in Journal of biotechnology (04.09.2003)
Published in Journal of biotechnology (04.09.2003)
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A Predator Unmasked: Life Cycle of Bdellovibrio bacteriovorus from a Genomic Perspective
Rendulic, Snjezana, Jagtap, Pratik, Rosinus, Andrea, Eppinger, Mark, Baar, Claudia, Lanz, Christa, Keller, Heike, Lambert, Carey, Evans, Katy J., Goesmann, Alexander, Meyer, Folker, Sockett, R. Elizabeth, Schuster, Stephan C.
Published in Science (American Association for the Advancement of Science) (30.01.2004)
Published in Science (American Association for the Advancement of Science) (30.01.2004)
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