Cross-cohort gut microbiome associations with immune checkpoint inhibitor response in advanced melanoma
Lee, Karla A., Thomas, Andrew Maltez, Bolte, Laura A., Björk, Johannes R., de Ruijter, Laura Kist, Armanini, Federica, Asnicar, Francesco, Blanco-Miguez, Aitor, Board, Ruth, Calbet-Llopart, Neus, Derosa, Lisa, Dhomen, Nathalie, Brooks, Kelly, Harland, Mark, Harries, Mark, Leeming, Emily R., Lorigan, Paul, Manghi, Paolo, Marais, Richard, Newton-Bishop, Julia, Nezi, Luigi, Pinto, Federica, Potrony, Miriam, Puig, Susana, Serra-Bellver, Patricio, Shaw, Heather M., Tamburini, Sabrina, Valpione, Sara, Vijay, Amrita, Waldron, Levi, Zitvogel, Laurence, Zolfo, Moreno, de Vries, Elisabeth G. E., Nathan, Paul, Fehrmann, Rudolf S. N., Bataille, Véronique, Hospers, Geke A. P., Spector, Tim D., Weersma, Rinse K., Segata, Nicola
Published in Nature medicine (01.03.2022)
Published in Nature medicine (01.03.2022)
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BRCA2 deficiency instigates cGAS-mediated inflammatory signaling and confers sensitivity to tumor necrosis factor-alpha-mediated cytotoxicity
Heijink, Anne Margriet, Talens, Francien, Jae, Lucas T., van Gijn, Stephanie E., Fehrmann, Rudolf S. N., Brummelkamp, Thijn R., van Vugt, Marcel A. T. M.
Published in Nature communications (09.01.2019)
Published in Nature communications (09.01.2019)
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Human disease-associated genetic variation impacts large intergenic non-coding RNA expression
Kumar, Vinod, Westra, Harm-Jan, Karjalainen, Juha, Zhernakova, Daria V, Esko, Tõnu, Hrdlickova, Barbara, Almeida, Rodrigo, Zhernakova, Alexandra, Reinmaa, Eva, Võsa, Urmo, Hofker, Marten H, Fehrmann, Rudolf S N, Fu, Jingyuan, Withoff, Sebo, Metspalu, Andres, Franke, Lude, Wijmenga, Cisca
Published in PLoS genetics (01.01.2013)
Published in PLoS genetics (01.01.2013)
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Transcriptional effects of copy number alterations in a large set of human cancers
Bhattacharya, Arkajyoti, Bense, Rico D., Urzúa-Traslaviña, Carlos G., de Vries, Elisabeth G. E., van Vugt, Marcel A. T. M., Fehrmann, Rudolf S. N.
Published in Nature communications (05.02.2020)
Published in Nature communications (05.02.2020)
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COVID-19 vaccination: the VOICE for patients with cancer
van der Veldt, Astrid A. M., Oosting, Sjoukje F., Dingemans, Anne-Marie C., Fehrmann, Rudolf S. N., GeurtsvanKessel, Corine, Jalving, Mathilde, Rimmelzwaan, Guus F., Kvistborg, Pia, Blank, Christian U., Smit, Egbert F., Lemmens, Valery E. E. P., Hiltermann, T. Jeroen N., Koopmans, Marion P. G., Huckriede, Anke L. W., Rots, Nynke Y., van Els, Cecile A. C. M., van Baarle, Debbie, Haanen, John B. A. G., de Vries, Elisabeth G. E.
Published in Nature medicine (01.04.2021)
Published in Nature medicine (01.04.2021)
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Whole-body CD8+ T cell visualization before and during cancer immunotherapy: a phase 1/2 trial
Kist de Ruijter, Laura, van de Donk, Pim P., Hooiveld-Noeken, Jahlisa S., Giesen, Danique, Elias, Sjoerd G., Lub-de Hooge, Marjolijn N., Oosting, Sjoukje F., Jalving, Mathilde, Timens, Wim, Brouwers, Adrienne H., Kwee, Thomas C., Gietema, Jourik A., Fehrmann, Rudolf S. N., Fine, Bernard M., Sanabria Bohórquez, Sandra M., Yadav, Mahesh, Koeppen, Hartmut, Jing, Jing, Guelman, Sebastian, Lin, Mark T., Mamounas, Michael J., Eastham, Jeffrey Ryan, Kimes, Patrick K., Williams, Simon P., Ungewickell, Alexander, de Groot, Derk J. A., de Vries, Elisabeth G. E.
