eggNOG 5.0: a hierarchical, functionally and phylogenetically annotated orthology resource based on 5090 organisms and 2502 viruses
Huerta-Cepas, Jaime, Szklarczyk, Damian, Heller, Davide, Hernández-Plaza, Ana, Forslund, Sofia K, Cook, Helen, Mende, Daniel R, Letunic, Ivica, Rattei, Thomas, Jensen, Lars J, von Mering, Christian, Bork, Peer
Published in Nucleic acids research (08.01.2019)
Published in Nucleic acids research (08.01.2019)
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Gut Microbiome Composition in Obese and Non-Obese Persons: A Systematic Review and Meta-Analysis
Pinart, Mariona, Dötsch, Andreas, Schlicht, Kristina, Laudes, Matthias, Bouwman, Jildau, Forslund, Sofia K, Pischon, Tobias, Nimptsch, Katharina
Published in Nutrients (21.12.2021)
Published in Nutrients (21.12.2021)
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Short-Chain Fatty Acid Propionate Protects From Hypertensive Cardiovascular Damage
Bartolomaeus, Hendrik, Balogh, András, Yakoub, Mina, Homann, Susanne, Markó, Lajos, Höges, Sascha, Tsvetkov, Dmitry, Krannich, Alexander, Wundersitz, Sebastian, Avery, Ellen G, Haase, Nadine, Kräker, Kristin, Hering, Lydia, Maase, Martina, Kusche-Vihrog, Kristina, Grandoch, Maria, Fielitz, Jens, Kempa, Stefan, Gollasch, Maik, Zhumadilov, Zhaxybay, Kozhakhmetov, Samat, Kushugulova, Almagul, Eckardt, Kai-Uwe, Dechend, Ralf, Rump, Lars Christian, Forslund, Sofia K, Müller, Dominik N, Stegbauer, Johannes, Wilck, Nicola
Published in Circulation (New York, N.Y.) (12.03.2019)
Published in Circulation (New York, N.Y.) (12.03.2019)
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Structure and function of the global topsoil microbiome
Bahram, Mohammad, Hildebrand, Falk, Forslund, Sofia K., Anderson, Jennifer L., Soudzilovskaia, Nadejda A., Bodegom, Peter M., Bengtsson-Palme, Johan, Anslan, Sten, Coelho, Luis Pedro, Harend, Helery, Huerta-Cepas, Jaime, Medema, Marnix H., Maltz, Mia R., Mundra, Sunil, Olsson, Pål Axel, Pent, Mari, Põlme, Sergei, Sunagawa, Shinichi, Ryberg, Martin, Tedersoo, Leho, Bork, Peer
Published in Nature (London) (01.08.2018)
Published in Nature (London) (01.08.2018)
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Metabolomic and microbiome profiling reveals personalized risk factors for coronary artery disease
Talmor-Barkan, Yeela, Bar, Noam, Shaul, Aviv A., Shahaf, Nir, Godneva, Anastasia, Bussi, Yuval, Lotan-Pompan, Maya, Weinberger, Adina, Shechter, Alon, Chezar-Azerrad, Chava, Arow, Ziad, Hammer, Yoav, Chechi, Kanta, Forslund, Sofia K., Fromentin, Sebastien, Dumas, Marc-Emmanuel, Ehrlich, S. Dusko, Pedersen, Oluf, Kornowski, Ran, Segal, Eran
Published in Nature Medicine (01.02.2022)
Published in Nature Medicine (01.02.2022)
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Magazine Article
The Gut Microbiome in Hypertension: Recent Advances and Future Perspectives
Avery, Ellen G, Bartolomaeus, Hendrik, Maifeld, Andras, Marko, Lajos, Wiig, Helge, Wilck, Nicola, Rosshart, Stephan P, Forslund, Sofia K, Müller, Dominik N
Published in Circulation research (02.04.2021)
Published in Circulation research (02.04.2021)
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Unravelling the collateral damage of antibiotics on gut bacteria
Maier, Lisa, Goemans, Camille V., Wirbel, Jakob, Kuhn, Michael, Eberl, Claudia, Pruteanu, Mihaela, Müller, Patrick, Garcia-Santamarina, Sarela, Cacace, Elisabetta, Zhang, Boyao, Gekeler, Cordula, Banerjee, Tisya, Anderson, Exene Erin, Milanese, Alessio, Löber, Ulrike, Forslund, Sofia K., Patil, Kiran Raosaheb, Zimmermann, Michael, Stecher, Bärbel, Zeller, Georg, Bork, Peer, Typas, Athanasios
