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Mraz, Marek, Chen, Liguang, Rassenti, Laura Z., Ghia, Emanuela M., Li, Hongying, Jepsen, Kristen, Smith, Erin N., Messer, Karen, Frazer, Kelly A., Kipps, Thomas J.
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Published in PLoS computational biology (01.03.2015)
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Transcriptomic Characterization of SF3B1 Mutation Reveals Its Pleiotropic Effects in Chronic Lymphocytic Leukemia
Wang, Lili, Brooks, Angela N., Fan, Jean, Wan, Youzhong, Gambe, Rutendo, Li, Shuqiang, Hergert, Sarah, Yin, Shanye, Freeman, Samuel S., Levin, Joshua Z., Fan, Lin, Seiler, Michael, Buonamici, Silvia, Smith, Peter G., Chau, Kevin F., Cibulskis, Carrie L., Zhang, Wandi, Rassenti, Laura Z., Ghia, Emanuela M., Kipps, Thomas J., Fernandes, Stacey, Bloch, Donald B., Kotliar, Dylan, Landau, Dan A., Shukla, Sachet A., Aster, Jon C., Reed, Robin, DeLuca, David S., Brown, Jennifer R., Neuberg, Donna, Getz, Gad, Livak, Kenneth J., Meyerson, Matthew M., Kharchenko, Peter V., Wu, Catherine J.
Published in Cancer cell (14.11.2016)
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Ovarian cancer stem cells express ROR1, which can be targeted for anti–cancer-stem-cell therapy
Zhang, Suping, Cui, Bing, Lai, Hsien, Liu, Grace, Ghia, Emanuela M., Widhopf, George F., Zhang, Zhuhong, Wu, Christina C. N., Chen, Liguang, Wu, Rongrong, Schwab, Richard, Carson, Dennis A., Kipps, Thomas J.
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Published in Proceedings of the National Academy of Sciences - PNAS (02.12.2014)
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Targeting the spliceosome in chronic lymphocytic leukemia with the macrolides FD-895 and pladienolide-B
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Efficient yeast ChIP-Seq using multiplex short-read DNA sequencing
Lefrançois, Philippe, Euskirchen, Ghia M, Auerbach, Raymond K, Rozowsky, Joel, Gibson, Theodore, Yellman, Christopher M, Gerstein, Mark, Snyder, Michael
Published in BMC genomics (21.01.2009)
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A Murine Model of Chronic Lymphocytic Leukemia Based on B Cell-Restricted Expression of Sf3b1 Mutation and Atm Deletion
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Melanoma and CLL co-occurrence and survival: role of KC history
Zhao, Yayi, Amorrortu, Rossybelle P, Stewart, Sandra C, Ghia, Kavita M, Williams, Vonetta L, Sondak, Vernon K, Tsai, Kenneth Y, Pinilla-Ibarz, Javier, Chavez, Julio C, Rollison, Dana E
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Published in BMC cancer (09.11.2023)
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Mapping of transcription factor binding regions in mammalian cells by ChIP: comparison of array- and sequencing-based technologies
Euskirchen, Ghia M, Rozowsky, Joel S, Wei, Chia-Lin, Lee, Wah Heng, Zhang, Zhengdong D, Hartman, Stephen, Emanuelsson, Olof, Stolc, Viktor, Weissman, Sherman, Gerstein, Mark B, Ruan, Yijun, Snyder, Michael
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Published in Genome Research (01.06.2007)
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A phase 1b study of zilovertamab in combination with paclitaxel for locally advanced/unresectable or metastatic Her2-negative breast cancer
Shatsky, Rebecca A, Batra-Sharma, Hemali, Helsten, Teresa, Schwab, Richard B, Pittman, Emily I, Pu, Minya, Weihe, Elizabeth, Ghia, Emanuela M, Rassenti, Laura Z, Molinolo, Alfredo, Cabrera, Betty, Breitmeyer, James B, Widhopf, 2nd, George F, Messer, Karen, Jamieson, Catriona, Kipps, Thomas J, Parker, Barbara A
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Published in Breast cancer research : BCR (26.02.2024)
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Correction: a phase 1b study of zilovertamab in combination with paclitaxel for locally advanced/unresectable or metastatic HER2-negative breast cancer
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Published in Breast cancer research : BCR (13.03.2024)
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Rapid electrokinetic isolation of cancer-related circulating cell-free DNA directly from blood
Sonnenberg, Avery, Marciniak, Jennifer Y, Rassenti, Laura, Ghia, Emanuela M, Skowronski, Elaine A, Manouchehri, Sareh, McCanna, James, Widhopf, 2nd, George F, Kipps, Thomas J, Heller, Michael J
Published in Clinical chemistry (Baltimore, Md.) (01.03.2014)
Published in Clinical chemistry (Baltimore, Md.) (01.03.2014)
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Immunoglobulin transcript sequence and somatic hypermutation computation from unselected RNA-seq reads in chronic lymphocytic leukemia
Blachly, James S., Ruppert, Amy S., Zhao, Weiqiang, Long, Susan, Flynn, Joseph, Flinn, Ian, Jones, Jeffrey, Maddocks, Kami, Andritsos, Leslie, Ghia, Emanuela M., Rassenti, Laura Z., Kipps, Thomas J., de la Chapelle, Albert, Byrd, John C.
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Published in Proceedings of the National Academy of Sciences - PNAS (07.04.2015)
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A genome-wide investigation of microRNA expression identifies biologically-meaningful microRNAs that distinguish between high-risk and low-risk intraductal papillary mucinous neoplasms of the pancreas
Permuth-Wey, Jennifer, Chen, Y Ann, Fisher, Kate, McCarthy, Susan, Qu, Xiaotao, Lloyd, Mark C, Kasprzak, Agnieszka, Fournier, Michelle, Williams, Vonetta L, Ghia, Kavita M, Yoder, Sean J, Hall, Laura, Georgeades, Christina, Olaoye, Funmilayo, Husain, Kazim, Springett, Gregory M, Chen, Dung-Tsa, Yeatman, Timothy, Centeno, Barbara Ann, Klapman, Jason, Coppola, Domenico, Malafa, Mokenge
Published in PloS one (21.01.2015)
Published in PloS one (21.01.2015)
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Aberrant spliceosome activity via elevated intron retention and upregulation and phosphorylation of SF3B1 in chronic lymphocytic leukemia
Kashyap, Manoj Kumar, Karathia, Hiren, Kumar, Deepak, Vera Alvarez, Roberto, Forero-Forero, Jose Vicente, Moreno, Eider, Lujan, Juliana Velez, Amaya-Chanaga, Carlos Ivan, Vidal, Newton Medeiros, Yu, Zhe, Ghia, Emanuela M., Lengerke-Diaz, Paula A., Achinko, Daniel, Choi, Michael Y., Rassenti, Laura Z., Mariño-Ramírez, Leonardo, Mount, Stephen M., Hannenhalli, Sridhar, Kipps, Thomas J., Castro, Januario E.
Published in Molecular therapy. Nucleic acids (11.06.2024)
Published in Molecular therapy. Nucleic acids (11.06.2024)
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