Published in Nature medicine (01.12.2022)
Published in Nature medicine (01.12.2022)
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Improving gene function predictions using independent transcriptional components
Urzúa-Traslaviña, Carlos G., Leeuwenburgh, Vincent C., Bhattacharya, Arkajyoti, Loipfinger, Stefan, van Vugt, Marcel A. T. M., de Vries, Elisabeth G. E., Fehrmann, Rudolf S. N.
Published in Nature communications (05.03.2021)
Published in Nature communications (05.03.2021)
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Clinical utility of circulating tumor DNA as a response and follow-up marker in cancer therapy
Boonstra, Pieter A., Wind, Thijs T., van Kruchten, Michel, Schuuring, Ed, Hospers, Geke A. P., van der Wekken, Anthonie J., de Groot, Derk-Jan, Schröder, Carolien P., Fehrmann, Rudolf S. N., Reyners, Anna K. L.
Published in Cancer and metastasis reviews (01.09.2020)
Published in Cancer and metastasis reviews (01.09.2020)
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Biological interpretation of genome-wide association studies using predicted gene functions
Pers, Tune H., Karjalainen, Juha M., Chan, Yingleong, Westra, Harm-Jan, Wood, Andrew R., Yang, Jian, Lui, Julian C., Vedantam, Sailaja, Gustafsson, Stefan, Esko, Tonu, Frayling, Tim, Speliotes, Elizabeth K., Boehnke, Michael, Raychaudhuri, Soumya, Fehrmann, Rudolf S. N., Hirschhorn, Joel N., Franke, Lude
Published in Nature communications (19.01.2015)
Published in Nature communications (19.01.2015)
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Growth differentiation factor 15 (GDF-15) plasma levels increase during bleomycin- and cisplatin-based treatment of testicular cancer patients and relate to endothelial damage
Altena, Renske, Fehrmann, Rudolf S N, Boer, Hink, de Vries, Elisabeth G E, Meijer, Coby, Gietema, Jourik A
Published in PloS one (15.01.2015)
Published in PloS one (15.01.2015)
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Evidence based selection of housekeeping genes
de Jonge, Hendrik J M, Fehrmann, Rudolf S N, de Bont, Eveline S J M, Hofstra, Robert M W, Gerbens, Frans, Kamps, Willem A, de Vries, Elisabeth G E, van der Zee, Ate G J, te Meerman, Gerard J, ter Elst, Arja
Published in PloS one (19.09.2007)
Published in PloS one (19.09.2007)
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Identification of relevant drugable targets in diffuse large B-cell lymphoma using a genome-wide unbiased CD20 guilt-by association approach
de Jong, Mathilde R W, Visser, Lydia, Huls, Gerwin, Diepstra, Arjan, van Vugt, Marcel, Ammatuna, Emanuele, van Rijn, Rozemarijn S, Vellenga, Edo, van den Berg, Anke, Fehrmann, Rudolf S N, van Meerten, Tom
Published in PloS one (28.02.2018)
Published in PloS one (28.02.2018)
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Longitudinal gut microbiome changes in immune checkpoint blockade-treated advanced melanoma
Björk, Johannes R., Bolte, Laura A., Maltez Thomas, Andrew, Lee, Karla A., Rossi, Niccolo, Wind, Thijs T., Smit, Lotte M., Armanini, Federica, Asnicar, Francesco, Blanco-Miguez, Aitor, Board, Ruth, Calbet-Llopart, Neus, Derosa, Lisa, Dhomen, Nathalie, Brooks, Kelly, Harland, Mark, Harries, Mark, Lorigan, Paul, Manghi, Paolo, Marais, Richard, Newton-Bishop, Julia, Nezi, Luigi, Pinto, Federica, Potrony, Miriam, Puig, Susana, Serra-Bellver, Patricio, Shaw, Heather M., Tamburini, Sabrina, Valpione, Sara, Waldron, Levi, Zitvogel, Laurence, Zolfo, Moreno, de Vries, Elisabeth G. E., Nathan, Paul, Fehrmann, Rudolf S. N., Spector, Tim D., Bataille, Véronique, Segata, Nicola, Hospers, Geke A. P., Weersma, Rinse K.
