rpoB, a promising marker for analyzing the diversity of bacterial communities by amplicon sequencing
Ogier, Jean-Claude, Pagès, Sylvie, Galan, Maxime, Barret, Matthieu, Gaudriault, Sophie
Published in BMC microbiology (29.07.2019)
Published in BMC microbiology (29.07.2019)
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Journal Article
Estimation of population allele frequencies from next-generation sequencing data: pool-versus individual-based genotyping
Gautier, Mathieu, Foucaud, Julien, Gharbi, Karim, Cézard, Timothée, Galan, Maxime, Loiseau, Anne, Thomson, Marian, Pudlo, Pierre, Kerdelhué, Carole, Estoup, Arnaud
Published in Molecular ecology (01.07.2013)
Published in Molecular ecology (01.07.2013)
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Journal Article
Deciphering host-parasitoid interactions and parasitism rates of crop pests using DNA metabarcoding
Sow, Ahmadou, Brévault, Thierry, Benoit, Laure, Chapuis, Marie-Pierre, Galan, Maxime, Coeur d’acier, Armelle, Delvare, Gérard, Sembène, Mbacké, Haran, Julien
Published in Scientific reports (06.03.2019)
Published in Scientific reports (06.03.2019)
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Journal Article
In silico and empirical evaluation of twelve metabarcoding primer sets for insectivorous diet analyses
Tournayre, Orianne, Leuchtmann, Maxime, Filippi‐Codaccioni, Ondine, Trillat, Marine, Piry, Sylvain, Pontier, Dominique, Charbonnel, Nathalie, Galan, Maxime
Published in Ecology and evolution (01.07.2020)
Published in Ecology and evolution (01.07.2020)
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Journal Article
Genetic epidemiology of the Alpine ibex reservoir of persistent and virulent brucellosis outbreak
Quéméré, Erwan, Rossi, Sophie, Petit, Elodie, Marchand, Pascal, Merlet, Joël, Game, Yvette, Galan, Maxime, Gilot-Fromont, Emmanuelle
Published in Scientific reports (10.03.2020)
Published in Scientific reports (10.03.2020)
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Journal Article
DNA Metabarcoding as a Tool for Disentangling Food Webs in Agroecosystems
Sow, Ahmadou, Haran, Julien, Benoit, Laure, Galan, Maxime, Brévault, Thierry
Published in Insects (Basel, Switzerland) (11.05.2020)
Published in Insects (Basel, Switzerland) (11.05.2020)
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Journal Article
16S rRNA Amplicon Sequencing for Epidemiological Surveys of Bacteria in Wildlife
Galan, Maxime, Razzauti, Maria, Bard, Emilie, Bernard, Maria, Brouat, Carine, Charbonnel, Nathalie, Dehne-Garcia, Alexandre, Loiseau, Anne, Tatard, Caroline, Tamisier, Lucie, Vayssier-Taussat, Muriel, Vignes, Helene, Cosson, Jean-François
Published in mSystems (01.07.2016)
Published in mSystems (01.07.2016)
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Journal Article
Differential immune gene expression associated with contemporary range expansion in two invasive rodents in Senegal
Charbonnel, Nathalie, Galan, Maxime, Tatard, Caroline, Loiseau, Anne, Diagne, Christophe, Dalecky, Ambroise, Parrinello, Hugues, Rialle, Stephanie, Severac, Dany, Brouat, Carine
Published in Scientific reports (26.10.2020)
Published in Scientific reports (26.10.2020)
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Journal Article
Cytonuclear discordance among Southeast Asian black rats (Rattus rattus complex)
Pagès, Marie, Bazin, Eric, Galan, Maxime, Chaval, Yannick, Claude, Julien, herbreteau, Vincent, Michaux, Johan, Piry, Sylvain, Morand, Serge, Cosson, Jean-François
Published in Molecular ecology (01.02.2013)
Published in Molecular ecology (01.02.2013)
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Web Resource
A Comparison between Transcriptome Sequencing and 16S Metagenomics for Detection of Bacterial Pathogens in Wildlife
Razzauti, Maria, Galan, Maxime, Bernard, Maria, Maman, Sarah, Klopp, Christophe, Charbonnel, Nathalie, Vayssier-Taussat, Muriel, Eloit, Marc, Cosson, Jean-François
