PartitionFinder 2: New Methods for Selecting Partitioned Models of Evolution for Molecular and Morphological Phylogenetic Analyses
Lanfear, Robert, Frandsen, Paul B, Wright, April M, Senfeld, Tereza, Calcott, Brett
Published in Molecular biology and evolution (01.03.2017)
Published in Molecular biology and evolution (01.03.2017)
Get full text
Journal Article
Toward a genome sequence for every animal: Where are we now?
Hotaling, Scott, Kelley, Joanna L., Frandsen, Paul B.
Published in Proceedings of the National Academy of Sciences - PNAS (28.12.2021)
Published in Proceedings of the National Academy of Sciences - PNAS (28.12.2021)
Get full text
Journal Article
Representation and participation across 20 years of plant genome sequencing
Marks, Rose A., Hotaling, Scott, Frandsen, Paul B., VanBuren, Robert
Published in Nature plants (01.12.2021)
Published in Nature plants (01.12.2021)
Get full text
Journal Article
Phylogenomics reveals the evolutionary timing and pattern of butterflies and moths
Kawahara, Akito Y., Plotkin, David, Espeland, Marianne, Meusemann, Karen, Toussaint, Emmanuel F. A., Donath, Alexander, Gimnich, France, Frandsen, Paul B., Zwick, Andreas, dos Reis, Mario, Barber, Jesse R., Peters, Ralph S., Liu, Shanlin, Zhou, Xin, Mayer, Christoph, Podsiadlowski, Lars, Storer, Caroline, Yack, Jayne E., Misof, Bernhard, Breinholt, Jesse W.
Published in Proceedings of the National Academy of Sciences - PNAS (05.11.2019)
Published in Proceedings of the National Academy of Sciences - PNAS (05.11.2019)
Get full text
Journal Article
Deep learning as a tool for ecology and evolution
Borowiec, Marek L., Dikow, Rebecca B., Frandsen, Paul B., McKeeken, Alexander, Valentini, Gabriele, White, Alexander E.
Published in Methods in ecology and evolution (01.08.2022)
Published in Methods in ecology and evolution (01.08.2022)
Get full text
Journal Article
A multigene phylogeny and timeline for Trichoptera (Insecta)
Thomas, Jessica A., Frandsen, Paul B., Prendini, Elizabeth, Zhou, Xin, Holzenthal, Ralph W.
Published in Systematic entomology (01.07.2020)
Published in Systematic entomology (01.07.2020)
Get full text
Journal Article
Evolutionary history of Polyneoptera and its implications for our understanding of early winged insects
Wipfler, Benjamin, Letsch, Harald, Frandsen, Paul B., Kapli, Paschalia, Mayer, Christoph, Bartel, Daniela, Buckley, Thomas R., Donath, Alexander, Edgerly-Rooks, Janice S., Fujita, Mari, Liu, Shanlin, Machida, Ryuichiro, Mashimo, Yuta, Misof, Bernhard, Niehuis, Oliver, Peters, Ralph S., Petersen, Malte, Podsiadlowski, Lars, Schütte, Kai, Shimizu, Shota, Uchifune, Toshiki, Wilbrandt, Jeanne, Yan, Evgeny, Zhou, Xin, Simon, Sabrina
Published in Proceedings of the National Academy of Sciences - PNAS (19.02.2019)
Published in Proceedings of the National Academy of Sciences - PNAS (19.02.2019)
Get full text
Journal Article
Diversity and Ecosystem Services of Trichoptera
Morse, John C, Frandsen, Paul B, Graf, Wolfram, Thomas, Jessica A
Published in Insects (Basel, Switzerland) (01.05.2019)
Published in Insects (Basel, Switzerland) (01.05.2019)
Get full text
Journal Article
Long Reads Are Revolutionizing 20 Years of Insect Genome Sequencing
Hotaling, Scott, Sproul, John S, Heckenhauer, Jacqueline, Powell, Ashlyn, Larracuente, Amanda M, Pauls, Steffen U, Kelley, Joanna L, Frandsen, Paul B
Published in Genome biology and evolution (03.08.2021)
Published in Genome biology and evolution (03.08.2021)
Get full text
Journal Article
Highly accurate long reads are crucial for realizing the potential of biodiversity genomics
Hotaling, Scott, Wilcox, Edward R, Heckenhauer, Jacqueline, Stewart, Russell J, Frandsen, Paul B
Published in BMC genomics (16.03.2023)
Published in BMC genomics (16.03.2023)
Get full text
Journal Article
The underground network: facilitation in soil bacteria
Jorna, Jesse, Adams, Byron J., Aanderud, Zachary T., Frandsen, Paul B., Takacs‐Vesbach, Cristina, Kéfi, Sonia
Published in Oikos (01.08.2024)
Published in Oikos (01.08.2024)
Get full text
Journal Article
Phylogeny and classification of Odonata using targeted genomics
Bybee, Seth M., Kalkman, Vincent J., Erickson, Robert J., Frandsen, Paul B., Breinholt, Jesse W., Suvorov, Anton, Dijkstra, Klaas-Douwe B., Cordero-Rivera, Adolfo, Skevington, Jeffrey H., Abbott, John C., Sanchez Herrera, Melissa, Lemmon, Alan R., Moriarty Lemmon, Emily, Ware, Jessica L.
