Highly multiplexed simultaneous detection of RNAs and proteins in single cells
Frei, Andreas P, Bava, Felice-Alessio, Zunder, Eli R, Hsieh, Elena W Y, Chen, Shih-Yu, Nolan, Garry P, Gherardini, Pier Federico
Published in Nature methods (01.03.2016)
Published in Nature methods (01.03.2016)
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Journal Article
High response rate to PD-1 blockade in desmoplastic melanomas
Eroglu, Zeynep, Zaretsky, Jesse M., Hu-Lieskovan, Siwen, Kim, Dae Won, Algazi, Alain, Johnson, Douglas B., Liniker, Elizabeth, Ben Kong, Munhoz, Rodrigo, Rapisuwon, Suthee, Gherardini, Pier Federico, Chmielowski, Bartosz, Wang, Xiaoyan, Shintaku, I. Peter, Wei, Cody, Sosman, Jeffrey A., Joseph, Richard W., Postow, Michael A., Carlino, Matteo S., Hwu, Wen-Jen, Scolyer, Richard A., Messina, Jane, Cochran, Alistair J., Long, Georgina V., Ribas, Antoni
Published in Nature (London) (18.01.2018)
Published in Nature (London) (18.01.2018)
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Journal Article
An interactive reference framework for modeling a dynamic immune system
Spitzer, Matthew H., Gherardini, Pier Federico, Fragiadakis, Gabriela K., Bhattacharya, Nupur, Yuan, Robert T., Hotson, Andrew N., Finck, Rachel, Carmi, Yaron, Zunder, Eli R., Fantl, Wendy J., Bendall, Sean C., Engleman, Edgar G., Nolan, Garry P.
Published in Science (American Association for the Advancement of Science) (10.07.2015)
Published in Science (American Association for the Advancement of Science) (10.07.2015)
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Journal Article
A Meta-Analysis Approach to Gene Regulatory Network Inference Identifies Key Regulators of Cardiovascular Diseases
Pepe, Gerardo, Appierdo, Romina, Ausiello, Gabriele, Helmer-Citterich, Manuela, Gherardini, Pier Federico
Published in International journal of molecular sciences (01.04.2024)
Published in International journal of molecular sciences (01.04.2024)
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Journal Article
AMBRA1 links autophagy to cell proliferation and tumorigenesis by promoting c-Myc dephosphorylation and degradation
Cianfanelli, Valentina, Fuoco, Claudia, Lorente, Mar, Salazar, Maria, Quondamatteo, Fabio, Gherardini, Pier Federico, De Zio, Daniela, Nazio, Francesca, Antonioli, Manuela, D’Orazio, Melania, Skobo, Tatjana, Bordi, Matteo, Rohde, Mikkel, Dalla Valle, Luisa, Helmer-Citterich, Manuela, Gretzmeier, Christine, Dengjel, Joern, Fimia, Gian Maria, Piacentini, Mauro, Di Bartolomeo, Sabrina, Velasco, Guillermo, Cecconi, Francesco
Published in Nature cell biology (01.01.2015)
Published in Nature cell biology (01.01.2015)
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Journal Article
Comprehensive Immune Monitoring of Clinical Trials to Advance Human Immunotherapy
Hartmann, Felix J., Babdor, Joel, Gherardini, Pier Federico, Amir, El-Ad D., Jones, Kyle, Sahaf, Bita, Marquez, Diana M., Krutzik, Peter, O’Donnell, Erika, Sigal, Natalia, Maecker, Holden T., Meyer, Everett, Spitzer, Matthew H., Bendall, Sean C.