Published in Nature (London) (04.11.2021)
Published in Nature (London) (04.11.2021)
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Journal Article
Advances and Applications in the Quest for Orthologs
Glover, Natasha, Dessimoz, Christophe, Ebersberger, Ingo, Forslund, Sofia K, Gabaldón, Toni, Huerta-Cepas, Jaime, Martin, Maria-Jesus, Muffato, Matthieu, Patricio, Mateus, Pereira, Cécile, da Silva, Alan Sousa, Wang, Yan, Sonnhammer, Erik, Thomas, Paul D
Published in Molecular biology and evolution (01.10.2019)
Published in Molecular biology and evolution (01.10.2019)
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Journal Article
Conference Proceeding
Fasting alters the gut microbiome reducing blood pressure and body weight in metabolic syndrome patients
Maifeld, András, Bartolomaeus, Hendrik, Löber, Ulrike, Avery, Ellen G., Steckhan, Nico, Markó, Lajos, Wilck, Nicola, Hamad, Ibrahim, Šušnjar, Urša, Mähler, Anja, Hohmann, Christoph, Chen, Chia-Yu, Cramer, Holger, Dobos, Gustav, Lesker, Till Robin, Strowig, Till, Dechend, Ralf, Bzdok, Danilo, Kleinewietfeld, Markus, Michalsen, Andreas, Müller, Dominik N., Forslund, Sofia K.
Published in Nature communications (30.03.2021)
Published in Nature communications (30.03.2021)
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The effect of probiotic and synbiotic supplementation on lipid parameters among patients with cardiometabolic risk factors: a systematic review and meta-analysis of clinical trials
Ghorbani, Zeinab, Kazemi, Asma, U.P. Bartolomaeus, Theda, Martami, Fahimeh, Noormohammadi, Morvarid, Salari, Arsalan, Löber, Ulrike, Balou, Heydar Ali, K. Forslund, Sofia, Mahdavi-Roshan, Marjan
Published in Cardiovascular research (02.05.2023)
Published in Cardiovascular research (02.05.2023)
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Similarity of the dog and human gut microbiomes in gene content and response to diet
Coelho, Luis Pedro, Kultima, Jens Roat, Costea, Paul Igor, Fournier, Coralie, Pan, Yuanlong, Czarnecki-Maulden, Gail, Hayward, Matthew Robert, Forslund, Sofia K, Schmidt, Thomas Sebastian Benedikt, Descombes, Patrick, Jackson, Janet R, Li, Qinghong, Bork, Peer
Published in Microbiome (19.04.2018)
Published in Microbiome (19.04.2018)
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Journal Article
The gut microbiota in multiple sclerosis varies with disease activity
Thirion, Florence, Sellebjerg, Finn, Fan, Yong, Lyu, Liwei, Hansen, Tue H, Pons, Nicolas, Levenez, Florence, Quinquis, Benoit, Stankevic, Evelina, Søndergaard, Helle B, Dantoft, Thomas M, Poulsen, Casper S, Forslund, Sofia K, Vestergaard, Henrik, Hansen, Torben, Brix, Susanne, Oturai, Annette, Sørensen, Per Soelberg, Ehrlich, Stanislav D, Pedersen, Oluf
Published in Genome medicine (05.01.2023)
Published in Genome medicine (05.01.2023)
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S100A8 and S100A9 Are Important for Postnatal Development of Gut Microbiota and Immune System in Mice and Infants
Willers, Maike, Ulas, Thomas, Völlger, Lena, Vogl, Thomas, Heinemann, Anna S., Pirr, Sabine, Pagel, Julia, Fehlhaber, Beate, Halle, Olga, Schöning, Jennifer, Schreek, Sabine, Löber, Ulrike, Essex, Morgan, Hombach, Peter, Graspeuntner, Simon, Basic, Marijana, Bleich, Andre, Cloppenborg-Schmidt, Katja, Künzel, Sven, Jonigk, Danny, Rupp, Jan, Hansen, Gesine, Förster, Reinhold, Baines, John F., Härtel, Christoph, Schultze, Joachim L., Forslund, Sofia K., Roth, Johannes, Viemann, Dorothee
