Dynamic changes in histone acetylation regulate origins of DNA replication
Unnikrishnan, Ashwin, Tsukiyama, Toshio, Gafken, Philip R
Published in Nature structural & molecular biology (01.04.2010)
Published in Nature structural & molecular biology (01.04.2010)
Get full text
Journal Article
Biomarker Panel for Chronic Graft-Versus-Host Disease
Yu, Jeffrey, Storer, Barry E, Kushekhar, Kushi, Abu Zaid, Mohammad, Zhang, Qing, Gafken, Philip R, Ogata, Yuko, Martin, Paul J, Flowers, Mary E, Hansen, John A, Arora, Mukta, Cutler, Corey, Jagasia, Madan, Pidala, Joseph, Hamilton, Betty K, Chen, George L, Pusic, Iskra, Lee, Stephanie J, Paczesny, Sophie
Published in Journal of clinical oncology (01.08.2016)
Published in Journal of clinical oncology (01.08.2016)
Get full text
Journal Article
A targeted proteomics-based pipeline for verification of biomarkers in plasma
Paulovich, Amanda G, Whiteaker, Jeffrey R, Lin, Chenwei, Kennedy, Jacob, Hou, Liming, Trute, Mary, Sokal, Izabela, Yan, Ping, Schoenherr, Regine M, Zhao, Lei, Voytovich, Uliana J, Kelly-Spratt, Karen S, Krasnoselsky, Alexei, Gafken, Philip R, Hogan, Jason M, Jones, Lisa A, Wang, Pei, Amon, Lynn, Chodosh, Lewis A, Nelson, Peter S, McIntosh, Martin W, Kemp, Christopher J
Published in Nature biotechnology (01.07.2011)
Published in Nature biotechnology (01.07.2011)
Get full text
Journal Article
Myc-dependent Mitochondrial Generation of Acetyl-CoA Contributes to Fatty Acid Biosynthesis and Histone Acetylation during Cell Cycle Entry
Morrish, Fionnuala, Noonan, Jhoanna, Perez-Olsen, Carissa, Gafken, Philip R., Fitzgibbon, Matthew, Kelleher, Joanne, VanGilst, Marc, Hockenbery, David
Published in The Journal of biological chemistry (19.11.2010)
Published in The Journal of biological chemistry (19.11.2010)
Get full text
Journal Article
Validated graft-specific biomarkers identify patients at risk for chronic graft-versus-host disease and death
Logan, Brent R, Fu, Denggang, Howard, Alan, Fei, Mingwei, Kou, Jianqun, Little, Morgan R, Adom, Djamilatou, Mohamed, Fathima A, Blazar, Bruce R, Gafken, Philip R, Paczesny, Sophie
Published in The Journal of clinical investigation (01.08.2023)
Published in The Journal of clinical investigation (01.08.2023)
Get full text
Journal Article
Quantitative proteomics reveals key roles for post-transcriptional gene regulation in the molecular pathology of facioscapulohumeral muscular dystrophy
Jagannathan, Sujatha, Ogata, Yuko, Gafken, Philip R, Tapscott, Stephen J, Bradley, Robert K
Published in eLife (15.01.2019)
Published in eLife (15.01.2019)
Get full text
Journal Article
Identification of long-lived proteins retained in cells undergoing repeated asymmetric divisions
Thayer, Nathaniel H., Leverich, Christina K., Fitzgibbon, Matthew P., Nelson, Zara W., Henderson, Kiersten A., Gafken, Philip R., Hsu, Jessica J., Gottschling, Daniel E.
