GOATOOLS: A Python library for Gene Ontology analyses
Klopfenstein, D. V., Zhang, Liangsheng, Pedersen, Brent S., Ramírez, Fidel, Warwick Vesztrocy, Alex, Naldi, Aurélien, Mungall, Christopher J., Yunes, Jeffrey M., Botvinnik, Olga, Weigel, Mark, Dampier, Will, Dessimoz, Christophe, Flick, Patrick, Tang, Haibao
Published in Scientific reports (18.07.2018)
Published in Scientific reports (18.07.2018)
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Journal Article
An Adaptive Parallel Algorithm for Computing Connected Components
Jain, Chirag, Flick, Patrick, Pan, Tony, Green, Oded, Aluru, Srinivas
Published in IEEE transactions on parallel and distributed systems (01.09.2017)
Published in IEEE transactions on parallel and distributed systems (01.09.2017)
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Journal Article
Kmerind: A Flexible Parallel Library for K-mer Indexing of Biological Sequences on Distributed Memory Systems
Pan, Tony, Flick, Patrick, Jain, Chirag, Liu, Yongchao, Aluru, Srinivas
Published in IEEE/ACM transactions on computational biology and bioinformatics (01.07.2019)
Published in IEEE/ACM transactions on computational biology and bioinformatics (01.07.2019)
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Journal Article
Reprint of “A parallel connectivity algorithm for de Bruijn graphs in metagenomic applications”
Flick, Patrick, Jain, Chirag, Pan, Tony, Aluru, Srinivas
Published in Parallel computing (01.12.2017)
Published in Parallel computing (01.12.2017)
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Journal Article
Parallel Construction of Suffix Trees and the All-Nearest-Smaller-Values Problem
Flick, Patrick, Aluru, Srinivas
Published in 2017 IEEE International Parallel and Distributed Processing Symposium (IPDPS) (01.05.2017)
Published in 2017 IEEE International Parallel and Distributed Processing Symposium (IPDPS) (01.05.2017)
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Conference Proceeding
High Performance Streaming Tensor Decomposition
Soh, Yongseok, Flick, Patrick, Liu, Xing, Smith, Shaden, Checconi, Fabio, Petrini, Fabrizio, Choi, Jee
Published in 2021 IEEE International Parallel and Distributed Processing Symposium (IPDPS) (01.05.2021)
Published in 2021 IEEE International Parallel and Distributed Processing Symposium (IPDPS) (01.05.2021)
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Conference Proceeding
A parallel connectivity algorithm for de Bruijn graphs in metagenomic applications
Flick, Patrick, Jain, Chirag, Pan, Tony, Aluru, Srinivas
Published in Proceedings of the International Conference for High Performance Computing, Networking, Storage and Analysis (15.11.2015)
Published in Proceedings of the International Conference for High Performance Computing, Networking, Storage and Analysis (15.11.2015)
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Conference Proceeding
An Adaptive Parallel Algorithm for Computing Connected Components
Jain, Chirag, Flick, Patrick, Pan, Tony, Green, Oded, Aluru, Srinivas
Year of Publication 20.07.2016
Year of Publication 20.07.2016
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Journal Article
Malleable Sorting
Flick, Patrick, Sanders, Peter, Speck, Jochen
Published in 2013 IEEE 27th International Symposium on Parallel and Distributed Processing (01.05.2013)
Published in 2013 IEEE 27th International Symposium on Parallel and Distributed Processing (01.05.2013)
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Conference Proceeding
An Adaptive Parallel Algorithm for Computing Connected Components
Jain, Chirag, Flick, Patrick, Pan, Tony, Green, Oded, Aluru, Srinivas
Published in arXiv.org (13.02.2017)
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Published in arXiv.org (13.02.2017)
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