Minfi: a flexible and comprehensive Bioconductor package for the analysis of Infinium DNA methylation microarrays
Aryee, Martin J., Jaffe, Andrew E., Corrada-Bravo, Hector, Ladd-Acosta, Christine, Feinberg, Andrew P., Hansen, Kasper D., Irizarry, Rafael A.
Published in Bioinformatics (15.05.2014)
Published in Bioinformatics (15.05.2014)
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Epigenomic reprogramming during pancreatic cancer progression links anabolic glucose metabolism to distant metastasis
McDonald, Oliver G, Li, Xin, Saunders, Tyler, Tryggvadottir, Rakel, Mentch, Samantha J, Warmoes, Marc O, Word, Anna E, Carrer, Alessandro, Salz, Tal H, Natsume, Sonoko, Stauffer, Kimberly M, Makohon-Moore, Alvin, Zhong, Yi, Wu, Hao, Wellen, Kathryn E, Locasale, Jason W, Iacobuzio-Donahue, Christine A, Feinberg, Andrew P
Published in Nature genetics (01.03.2017)
Published in Nature genetics (01.03.2017)
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Epigenetics at the Crossroads of Genes and the Environment
Feinberg, Andrew P, Fallin, M. Daniele
Published in JAMA : the journal of the American Medical Association (15.09.2015)
Published in JAMA : the journal of the American Medical Association (15.09.2015)
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Epigenome-wide association data implicate DNA methylation as an intermediary of genetic risk in rheumatoid arthritis
Liu, Yun, Aryee, Martin J, Padyukov, Leonid, Fallin, M Daniele, Hesselberg, Espen, Runarsson, Arni, Reinius, Lovisa, Acevedo, Nathalie, Taub, Margaret, Ronninger, Marcus, Shchetynsky, Klementy, Scheynius, Annika, Kere, Juha, Alfredsson, Lars, Klareskog, Lars, Ekström, Tomas J, Feinberg, Andrew P
Published in Nature biotechnology (01.02.2013)
Published in Nature biotechnology (01.02.2013)
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DNA methylation of cord blood cell types: Applications for mixed cell birth studies
Bakulski, Kelly M., Feinberg, Jason I., Andrews, Shan V., Yang, Jack, Brown, Shannon, L. McKenney, Stephanie, Witter, Frank, Walston, Jeremy, Feinberg, Andrew P., Fallin, M. Daniele
Published in Epigenetics (03.05.2016)
Published in Epigenetics (03.05.2016)
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Journal Article
Increased methylation variation in epigenetic domains across cancer types
Irizarry, Rafael A, Feinberg, Andrew P, Hansen, Kasper Daniel, Timp, Winston, Bravo, Héctor Corrada, Sabunciyan, Sarven, Langmead, Benjamin, McDonald, Oliver G, Wen, Bo, Wu, Hao, Liu, Yun, Diep, Dinh, Briem, Eirikur, Zhang, Kun
Published in Nature genetics (01.08.2011)
Published in Nature genetics (01.08.2011)
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Differential methylation of tissue- and cancer-specific CpG island shores distinguishes human induced pluripotent stem cells, embryonic stem cells and fibroblasts
Daley, George Q, Feinberg, Andrew P, Doi, Akiko, Park, In-Hyun, Wen, Bo, Murakami, Peter, Aryee, Martin J, Irizarry, Rafael, Herb, Brian, Ladd-Acosta, Christine, Rho, Junsung, Loewer, Sabine, Miller, Justine, Schlaeger, Thorsten
Published in Nature genetics (01.12.2009)
Published in Nature genetics (01.12.2009)
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The human colon cancer methylome shows similar hypo- and hypermethylation at conserved tissue-specific CpG island shores
Irizarry, Rafael A, Feinberg, Andrew P, Ladd-Acosta, Christine, Wen, Bo, Wu, Zhijin, Montano, Carolina, Onyango, Patrick, Cui, Hengmi, Gabo, Kevin, Rongione, Michael, Webster, Maree, Ji, Hong, Potash, James B, Sabunciyan, Sarven
Published in Nature genetics (01.02.2009)
Published in Nature genetics (01.02.2009)
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Journal Article
Large histone H3 lysine 9 dimethylated chromatin blocks distinguish differentiated from embryonic stem cells
Shinkai, Yoichi, Feinberg, Andrew P, Irizarry, Rafael A, Wu, Hao, Wen, Bo
Published in Nature genetics (01.02.2009)
Published in Nature genetics (01.02.2009)
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Journal Article
Donor cell type can influence the epigenome and differentiation potential of human induced pluripotent stem cells
Kim, Kitai, Zhao, Rui, Doi, Akiko, Ng, Kitwa, Unternaehrer, Juli, Cahan, Patrick, Hongguang, Huo, Loh, Yuin-Han, Aryee, Martin J, Lensch, M William, Li, Hu, Collins, James J, Feinberg, Andrew P, Daley, George Q
Published in Nature biotechnology (01.12.2011)
Published in Nature biotechnology (01.12.2011)
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Epigenetic changes in sperm are associated with paternal and child quantitative autistic traits in an autism-enriched cohort
Feinberg, Jason I., Schrott, Rose, Ladd-Acosta, Christine, Newschaffer, Craig J., Hertz-Picciotto, Irva, Croen, Lisa A., Daniele Fallin, M., Feinberg, Andrew P., Volk, Heather E.
Published in Molecular psychiatry (01.01.2024)
Published in Molecular psychiatry (01.01.2024)
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