Configurational Preference of the Glutamate Receptor Ligand Binding Domain Dimers
Yonkunas, Michael, Buddhadev, Maiti, Flores Canales, Jose C., Kurnikova, Maria G.
Published in Biophysical journal (06.06.2017)
Published in Biophysical journal (06.06.2017)
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Journal Article
Protein structure modeling and refinement by global optimization in CASP12
Hong, Seung Hwan, Joung, InSuk, Flores‐Canales, Jose C., Manavalan, Balachandran, Cheng, Qianyi, Heo, Seungryong, Kim, Jong Yun, Lee, Sun Young, Nam, Mikyung, Joo, Keehyoung, Lee, In‐Ho, Lee, Sung Jong, Lee, Jooyoung
Published in Proteins, structure, function, and bioinformatics (01.03.2018)
Published in Proteins, structure, function, and bioinformatics (01.03.2018)
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Journal Article
Role of acidic residues in helices TH8-TH9 in membrane interactions of the diphtheria toxin T domain
Ghatak, Chiranjib, Rodnin, Mykola V, Vargas-Uribe, Mauricio, McCluskey, Andrew J, Flores-Canales, Jose C, Kurnikova, Maria, Ladokhin, Alexey S
Published in Toxins (14.04.2015)
Published in Toxins (14.04.2015)
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Journal Article
Baseline Comparisons of Complementary Sampling Methods for Assembly Driven by Short-Ranged Pair Potentials toward Fast and Flexible Hybridization
Ozkan, Aysegul, Sitharam, Meera, Flores-Canales, Jose C, Prabhu, Rahul, Kurnikova, Maria
Published in Journal of chemical theory and computation (09.03.2021)
Published in Journal of chemical theory and computation (09.03.2021)
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Journal Article
Simulating Multiple Substrate-Binding Events by γ‑Glutamyltransferase Using Accelerated Molecular Dynamics
Oliva, Francesco, Flores-Canales, Jose C, Pieraccini, Stefano, Morelli, Carlo F, Sironi, Maurizio, Schiøtt, Birgit
Published in The journal of physical chemistry. B (12.11.2020)
Published in The journal of physical chemistry. B (12.11.2020)
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Journal Article
pH-Triggered Conformational Switching of the Diphtheria Toxin T-Domain: The Roles of N-Terminal Histidines
Kurnikov, Igor V., Kyrychenko, Alexander, Flores-Canales, Jose C., Rodnin, Mykola V., Simakov, Nikolay, Vargas-Uribe, Mauricio, Posokhov, Yevgen O., Kurnikova, Maria, Ladokhin, Alexey S.
Published in Journal of molecular biology (09.08.2013)
Published in Journal of molecular biology (09.08.2013)
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Journal Article
Allosteric Network Analysis in the NMDA Receptor
Berglund, Nils A., Flores-Canales, Jose C., Schiøtt, Birgit
Published in Biophysical journal (07.02.2020)
Published in Biophysical journal (07.02.2020)
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Journal Article
Assessment of network module identification across complex diseases
Choobdar, Sarvenaz, Ahsen, Mehmet E., Crawford, Jake, Tomasoni, Mattia, Fang, Tao, Lamparter, David, Lin, Junyuan, Hescott, Benjamin, Hu, Xiaozhe, Mercer, Johnathan, Natoli, Ted, Narayan, Rajiv, Subramanian, Aravind, Zhang, Jitao D., Stolovitzky, Gustavo, Kutalik, Zoltán, Lage, Kasper, Slonim, Donna K., Saez-Rodriguez, Julio, Cowen, Lenore J., Bergmann, Sven, Marbach, Daniel
Published in Nature methods (01.09.2019)
Published in Nature methods (01.09.2019)
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Journal Article
Multiscale Simulations of Diphtheria Toxin T-Domain Membrane Association
Flores-Canales, Jose C., Ladokhin, Alexey S., Kurnikova, Maria
Published in Biophysical journal (28.01.2014)
Published in Biophysical journal (28.01.2014)
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Journal Article
Membrane Association of Diphtheria Toxin T-Domain Characterized by Coarse-Grained and Atomistic Molecular Dynamics Simulations and Experiments
Flores-Canales, Jose C., Vargas-Uribe, Mauricio, Ladokhin, Alexey S., Kurnikova, Maria
Published in Biophysical journal (29.01.2013)
Published in Biophysical journal (29.01.2013)
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Journal Article
Mechanism of the pH-Triggered Formation of Membrane-Competent State of the Diphtheria Toxin Translocation Domain Revealed by Simulations and Experiment
Flores-Canales, Jose C., Kurnikov, Igor, Simakov, Nikolay, Kyrychenko, Alexander, Rodnin, Mykola V., Ladokhin, Alexey S., Kurnikova, Maria
Published in Biophysical journal (01.02.2011)
Published in Biophysical journal (01.02.2011)
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