Skmer: assembly-free and alignment-free sample identification using genome skims
Sarmashghi, Shahab, Bohmann, Kristine, P Gilbert, M Thomas, Bafna, Vineet, Mirarab, Siavash
Published in Genome Biology (13.02.2019)
Published in Genome Biology (13.02.2019)
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Journal Article
Reconstructing ancient genomes and epigenomes
Orlando, Ludovic, Gilbert, M Thomas P, Willerslev, Eske
Published in Nature reviews. Genetics (01.07.2015)
Published in Nature reviews. Genetics (01.07.2015)
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Journal Article
Multiproxy evidence highlights a complex evolutionary legacy of maize in South America
Kistler, Logan, Maezumi, S Yoshi, Gregorio de Souza, Jonas, Przelomska, Natalia A S, Malaquias Costa, Flaviane, Smith, Oliver, Loiselle, Hope, Ramos-Madrigal, Jazmín, Wales, Nathan, Ribeiro, Eduardo Rivail, Morrison, Ryan R, Grimaldo, Claudia, Prous, Andre P, Arriaza, Bernardo, Gilbert, M Thomas P, de Oliveira Freitas, Fabio, Allaby, Robin G
Published in Science (American Association for the Advancement of Science) (14.12.2018)
Published in Science (American Association for the Advancement of Science) (14.12.2018)
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Journal Article
Monitoring endangered freshwater biodiversity using environmental DNA
THOMSEN, PHILIP FRANCIS, KIELGAST, JOS, IVERSEN, LARS L., WIUF, CARSTEN, RASMUSSEN, MORTEN, GILBERT, M. THOMAS P, ORLANDO, LUDOVIC, WILLERSLEV, ESKE
Published in Molecular ecology (01.06.2012)
Published in Molecular ecology (01.06.2012)
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Journal Article
Investigating the potential use of environmental DNA (eDNA) for genetic monitoring of marine mammals
Foote, Andrew D, Thomsen, Philip Francis, Sveegaard, Signe, Wahlberg, Magnus, Kielgast, Jos, Kyhn, Line A, Salling, Andreas B, Galatius, Anders, Orlando, Ludovic, Gilbert, M Thomas P
Published in PloS one (29.08.2012)
Published in PloS one (29.08.2012)
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Journal Article
Using paleo-archives to safeguard biodiversity under climate change
Fordham, Damien A, Jackson, Stephen T, Brown, Stuart C, Huntley, Brian, Brook, Barry W, Dahl-Jensen, Dorthe, Gilbert, M Thomas P, Otto-Bliesner, Bette L, Svensson, Anders, Theodoridis, Spyros, Wilmshurst, Janet M, Buettel, Jessie C, Canteri, Elisabetta, McDowell, Matthew, Orlando, Ludovic, Pilowsky, July A, Rahbek, Carsten, Nogues-Bravo, David
Published in Science (American Association for the Advancement of Science) (28.08.2020)
Published in Science (American Association for the Advancement of Science) (28.08.2020)
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Journal Article
mapDamage: testing for damage patterns in ancient DNA sequences
Ginolhac, Aurelien, Rasmussen, Morten, Gilbert, M. Thomas P., Willerslev, Eske, Orlando, Ludovic
Published in Bioinformatics (01.08.2011)
Published in Bioinformatics (01.08.2011)
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Journal Article
The use of coded PCR primers enables high-throughput sequencing of multiple homolog amplification products by 454 parallel sequencing
Binladen, Jonas, Gilbert, M Thomas P, Bollback, Jonathan P, Panitz, Frank, Bendixen, Christian, Nielsen, Rasmus, Willerslev, Eske
Published in PloS one (14.02.2007)
Published in PloS one (14.02.2007)
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Journal Article
Ancient and modern environmental DNA
Pedersen, Mikkel Winther, Overballe-Petersen, Søren, Ermini, Luca, Sarkissian, Clio Der, Haile, James, Hellstrom, Micaela, Spens, Johan, Thomsen, Philip Francis, Bohmann, Kristine, Cappellini, Enrico, Schnell, Ida Bærholm, Wales, Nathan A., Carøe, Christian, Campos, Paula F., Schmidt, Astrid M. Z., Gilbert, M. Thomas P., Hansen, Anders J., Orlando, Ludovic, Willerslev, Eske
Published in Philosophical transactions of the Royal Society of London. Series B. Biological sciences (19.01.2015)
Published in Philosophical transactions of the Royal Society of London. Series B. Biological sciences (19.01.2015)
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Journal Article
Arctic-adapted dogs emerged at the Pleistocene-Holocene transition
Sinding, Mikkel-Holger S, Gopalakrishnan, Shyam, Ramos-Madrigal, Jazmín, de Manuel, Marc, Pitulko, Vladimir V, Kuderna, Lukas, Feuerborn, Tatiana R, Frantz, Laurent A F, Vieira, Filipe G, Niemann, Jonas, Samaniego Castruita, Jose A, Carøe, Christian, Andersen-Ranberg, Emilie U, Jordan, Peter D, Pavlova, Elena Y, Nikolskiy, Pavel A, Kasparov, Aleksei K, Ivanova, Varvara V, Willerslev, Eske, Skoglund, Pontus, Fredholm, Merete, Wennerberg, Sanne Eline, Heide-Jørgensen, Mads Peter, Dietz, Rune, Sonne, Christian, Meldgaard, Morten, Dalén, Love, Larson, Greger, Petersen, Bent, Sicheritz-Pontén, Thomas, Bachmann, Lutz, Wiig, Øystein, Marques-Bonet, Tomas, Hansen, Anders J, Gilbert, M Thomas P
Published in Science (American Association for the Advancement of Science) (26.06.2020)
