Lessons from a ten-year-long journey: building a student-driven computational biology society across Turkey [version 1; peer review: not peer reviewed]
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Published in F1000 research (2022)
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The chromatin remodeller ATRX facilitates diverse nuclear processes, in a stochastic manner, in both heterochromatin and euchromatin
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Published in Nature communications (17.06.2022)
Published in Nature communications (17.06.2022)
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GTAC enables parallel genotyping of multiple genomic loci with chromatin accessibility profiling in single cells
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Published in Cell stem cell (04.05.2023)
Published in Cell stem cell (04.05.2023)
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CATCH-UP: A High-Throughput Upstream-Pipeline for Bulk ATAC-Seq and ChIP-Seq Data
Riva, Simone G, Georgiades, Emily, Gur, E Ravza, Baxter, Matthew, Hughes, Jim R
Published in Journal of visualized experiments (22.09.2023)
Published in Journal of visualized experiments (22.09.2023)
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A Multiomic Single-Cell Atlas of Human Myelopoiesis Reveals Cellular and Molecular Drivers of Immunomodulatory Drug-Induced Neutropenia
Simoglou Karali, Christina, Riva, Simone, Clark, Sally-Ann, Wen, Sean, Sousos, Nikolaos, Louka, Eleni, Gür, E. Ravza, Hayder, Nawshad, Pierceall, William E., Thakurta, Anjan, Gandhi, Anita K., Hagner, Patrick R, Hughes, Jim, Mead, Adam J
Published in Blood (02.11.2023)
Published in Blood (02.11.2023)
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Genotyping of Multiple Genomic Loci with Chromatin Accessibility Profiling in Single Cells Links Clonal Hierarchy with Epigenetic Variation in Acute Myeloid Leukemia
Turkalj, Sven, Jakobsen, Niels Asger, Groom, Angus, Metzner, Marlen, Usukhbayar, Batchimeg, Angulo Salazar, Mirian, Clark, Kevin, Gür, E. Ravza, Hentges, Lance D., Sopp, Paul, Davies, James O.J., Hughes, Jim R., Vyas, Paresh
Published in Blood (15.11.2022)
Published in Blood (15.11.2022)
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