Published in Nature medicine (01.03.2024)
Published in Nature medicine (01.03.2024)
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MET-receptor targeted fluorescent imaging and spectroscopy to detect multifocal papillary thyroid cancer
Metman, Madelon J. H., Jonker, Pascal K. C., Sondorp, Luc H. J., van Hemel, Bettien M., Sywak, Mark S., Gill, Anthony J., Jansen, Liesbeth, van Diest, Paul J., van Ginhoven, Tessa M., Löwik, Clemens W. G. M., Nguyen, Anh H., Robinson, Dominic J., van Dam, Gooitzen M., Links, Thera P., Coppes, Rob P., Fehrmann, Rudolf S. N., Kruijff, Schelto
Published in European journal of nuclear medicine and molecular imaging (01.07.2024)
Published in European journal of nuclear medicine and molecular imaging (01.07.2024)
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Liver glycogen phosphorylase is upregulated in glioblastoma and provides a metabolic vulnerability to high dose radiation
Zois, Christos E., Hendriks, Anne M., Haider, Syed, Pires, Elisabete, Bridges, Esther, Kalamida, Dimitra, Voukantsis, Dimitrios, Lagerholm, B. Christoffer, Fehrmann, Rudolf S. N., den Dunnen, Wilfred F. A., Tarasov, Andrei I., Baba, Otto, Morris, John, Buffa, Francesca M., McCullagh, James S. O., Jalving, Mathilde, Harris, Adrian L.
Published in Cell death & disease (28.06.2022)
Published in Cell death & disease (28.06.2022)
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Genome-wide association study of cardiovascular disease in testicular cancer patients treated with platinum-based chemotherapy
Steggink, Lars C., Boer, Hink, Meijer, Coby, Lefrandt, Joop D., Terstappen, Leon W. M. M., Fehrmann, Rudolf S. N., Gietema, Jourik A.
Published in The pharmacogenomics journal (01.04.2021)
Published in The pharmacogenomics journal (01.04.2021)
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Serotonin and Dopamine Receptor Expression in Solid Tumours Including Rare Cancers
Peters, Marloes A. M., Meijer, Coby, Fehrmann, Rudolf S. N., Walenkamp, Annemiek M. E., Kema, Ido P., de Vries, Elisabeth G. E., Hollema, Harry, Oosting, Sjoukje F.
Published in Pathology oncology research (01.07.2020)
Published in Pathology oncology research (01.07.2020)
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Intraoperative MET-receptor targeted fluorescent imaging and spectroscopy for lymph node detection in papillary thyroid cancer: novel diagnostic tools for more selective central lymph node compartment dissection
Jonker, Pascal K. C., Metman, Madelon J. H., Sondorp, Luc H. J., Sywak, Mark S., Gill, Anthony J., Jansen, Liesbeth, Links, Thera P., van Diest, Paul J., van Ginhoven, Tessa M., Löwik, Clemens W. G. M., Nguyen, Anh H., Coppes, Robert P., Robinson, Dominic J., van Dam, Gooitzen M., van Hemel, Bettien M., Fehrmann, Rudolf S. N., Kruijff, Schelto
Published in European journal of nuclear medicine and molecular imaging (01.08.2022)
Published in European journal of nuclear medicine and molecular imaging (01.08.2022)
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Involvement of the TGF-β and β-Catenin Pathways in Pelvic Lymph Node Metastasis in Early-Stage Cervical Cancer
NOORDHUIS, Maartje G, FEHRMANN, Rudolf S. N, HOLLEMA, Harry, DE VRIES, Elisabeth G. E, DE BOCK, Geertruida H, VAN DER ZEE, Ate G. J, SCHUURING, Ed, WISMAN, G. Bea A, NIJHUIS, Esther R, VAN ZANDEN, Jelmer J, MOERLAND, Perry D, VER LOREN VAN THEMAAT, Emiel, VOLDERS, Haukeline H, KOK, Mirjam, TEN HOOF, Klaske A
Published in Clinical cancer research (15.03.2011)
Published in Clinical cancer research (15.03.2011)
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