Published in PLoS neglected tropical diseases (01.08.2015)
Published in PLoS neglected tropical diseases (01.08.2015)
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Journal Article
Spatial Patterns of Neutral and Functional Genetic Variations along Dendritic Networks of Riverscape in Brown Trout Populations
Gouthier, Laurine, Duval, Eloïse, Blanchet, Simon, Loot, Géraldine, Veyssière, Charlotte, Galan, Maxime, Quéméré, Erwan, Jacquin, Lisa
Published in Diversity (Basel) (01.06.2023)
Published in Diversity (Basel) (01.06.2023)
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Journal Article
Spatio-temporal trends in richness and persistence of bacterial communities in decline-phase water vole populations
Villette, Petra, Afonso, Eve, Couval, Geoffroy, Levret, Aurélien, Galan, Maxime, Goydadin, Anne-Claude, Cosson, Jean-François, Giraudoux, Patrick
Published in Scientific reports (11.06.2020)
Published in Scientific reports (11.06.2020)
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Journal Article
eDNA metabarcoding reveals a core and secondary diets of the greater horseshoe bat with strong spatio‐temporal plasticity
Tournayre, Orianne, Leuchtmann, Maxime, Galan, Maxime, Trillat, Marine, Piry, Sylvain, Pinaud, David, Filippi‐Codaccioni, Ondine, Pontier, Dominique, Charbonnel, Nathalie
Published in Environmental DNA (Hoboken, N.J.) (01.01.2021)
Published in Environmental DNA (Hoboken, N.J.) (01.01.2021)
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Journal Article
Exploring the potential effects of forest urbanization on the interplay between small mammal communities and their gut microbiota
Bouilloud, Marie, Galan, Maxime, Pradel, Julien, Loiseau, Anne, Ferrero, Julien, Gallet, Romain, Roche, Benjamin, Charbonnel, Nathalie
Published in Animal microbiome (25.03.2024)
Published in Animal microbiome (25.03.2024)
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Journal Article
Detection of Orientia sp. DNA in rodents from Asia, West Africa and Europe
Cosson, Jean François, Galan, Maxime, Bard, Emilie, Razzauti, Maria, Bernard, Maria, Morand, Serge, Brouat, Carine, Dalecky, Ambroise, Bâ, Khalilou, Charbonnel, Nathalie, Vayssier-Taussat, Muriel
Published in Parasites & vectors (21.03.2015)
Published in Parasites & vectors (21.03.2015)
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Journal Article
Increasing helminth infection burden depauperates the diversity of the gut microbiota and alters its composition in mice
Guiver, Emmanuel, Galan, Maxime, Lippens, Cédric, Bellenger, Jérôme, Faivre, Bruno, Sorci, Gabriele
Published in Current research in parasitology & vector-borne diseases (01.01.2022)
Published in Current research in parasitology & vector-borne diseases (01.01.2022)
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Journal Article
Global parasite and Rattus rodent invasions: The consequences for rodent-borne diseases
MORAND, Serge, BORDES, Frédéric, CHEN, Hsuan-Wien, CLAUDE, Julien, COSSON, Jean-François, GALAN, Maxime, CZIRJÁK, Gábor Á, GREENWOOD, Alex D, LATINNE, Alice, MICHAUX, Johan, RIBAS, Alexis
Published in Integrative zoology (01.09.2015)
Published in Integrative zoology (01.09.2015)
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Genetic characterization of the human relapsing fever spirochete Borrelia miyamotoi in vectors and animal reservoirs of Lyme disease spirochetes in France
Cosson, Jean-François, Michelet, Lorraine, Chotte, Julien, Le Naour, Evelyne, Cote, Martine, Devillers, Elodie, Poulle, Marie-Lazarine, Huet, Dominique, Galan, Maxime, Geller, Julia, Moutailler, Sara, Vayssier-Taussat, Muriel
Published in Parasites & vectors (20.05.2014)
Published in Parasites & vectors (20.05.2014)
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Journal Article