Published in Molecular phylogenetics and evolution (01.07.2021)
Published in Molecular phylogenetics and evolution (01.07.2021)
Get full text
Journal Article
Analyses of 600+ insect genomes reveal repetitive element dynamics and highlight biodiversity-scale repeat annotation challenges
Sproul, John S., Hotaling, Scott, Heckenhauer, Jacqueline, Powell, Ashlyn, Marshall, Dez, Larracuente, Amanda M., Kelley, Joanna L., Pauls, Steffen U., Frandsen, Paul B.
Published in Genome research (01.10.2023)
Published in Genome research (01.10.2023)
Get full text
Journal Article
Aquatic Insects Are Dramatically Underrepresented in Genomic Research
Hotaling, Scott, Kelley, Joanna L, Frandsen, Paul B
Published in Insects (Basel, Switzerland) (05.09.2020)
Published in Insects (Basel, Switzerland) (05.09.2020)
Get full text
Journal Article
Exploring chromosome evolution in 250 million year old groups of dragonflies and damselflies (Insecta:Odonata)
Tolman, Ethan R, Beatty, Christopher D, Bush, Jonas, Kohli, Manpreet K, Frandsen, Paul B, Gosnell, J Stephen, Ware, Jessica L
Published in Molecular ecology (01.11.2023)
Published in Molecular ecology (01.11.2023)
Get full text
Journal Article
Combining molecular datasets with strongly heterogeneous taxon coverage enlightens the peculiar biogeographic history of stoneflies (Insecta: Plecoptera)
Letsch, Harald, Simon, Sabrina, Frandsen, Paul B., Liu, Shanlin, Machida, Ryuichiro, Mayer, Christoph, Misof, Bernhard, Niehuis, Oliver, Zhou, Xin, Wipfler, Benjamin
Published in Systematic entomology (01.10.2021)
Published in Systematic entomology (01.10.2021)
Get full text
Journal Article
Allelic resolution of insect and spider silk genes reveals hidden genetic diversity
Frandsen, Paul B, Hotaling, Scott, Powell, Ashlyn, Heckenhauer, Jacqueline, Kawahara, Akito Y, Baker, Richard H, Hayashi, Cheryl Y, Ríos-Touma, Blanca, Holzenthal, Ralph, Pauls, Steffen U, Stewart, Russell J
Published in Proceedings of the National Academy of Sciences - PNAS (02.05.2023)
Published in Proceedings of the National Academy of Sciences - PNAS (02.05.2023)
Get full text
Journal Article
Exploring the underwater silken architectures of caddisworms: comparative silkomics across two caddisfly suborders
Frandsen, Paul B, Bursell, Madeline G, Taylor, Adam M, Wilson, Seth B, Steeneck, Amy, Stewart, Russell J
Published in Philosophical transactions of the Royal Society of London. Series B. Biological sciences (28.10.2019)
Published in Philosophical transactions of the Royal Society of London. Series B. Biological sciences (28.10.2019)
Get full text
Journal Article