Published in Gastroenterology (New York, N.Y. 1943) (01.12.2020)
Published in Gastroenterology (New York, N.Y. 1943) (01.12.2020)
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Journal Article
The Gut Microbiome in Myalgic Encephalomyelitis (ME)/Chronic Fatigue Syndrome (CFS)
König, Rahel S, Albrich, Werner C, Kahlert, Christian R, Bahr, Lina Samira, Löber, Ulrike, Vernazza, Pietro, Scheibenbogen, Carmen, Forslund, Sofia K
Published in Frontiers in immunology (03.01.2022)
Published in Frontiers in immunology (03.01.2022)
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Journal Article
Recovery of gut microbiota of healthy adults following antibiotic exposure
Palleja, Albert, Mikkelsen, Kristian H., Forslund, Sofia K., Kashani, Alireza, Allin, Kristine H., Nielsen, Trine, Hansen, Tue H., Liang, Suisha, Feng, Qiang, Zhang, Chenchen, Pyl, Paul Theodor, Coelho, Luis Pedro, Yang, Huanming, Wang, Jian, Typas, Athanasios, Nielsen, Morten F., Nielsen, Henrik Bjorn, Bork, Peer, Wang, Jun, Vilsbøll, Tina, Hansen, Torben, Knop, Filip K., Arumugam, Manimozhiyan, Pedersen, Oluf
Published in Nature microbiology (01.11.2018)
Published in Nature microbiology (01.11.2018)
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Journal Article
Towards the biogeography of prokaryotic genes
Coelho, Luis Pedro, Alves, Renato, del Río, Álvaro Rodríguez, Myers, Pernille Neve, Cantalapiedra, Carlos P., Giner-Lamia, Joaquín, Schmidt, Thomas Sebastian, Mende, Daniel R., Orakov, Askarbek, Letunic, Ivica, Hildebrand, Falk, Van Rossum, Thea, Forslund, Sofia K., Khedkar, Supriya, Maistrenko, Oleksandr M., Pan, Shaojun, Jia, Longhao, Ferretti, Pamela, Sunagawa, Shinichi, Zhao, Xing-Ming, Nielsen, Henrik Bjørn, Huerta-Cepas, Jaime, Bork, Peer
Published in Nature (London) (13.01.2022)
Published in Nature (London) (13.01.2022)
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Journal Article
proGenomes2: an improved database for accurate and consistent habitat, taxonomic and functional annotations of prokaryotic genomes
Mende, Daniel R, Letunic, Ivica, Maistrenko, Oleksandr M, Schmidt, Thomas S B, Milanese, Alessio, Paoli, Lucas, Hernández-Plaza, Ana, Orakov, Askarbek N, Forslund, Sofia K, Sunagawa, Shinichi, Zeller, Georg, Huerta-Cepas, Jaime, Coelho, Luis Pedro, Bork, Peer
Published in Nucleic acids research (08.01.2020)
Published in Nucleic acids research (08.01.2020)
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Journal Article
Inflammation in Children with CKD Linked to Gut Dysbiosis and Metabolite Imbalance
Holle, Johannes, Bartolomaeus, Hendrik, Löber, Ulrike, Behrens, Felix, Bartolomaeus, Theda U P, Anandakumar, Harithaa, Wimmer, Moritz I, Vu, Dai Long, Kuhring, Mathias, Brüning, Ulrike, Maifeld, Andras, Geisberger, Sabrina, Kempa, Stefan, Schumacher, Fabian, Kleuser, Burkhard, Bufler, Philip, Querfeld, Uwe, Kitschke, Stefanie, Engler, Denise, Kuhrt, Leonard D, Drechsel, Oliver, Eckardt, Kai-Uwe, Forslund, Sofia K, Thürmer, Andrea, McParland, Victoria, Kirwan, Jennifer A, Wilck, Nicola, Müller, Dominik
Published in Journal of the American Society of Nephrology (01.12.2022)
Published in Journal of the American Society of Nephrology (01.12.2022)
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