PRODIGEN: visualizing the probability landscape of stochastic gene regulatory networks in state and time space
Ma, Chihua, Luciani, Timothy, Terebus, Anna, Liang, Jie, Marai, G Elisabeta
Published in BMC bioinformatics (15.02.2017)
Published in BMC bioinformatics (15.02.2017)
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Journal Article
Head and neck cancer predictive risk estimator to determine control and therapeutic outcomes of radiotherapy (HNC-PREDICTOR): development, international multi-institutional validation, and web implementation of clinic-ready model-based risk stratification for head and neck cancer
van Dijk, Lisanne V., Mohamed, Abdallah SR, Ahmed, Sara, Nipu, Nafiul, Marai, G. Elisabeta, Wahid, Kareem, Sijtsema, Nanna M., Gunn, Brandon, Garden, Adam S., Moreno, Amy, Hope, Andrew J., Langendijk, Johannes A., Fuller, Clifton D.
Published in European journal of cancer (1990) (01.01.2023)
Published in European journal of cancer (1990) (01.01.2023)
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Journal Article
Enhancing biomedical search interfaces with images
Trelles Trabucco, Juan, Arighi, Cecilia, Shatkay, Hagit, Marai, G Elisabeta
Published in Bioinformatics advances (2023)
Published in Bioinformatics advances (2023)
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Journal Article
Multi-organ spatial stratification of 3-D dose distributions improves risk prediction of long-term self-reported severe symptoms in oropharyngeal cancer patients receiving radiotherapy: development of a pre-treatment decision support tool
Wentzel, Andrew, Mohamed, Abdallah S R, Naser, Mohamed A, van Dijk, Lisanne V, Hutcheson, Katherine, Moreno, Amy M, Fuller, Clifton D, Canahuate, Guadalupe, Marai, G Elisabeta
Published in Frontiers in oncology (08.08.2023)
Published in Frontiers in oncology (08.08.2023)
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Journal Article
MOSBIE: a tool for comparison and analysis of rule-based biochemical models
Wenskovitch, Jr, John E, Harris, Leonard A, Tapia, Jose-Juan, Faeder, James R, Marai, G Elisabeta
Published in BMC bioinformatics (25.09.2014)
Published in BMC bioinformatics (25.09.2014)
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Journal Article
A spatial neighborhood methodology for computing and analyzing lymph node carcinoma similarity in precision medicine
Luciani, T., Wentzel, A., Elgohari, B., Elhalawani, H., Mohamed, A., Canahuate, G., Vock, D.M., Fuller, C.D., Marai, G.E.
Published in Journal of biomedical informatics (01.01.2020)
Published in Journal of biomedical informatics (01.01.2020)
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Journal Article
Highlights from the 5th Symposium on Biological Data Visualization: Part 1
Aerts, Jan, Marai, G Elisabeta, Nieselt, Kay, Nielsen, Cydney, Streit, Marc, Weiskopf, Daniel
Published in BMC bioinformatics (13.08.2015)
Published in BMC bioinformatics (13.08.2015)
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Journal Article
Machine Learning Applications in Head and Neck Radiation Oncology: Lessons From Open-Source Radiomics Challenges
Elhalawani, Hesham, Lin, Timothy A, Volpe, Stefania, Mohamed, Abdallah S R, White, Aubrey L, Zafereo, James, Wong, Andrew J, Berends, Joel E, AboHashem, Shady, Williams, Bowman, Aymard, Jeremy M, Kanwar, Aasheesh, Perni, Subha, Rock, Crosby D, Cooksey, Luke, Campbell, Shauna, Yang, Pei, Nguyen, Khahn, Ger, Rachel B, Cardenas, Carlos E, Fave, Xenia J, Sansone, Carlo, Piantadosi, Gabriele, Marrone, Stefano, Liu, Rongjie, Huang, Chao, Yu, Kaixian, Li, Tengfei, Yu, Yang, Zhang, Youyi, Zhu, Hongtu, Morris, Jeffrey S, Baladandayuthapani, Veerabhadran, Shumway, John W, Ghosh, Alakonanda, Pöhlmann, Andrei, Phoulady, Hady A, Goyal, Vibhas, Canahuate, Guadalupe, Marai, G Elisabeta, Vock, David, Lai, Stephen Y, Mackin, Dennis S, Court, Laurence E, Freymann, John, Farahani, Keyvan, Kaplathy-Cramer, Jayashree, Fuller, Clifton D