Published in Proceedings of the National Academy of Sciences - PNAS (30.09.2014)
Published in Proceedings of the National Academy of Sciences - PNAS (30.09.2014)
Get full text
Journal Article
Ubiquitination-Linked Phosphorylation of the FANCI S/TQ Cluster Contributes to Activation of the Fanconi Anemia I/D2 Complex
Cheung, Ronald S., Castella, Maria, Abeyta, Antonio, Gafken, Philip R., Tucker, Nyka, Taniguchi, Toshiyasu
Published in Cell reports (Cambridge) (20.06.2017)
Published in Cell reports (Cambridge) (20.06.2017)
Get full text
Journal Article
Multiplex Targeted Proteomic Assay for Biomarker Detection in Plasma: A Pancreatic Cancer Biomarker Case Study
Pan, Sheng, Chen, Ru, Brand, Randall E, Hawley, Sarah, Tamura, Yasuko, Gafken, Philip R, Milless, Brian P, Goodlett, David R, Rush, John, Brentnall, Teresa A
Published in Journal of proteome research (02.03.2012)
Published in Journal of proteome research (02.03.2012)
Get full text
Journal Article
Murine chronic graft-versus-host disease proteome profiling discovers CCL15 as a novel biomarker in patients
Du, Jing, Flynn, Ryan, Paz, Katelyn, Ren, Hong-Gang, Ogata, Yuko, Zhang, Qing, Gafken, Philip R., Storer, Barry E., Roy, Nathan H., Burkhardt, Janis K., Mathews, Wendy, Tolar, Jakub, Lee, Stephanie J., Blazar, Bruce R., Paczesny, Sophie
Published in Blood (12.04.2018)
Published in Blood (12.04.2018)
Get full text
Journal Article
ARTEMIS: A Novel Mass-Spec Platform for HLA-Restricted Self and Disease-Associated Peptide Discovery
Finton, Kathryn A K, Brusniak, Mi-Youn, Jones, Lisa A, Lin, Chenwei, Fioré-Gartland, Andrew J, Brock, Chance, Gafken, Philip R, Strong, Roland K
Published in Frontiers in immunology (23.04.2021)
Published in Frontiers in immunology (23.04.2021)
Get full text
Journal Article
Cyclic Rhamnosylated Elongation Factor P Establishes Antibiotic Resistance in Pseudomonas aeruginosa
Rajkovic, Andrei, Erickson, Sarah, Witzky, Anne, Branson, Owen E, Seo, Jin, Gafken, Philip R, Frietas, Michael A, Whitelegge, Julian P, Faull, Kym F, Navarre, William, Darwin, Andrew J, Ibba, Michael
Published in mBio (09.06.2015)
Published in mBio (09.06.2015)
Get full text
Journal Article
DGCR8 Mediates Repair of UV-Induced DNA Damage Independently of RNA Processing
Calses, Philamer C, Dhillon, Kiranjit K, Tucker, Nyka, Chi, Yong, Huang, Jen-Wei, Kawasumi, Masaoki, Nghiem, Paul, Wang, Yemin, Clurman, Bruce E, Jacquemont, Celine, Gafken, Philip R, Sugasawa, Kaoru, Saijo, Masafumi, Taniguchi, Toshiyasu
Published in Cell reports (Cambridge) (04.04.2017)
Published in Cell reports (Cambridge) (04.04.2017)
Get full text
Journal Article
Kinetic Analysis of BCL11B Multisite Phosphorylation–Dephosphorylation and Coupled Sumoylation in Primary Thymocytes by Multiple Reaction Monitoring Mass Spectroscopy
Vogel, Walter K, Gafken, Philip R, Leid, Mark, Filtz, Theresa M
Published in Journal of proteome research (05.12.2014)
Published in Journal of proteome research (05.12.2014)
Get full text
Journal Article
Discovery and Validation of a Compound to Target Ewing's Sarcoma
Esfandiari Nazzaro, Ellie, Sabei, Fahad Y, Vogel, Walter K, Nazari, Mohamad, Nicholson, Katelyn S, Gafken, Philip R, Taratula, Olena, Taratula, Oleh, Davare, Monika A, Leid, Mark
Published in Pharmaceutics (24.09.2021)
Published in Pharmaceutics (24.09.2021)
Get full text
Journal Article
Modifications of IL‑6 by Hypochlorous Acids: Effects on Receptor Binding
Robins, Lori I, Keim, Erika K, Robins, Deborah B, Edgar, John S, Meschke, John S, Gafken, Philip R, Williams, Jeffrey F
Published in ACS omega (28.12.2021)
Published in ACS omega (28.12.2021)
Get full text
Journal Article
Ubiquitin Proteasome-Mediated Synaptic Reorganization: A Novel Mechanism Underlying Rapid Ischemic Tolerance
Meller, Robert, Thompson, Simon John, Lusardi, Theresa Ann, Ordonez, Andrea Nicole, Ashley, Michelle Dawn, Jessick, Veronica, Wang, Weihzen, Torrey, Daniel John, Henshall, David Clifford, Gafken, Philip R, Saugstad, Julie Anne, Xiong, Zhi-Gang, Simon, Roger Pancoast
Published in The Journal of neuroscience (02.01.2008)
Published in The Journal of neuroscience (02.01.2008)
Get full text
Journal Article
NFX1-123 and Poly(A) Binding Proteins Synergistically Augment Activation of Telomerase in Human Papillomavirus Type 16 E6-Expressing Cells
KATZENELLENBOGEN, Rachel A, EGELKROUT, Erin M, VLIET-GREGG, Portia, GEWIN, Lindy C, GAFKEN, Philip R, GALLOWAY, Denise A
Published in Journal of Virology (01.04.2007)
Published in Journal of Virology (01.04.2007)
Get full text
Journal Article