Structure-function relationship between soluble epoxide hydrolases structure and their tunnel network
Mitusińska, Karolina, Wojsa, Piotr, Bzówka, Maria, Raczyńska, Agata, Bagrowska, Weronika, Samol, Aleksandra, Kapica, Patryk, Góra, Artur
Published in Computational and structural biotechnology journal (01.01.2022)
Published in Computational and structural biotechnology journal (01.01.2022)
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Journal Article
Structural and Evolutionary Analysis Indicate That the SARS-CoV-2 Mpro Is a Challenging Target for Small-Molecule Inhibitor Design
Bzówka, Maria, Mitusińska, Karolina, Raczyńska, Agata, Samol, Aleksandra, Tuszyński, Jack A, Góra, Artur
Published in International journal of molecular sciences (28.04.2020)
Published in International journal of molecular sciences (28.04.2020)
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Journal Article
Recent Advances in Studying Toll-like Receptors with the Use of Computational Methods
Bzówka, Maria, Bagrowska, Weronika, Góra, Artur
Published in Journal of chemical information and modeling (26.06.2023)
Published in Journal of chemical information and modeling (26.06.2023)
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Journal Article
Computational insights into the known inhibitors of human soluble epoxide hydrolase
Bzówka, Maria, Mitusińska, Karolina, Hopko, Katarzyna, Góra, Artur
Published in Drug discovery today (01.08.2021)
Published in Drug discovery today (01.08.2021)
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Journal Article
Transient binding sites at the surface of haloalkane dehalogenase LinB as locations for fine-tuning enzymatic activity
Raczyńska, Agata, Kapica, Patryk, Papaj, Katarzyna, Stańczak, Agnieszka, Shyntum, Divine, Spychalska, Patrycja, Byczek-Wyrostek, Anna, Góra, Artur
Published in PloS one (24.02.2023)
Published in PloS one (24.02.2023)
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Journal Article
CAVER 3.0: a tool for the analysis of transport pathways in dynamic protein structures
Chovancova, Eva, Pavelka, Antonin, Benes, Petr, Strnad, Ondrej, Brezovsky, Jan, Kozlikova, Barbora, Gora, Artur, Sustr, Vilem, Klvana, Martin, Medek, Petr, Biedermannova, Lada, Sochor, Jiri, Damborsky, Jiri
Published in PLoS computational biology (01.10.2012)
Published in PLoS computational biology (01.10.2012)
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Journal Article
Evolution of tunnels in α/β-hydrolase fold proteins-What can we learn from studying epoxide hydrolases?
Bzówka, Maria, Mitusińska, Karolina, Raczyńska, Agata, Skalski, Tomasz, Samol, Aleksandra, Bagrowska, Weronika, Magdziarz, Tomasz, Góra, Artur
Published in PLoS computational biology (01.05.2022)
Published in PLoS computational biology (01.05.2022)
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Journal Article
Simple Selection Procedure to Distinguish between Static and Flexible Loops
Mitusińska, Karolina, Skalski, Tomasz, Góra, Artur
Published in International journal of molecular sciences (26.03.2020)
Published in International journal of molecular sciences (26.03.2020)
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Journal Article
Effects of γ-polyglutamic acid on grassland sandy soil properties and plant functional traits exposed to drought stress
Skalski, Tomasz, Zając, Ewelina, Jędrszczyk, Elżbieta, Papaj, Katarzyna, Kohyt, Joanna, Góra, Artur, Kasprzycka, Anna, Shytum, Divine, Skowera, Barbara, Ziernicka-Wojtaszek, Agnieszka
Published in Scientific reports (14.02.2024)
Published in Scientific reports (14.02.2024)
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Journal Article
Evaluation of Xa inhibitors as potential inhibitors of the SARS-CoV-2 Mpro protease
Papaj, Katarzyna, Spychalska, Patrycja, Kapica, Patryk, Fischer, André, Nowak, Jakub, Bzówka, Maria, Sellner, Manuel, Lill, Markus A, Smieško, Martin, Góra, Artur
Published in PloS one (11.01.2022)
Published in PloS one (11.01.2022)
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Journal Article
AQUA-DUCT 1.0: structural and functional analysis of macromolecules from an intramolecular voids perspective
Magdziarz, Tomasz, Mitusińska, Karolina, Bzówka, Maria, Raczyńska, Agata, Stańczak, Agnieszka, Banas, Michał, Bagrowska, Weronika, Góra, Artur
Published in Bioinformatics (15.04.2020)
Published in Bioinformatics (15.04.2020)
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Journal Article
PBP-A, a cyanobacterial dd-peptidase with high specificity for amidated muropeptides, exhibits pH-dependent promiscuous activity harmful to Escherichia coli
Dorrazehi, Gol Mohammad, Winkle, Matthias, Desmet, Martin, Stroobant, Vincent, Tanriver, Gamze, Degand, Hervé, Evrard, Damien, Desguin, Benoît, Morsomme, Pierre, Biboy, Jacob, Gray, Joe, Mitusińska, Karolina, Góra, Artur, Vollmer, Waldemar, Soumillion, Patrice
Published in Scientific reports (18.06.2024)
Published in Scientific reports (18.06.2024)
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Journal Article
CAVER Analyst 1.0: graphic tool for interactive visualization and analysis of tunnels and channels in protein structures
Kozlikova, Barbora, Sebestova, Eva, Sustr, Vilem, Brezovsky, Jan, Strnad, Ondrej, Daniel, Lukas, Bednar, David, Pavelka, Antonin, Manak, Martin, Bezdeka, Martin, Benes, Petr, Kotry, Matus, Gora, Artur, Damborsky, Jiri, Sochor, Jiri
Published in Bioinformatics (Oxford, England) (15.09.2014)
Published in Bioinformatics (Oxford, England) (15.09.2014)
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Modulating D-amino acid oxidase (DAAO) substrate specificity through facilitated solvent access
Subramanian, Kalyanasundaram, Góra, Artur, Spruijt, Ruud, Mitusińska, Karolina, Suarez-Diez, Maria, Martins Dos Santos, Vitor, Schaap, Peter J
Published in PloS one (15.06.2018)
Published in PloS one (15.06.2018)
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Journal Article
BALCONY: an R package for MSA and functional compartments of protein variability analysis
Płuciennik, Alicja, Stolarczyk, Michał, Bzówka, Maria, Raczyńska, Agata, Magdziarz, Tomasz, Góra, Artur
Published in BMC bioinformatics (14.08.2018)
Published in BMC bioinformatics (14.08.2018)
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Journal Article
AQUA-DUCT: a ligands tracking tool
Magdziarz, Tomasz, Mitusinska, Karolina, Goldowska, Sandra, Pluciennik, Alicja, Stolarczyk, Michal, Lugowska, Magdalena, Góra, Artur
Published in Bioinformatics (Oxford, England) (01.07.2017)
Published in Bioinformatics (Oxford, England) (01.07.2017)
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