Published in Frontiers in oncology (17.08.2018)
Published in Frontiers in oncology (17.08.2018)
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Journal Article
Large-Scale Overlays and Trends: Visually Mining, Panning and Zooming the Observable Universe
Luciani, Timothy Basil, Cherinka, Brian, Oliphant, Daniel, Myers, Sean, Wood-Vasey, W Michael, Labrinidis, Alexandros, Marai, G Elisabeta
Published in IEEE transactions on visualization and computer graphics (01.07.2014)
Published in IEEE transactions on visualization and computer graphics (01.07.2014)
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Journal Article
Visual Analysis of a Smart City’s Energy Consumption
Trelles Trabucco, Juan, Lee, Dongwoo, Derrible, Sybil, Marai, G. Elisabeta
Published in Multimodal technologies and interaction (01.06.2019)
Published in Multimodal technologies and interaction (01.06.2019)
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Journal Article
RULEBENDER: a visual interface for rule-based modeling
WEN XU, SMITH, Adam M, FAEDER, James R, MARAI, G. Elisabeta
Published in Bioinformatics (Oxford, England) (15.06.2011)
Published in Bioinformatics (Oxford, England) (15.06.2011)
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Journal Article
GRACE: A Visual Comparison Framework for Integrated Spatial and Non-Spatial Geriatric Data
Maries, Adrian, Mays, Nathan, Hunt, Megan Olson, Wong, Kim F., Layton, William, Boudreau, Robert, Rosano, Caterina, Marai, G. Elisabeta
Published in IEEE transactions on visualization and computer graphics (01.12.2013)
Published in IEEE transactions on visualization and computer graphics (01.12.2013)
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Journal Article
Evaluating the Effect of Right-Censored End Point Transformation for Radiomic Feature Selection of Data From Patients With Oropharyngeal Cancer
Zdilar, Luka, Vock, David M, Marai, G Elisabeta, Fuller, Clifton D, Mohamed, Abdallah S R, Elhalawani, Hesham, Elgohari, Baher Ahmed, Tiras, Carly, Miller, Austin, Canahuate, Guadalupe
Published in JCO clinical cancer informatics (01.12.2018)
Published in JCO clinical cancer informatics (01.12.2018)
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Journal Article
Echo: A large display interactive visualization of ICU data for effective care handoffs
Thomas, Manu Mathew, Kannampallil, Thomas, Abraham, Joanna, Marai, G. Elisabeta
Published in 2017 IEEE Workshop on Visual Analytics in Healthcare (VAHC) (01.10.2017)
Published in 2017 IEEE Workshop on Visual Analytics in Healthcare (VAHC) (01.10.2017)
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Conference Proceeding
Journal Article
Predicting late symptoms of head and neck cancer treatment using LSTM and patient reported outcomes
Wang, Yaohua, Van Dijk, Lisanne, Mohamed, Abdallah S R, Fuller, Clifton David, Zhang, Xinhua, Marai, G Elisabeta, Canahuate, Guadalupe
Published in Proceedings - International Database Engineering and Applications Symposium (01.07.2021)
Published in Proceedings - International Database Engineering and Applications Symposium (01.07.2021)
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Journal Article
Hierarchical model-based tracking of cervical vertebrae from dynamic biplane radiographs
Haque, Md. Abedul, Anderst, William, Tashman, Scott, Marai, G. Elisabeta
Published in Medical engineering & physics (01.07.2013)
Published in Medical engineering & physics (01.07.2013)
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Journal Article
MOTIV: Visual Exploration of Moral Framing in Social Media
Wentzel, A., Levine, L., Dhariwal, V., Fatemi, Z., Bhattacharya, A., Eugenio, B. Di, Rojecki, A., Zheleva, E., Marai, G.E.
Published in Computer graphics forum (01.09.2024)
Published in Computer graphics forum (01.09.2024)
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Journal Article