Published in Science (American Association for the Advancement of Science) (26.06.2020)
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Journal Article
Meta-barcoding of 'dirt' DNA from soil reflects vertebrate biodiversity
ANDERSEN, KENNETH, BIRD, KAREN LISE, RASMUSSEN, MORTEN, HAILE, JAMES, BREUNING-MADSEN, HENRIK, KJÆR, KURT H., ORLANDO, LUDOVIC, GILBERT, M. THOMAS P., WILLERSLEV, ESKE
Published in Molecular ecology (01.04.2012)
Published in Molecular ecology (01.04.2012)
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Journal Article
A Common Genetic Origin for Early Farmers from Mediterranean Cardial and Central European LBK Cultures
Olalde, Iñigo, Schroeder, Hannes, Sandoval-Velasco, Marcela, Vinner, Lasse, Lobón, Irene, Ramirez, Oscar, Civit, Sergi, García Borja, Pablo, Salazar-García, Domingo C, Talamo, Sahra, María Fullola, Josep, Xavier Oms, Francesc, Pedro, Mireia, Martínez, Pablo, Sanz, Montserrat, Daura, Joan, Zilhão, João, Marquès-Bonet, Tomàs, Gilbert, M Thomas P, Lalueza-Fox, Carles
Published in Molecular biology and evolution (01.12.2015)
Published in Molecular biology and evolution (01.12.2015)
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Journal Article
DNA extraction from dry museum beetles without conferring external morphological damage
Gilbert, M Thomas P, Moore, Wendy, Melchior, Linea, Worobey, Michael
Published in PloS one (07.03.2007)
Published in PloS one (07.03.2007)
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Journal Article
DNA metabarcoding and spatial modelling link diet diversification with distribution homogeneity in European bats
Alberdi, Antton, Razgour, Orly, Aizpurua, Ostaizka, Novella-Fernandez, Roberto, Aihartza, Joxerra, Budinski, Ivana, Garin, Inazio, Ibáñez, Carlos, Izagirre, Eñaut, Rebelo, Hugo, Russo, Danilo, Vlaschenko, Anton, Zhelyazkova, Violeta, Zrnčić, Vida, Gilbert, M Thomas P
Published in Nature communications (02.03.2020)
Published in Nature communications (02.03.2020)
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Journal Article
Plasmodium falciparum erythrocyte membrane protein 1 domain cassettes 8 and 13 are associated with severe malaria in children
Lavstsen, Thomas, Turner, Louise, Saguti, Fredy, Magistrado, Pamela, Rask, Thomas S, Jespersen, Jakob S, Wang, Christian W, Berger, Sanne S, Baraka, Vito, Marquard, Andrea M, Seguin-Orlando, Andaine, Willerslev, Eske, Gilbert, M. Thomas P, Lusingu, John, Theander, Thor G
Published in Proceedings of the National Academy of Sciences - PNAS (26.06.2012)
Published in Proceedings of the National Academy of Sciences - PNAS (26.06.2012)
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Journal Article
Bat Biology, Genomes, and the Bat1K Project: To Generate Chromosome-Level Genomes for All Living Bat Species
Teeling, Emma C, Vernes, Sonja C, Dávalos, Liliana M, Ray, David A, Gilbert, M. Thomas P, Myers, Eugene
Published in Annual review of animal biosciences (15.02.2018)
Published in Annual review of animal biosciences (15.02.2018)
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Journal Article
Bone biodeterioration-The effect of marine and terrestrial depositional environments on early diagenesis and bone bacterial community
Eriksen, Anne Marie Høier, Nielsen, Tue Kjærgaard, Matthiesen, Henning, Carøe, Christian, Hansen, Lars Hestbjerg, Gregory, David John, Turner-Walker, Gordon, Collins, Matthew James, Gilbert, M Thomas P
Published in PloS one (15.10.2020)
Published in PloS one (15.10.2020)
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Journal Article
Molecular clocks indicate turnover and diversification of modern coleoid cephalopods during the Mesozoic Marine Revolution
Tanner, Alastair R., Fuchs, Dirk, Winkelmann, Inger E., Gilbert, M. Thomas P., Pankey, M. Sabrina, Ribeiro, Ângela M., Kocot, Kevin M., Halanych, Kenneth M., Oakley, Todd H., da Fonseca, Rute R., Pisani, Davide, Vinther, Jakob
Published in Proceedings of the Royal Society. B, Biological sciences (15.03.2017)
Published in Proceedings of the Royal Society. B, Biological sciences (15.03.2017)
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Journal Article
Direct evidence of extensive diversity of HIV-1 in Kinshasa by 1960
Kabongo, Jean-Marie M, Kunstman, Kevin, Teuwen, Dirk E, Gilbert, M. Thomas P, Wolinsky, Steven M, Worobey, Michael, Gemmel, Marlea, Bunce, Michael, Kalengayi, Raphaël M, Muyembe, Jean-Jacques, Haselkorn, Tamara, Van Marck, Eric
Published in Nature (02.10.2008)
Published in Nature (02.10.2008)
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Journal Article
The isolation of nucleic acids from fixed, paraffin-embedded tissues-which methods are useful when?
Gilbert, M Thomas P, Haselkorn, Tamara, Bunce, Michael, Sanchez, Juan J, Lucas, Sebastian B, Jewell, Laurence D, Van Marck, Eric, Worobey, Michael
Published in PloS one (20.06.2007)
Published in PloS one (20.06.2007)
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