Published in Cell reports (Cambridge) (16.07.2019)
Published in Cell reports (Cambridge) (16.07.2019)
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Journal Article
Deep Proteomics of Breast Cancer Cells Reveals that Metformin Rewires Signaling Networks Away from a Pro-growth State
Sacco, Francesca, Silvestri, Alessandra, Posca, Daniela, Pirrò, Stefano, Gherardini, Pier Federico, Castagnoli, Luisa, Mann, Matthias, Cesareni, Gianni
Published in Cell systems (23.03.2016)
Published in Cell systems (23.03.2016)
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Journal Article
Single-cell systems-level analysis of human Toll-like receptor activation defines a chemokine signature in patients with systemic lupus erythematosus
O'Gorman, William E., PhD, Hsieh, Elena W.Y., MD, Savig, Erica S., BA, Gherardini, Pier Federico, PhD, Hernandez, Joseph D., MD, PhD, Hansmann, Leo, PhD, Balboni, Imelda M., MD, PhD, Utz, Paul J., MD, PhD, Bendall, Sean C., PhD, Fantl, Wendy J., PhD, Lewis, David B., MD, Nolan, Garry P., PhD, Davis, Mark M., PhD
Published in Journal of allergy and clinical immunology (01.11.2015)
Published in Journal of allergy and clinical immunology (01.11.2015)
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Journal Article
GateFinder: projection-based gating strategy optimization for flow and mass cytometry
Aghaeepour, Nima, Simonds, Erin F, Knapp, David J H F, Bruggner, Robert V, Sachs, Karen, Culos, Anthony, Gherardini, Pier Federico, Samusik, Nikolay, Fragiadakis, Gabriela K, Bendall, Sean C, Gaudilliere, Brice, Angst, Martin S, Eaves, Connie J, Weiss, William A, Fantl, Wendy J, Nolan, Garry P
Published in Bioinformatics (01.12.2018)
Published in Bioinformatics (01.12.2018)
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Journal Article
High Dimensional Single-Cell Mass Cytometry Demonstrates Conserved Human Toll-Like-Receptor Activation Signatures
Hsieh, Elena, Dr, O'Gorman, William, Dr, Savig, Erica, Ms, Gherardini, Pier Federico, Dr, Davis, Mark, Prof, Nolan, Garry, Prof
Published in Journal of allergy and clinical immunology (01.02.2014)
Published in Journal of allergy and clinical immunology (01.02.2014)
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Journal Article
Identification of nucleotide-binding sites in protein structures: a novel approach based on nucleotide modularity
Parca, Luca, Gherardini, Pier Federico, Truglio, Mauro, Mangone, Iolanda, Ferrè, Fabrizio, Helmer-Citterich, Manuela, Ausiello, Gabriele
Published in PloS one (27.11.2012)
Published in PloS one (27.11.2012)
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Journal Article
FunClust: a web server for the identification of structural motifs in a set of non-homologous protein structures
Ausiello, Gabriele, Gherardini, Pier Federico, Marcatili, Paolo, Tramontano, Anna, Via, Allegra, Helmer-Citterich, Manuela
Published in BMC bioinformatics (26.03.2008)
Published in BMC bioinformatics (26.03.2008)
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Journal Article
PhosTryp: a phosphorylation site predictor specific for parasitic protozoa of the family trypanosomatidae
Palmeri, Antonio, Gherardini, Pier Federico, Tsigankov, Polina, Ausiello, Gabriele, Späth, Gerald F, Zilberstein, Dan, Helmer-Citterich, Manuela
Published in BMC genomics (19.12.2011)
Published in BMC genomics (19.12.2011)
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Journal Article
Erratum: Corrigendum: AMBRA1 links autophagy to cell proliferation and tumorigenesis by promoting c-Myc dephosphorylation and degradation
Cianfanelli, Valentina, Fuoco, Claudia, Lorente, Mar, Salazar, Maria, Quondamatteo, Fabio, Gherardini, Pier Federico, De Zio, Daniela, Nazio, Francesca, Antonioli, Manuela, D'Orazio, Melania, Skobo, Tatjana, Bordi, Matteo, Rohde, Mikkel, Valle, Luisa Dalla, Helmer-Citterich, Manuela, Gretzmeier, Christine, Dengjel, Joern, Fimia, Gian Maria, Piacentini, Mauro, Di Bartolomeo, Sabrina, Velasco, Guillermo, Cecconi, Francesco
Published in Nature cell biology (30.04.2015)
Published in Nature cell biology (30.04.2015)
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Journal Article
생물학적 샘플을 분석하기 위한 시스템 및 방법
AGAH ALI, YASAR FILIZ GORPE, KHURANA TARUN KUMAR, GHERARDINI PIER FEDERICO, WU YIR SHYUAN
Year of Publication 14.02.2024
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Year of Publication 14.02.2024
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