Simulating Multilevel Dynamics of Antimicrobial Resistance in a Membrane Computing Model
Campos, Marcelino, Capilla, Rafael, Naya, Fernando, Futami, Ricardo, Coque, Teresa, Moya, Andrés, Fernandez-Lanza, Val, Cantón, Rafael, Sempere, José M, Llorens, Carlos, Baquero, Fernando
Published in mBio (29.01.2019)
Published in mBio (29.01.2019)
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Journal Article
Client Applications and Server-Side Docker for Management of RNASeq and/or VariantSeq Workflows and Pipelines of the GPRO Suite
Hafez, Ahmed Ibrahem, Soriano, Beatriz, Elsayed, Aya Allah, Futami, Ricardo, Ceprian, Raquel, Ramos-Ruiz, Ricardo, Martinez, Genis, Roig, Francisco Jose, Torres-Font, Miguel Angel, Naya-Catala, Fernando, Calduch-Giner, Josep Alvar, Trilla-Fuertes, Lucia, Gamez-Pozo, Angelo, Arnau, Vicente, Sempere-Luna, Jose Maria, Perez-Sanchez, Jaume, Gabaldon, Toni, Llorens, Carlos
Published in Genes (19.01.2023)
Published in Genes (19.01.2023)
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Bioinformatic flowchart and database to investigate the origins and diversity of clan AA peptidases
Llorens, Carlos, Futami, Ricardo, Renaud, Gabriel, Moya, Andrés
Published in Biology direct (27.01.2009)
Published in Biology direct (27.01.2009)
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Journal Article
GyDB Mobilomics: LTR retroelements and integrase-related transposons of the Pea aphid Acyrthosiphon pisum genome
Bernet, Guillermo P., Muñoz-Pomer, Alfonso, Domínguez-Escribá, Laura, Covelli, Laura, Bernad, Lucía, Ramasamy, Sukanya, Futami, Ricardo, Sempere, Jose M., Moya, Andrés, Llorens, Carlos
Published in Mobile genetic elements (01.07.2011)
Published in Mobile genetic elements (01.07.2011)
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Journal Article
SeqEditor: an application for primer design and sequence analysis with or without GTF/GFF files
Hafez, Ahmed, Futami, Ricardo, Arastehfar, Amir, Daneshnia, Farnaz, Miguel, Ana, Roig, Francisco J., Soriano, Beatriz, Perez-Sánchez, Jaume, Boekhout, Teun, Gabaldón, Toni, Llorens, Carlos
Published in Bioinformatics (Oxford, England) (12.07.2021)
Published in Bioinformatics (Oxford, England) (12.07.2021)
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Journal Article
Gypsy Database (GyDB) of mobile genetic elements: release 2.0
Llorens, Carlos, Futami, Ricardo, Covelli, Laura, Domínguez-Escribá, Laura, Viu, Jose M, Tamarit, Daniel, Aguilar-Rodríguez, Jose, Vicente-Ripolles, Miguel, Fuster, Gonzalo, Bernet, Guillermo P, Maumus, Florian, Munoz-Pomer, Alfonso, Sempere, Jose M, Latorre, Amparo, Moya, Andres
Published in Nucleic acids research (01.01.2011)
Published in Nucleic acids research (01.01.2011)
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Journal Article
A membrane computing simulator of trans-hierarchical antibiotic resistance evolution dynamics in nested ecological compartments (ARES)
Campos, Marcelino, Llorens, Carlos, Sempere, José M, Futami, Ricardo, Rodriguez, Irene, Carrasco, Purificación, Capilla, Rafael, Latorre, Amparo, Coque, Teresa M, Moya, Andres, Baquero, Fernando
Published in Biology direct (05.08.2015)
Published in Biology direct (05.08.2015)
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Journal Article
GyDB mobilomics: LTR retroelements and integrase-related transposons of the pea aphid
Bernet, Guillermo P, Muñoz-Pomer, Alfonso, Domínguez-Escribá, Laura, Covelli, Laura, Bernad, Lucía, Ramasamy, Sukanya, Futami, Ricardo, Sempere, Jose M, Moya, Andrés, Llorens, Carlos
Published in Mobile genetic elements (01.01.2011)
Published in Mobile genetic elements (01.01.2011)
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Journal Article
Client applications and Server Side docker for management of RNASeq and/or VariantSeq workflows and pipelines of the GPRO Suite
Hafez, Ahmed, Soriano, Beatriz, Elsayed, Aya A, Futami, Ricardo, Ceprian, Raquel, Ramos-Ruiz, Ricardo, Martinez, Genis, Roig, Francisco J, Torres-Font, Miguel A, Naya-Català, Fernando, Josep Alvar Calduch-Giner, Trilla-Fuertes, Lucia, Gamez-Pozo, Angelo, Arnau, Vicente, Sempere, Jose M, Perez-Sánchez, Jaume, Gabaldón, Toni, Llorens, Carlos
Published in arXiv.org (19.11.2022)
Published in arXiv.org (19.11.2022)
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Paper
Journal Article
Simulating multi-level dynamics of antimicrobial resistance in a membrane computing model
Campos, Marcelino, Capilla, Rafael, Llorens, Carlos, Canton, Rafael, Moya, Andres, Jose-Maria Sempere, Coque, Teresa, Fernandez-Lanza, Val, Naya, Fernando, Futami, Ricardo, Baquero, Fernando
Published in bioRxiv (16.11.2018)
Published in bioRxiv (16.11.2018)
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Paper
The gypsy database (GyDB) of mobile genetic elements: release 2.0
Futami, Ricardo, Covelli, Laura, Dominguez-Escriba, Laura, Viu, Jose M, Tamarit, Daniel, Aguilar-Rodriguez, Jose, Vicente-Ripolles, Miguel, Fuster, Gonzalo, Bernet, Guillermo P, Maumus, Florian, Munoz-Pomer, Alfonso, Sempere, Jose M, Latorre, Amparo, Moya, Andres
Published in Nucleic Acids Research S1 (39), D70-D74. (2011) (2011)
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Published in Nucleic Acids Research S1 (39), D70-D74. (2011) (2011)
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The gypsy database (GyDB) of mobile genetic elements: release 2.0
Futami, Ricardo, Covelli, Laura, Dominguez-Escriba, Laura, Viu, Jose M, Tamarit, Daniel, Aguilar-Rodriguez, Jose, Vicente-Ripolles, Miguel, Fuster, Gonzalo, Bernet, Guillermo P, Maumus, Florian, Munoz-Pomer, Alfonso, Sempere, Jose M, Latorre, Amparo, Moya, Andres
Published in Nucleic Acids Research S1 (39), D70-D74. (2011) (2011)
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Published in Nucleic Acids Research S1 (39), D70-D74. (2011) (2011)
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