The high-quality draft genome of peach (Prunus persica) identifies unique patterns of genetic diversity, domestication and genome evolution
Verde, Ignazio, Abbott, Albert G, Scalabrin, Simone, Jung, Sook, Shu, Shengqiang, Marroni, Fabio, Zhebentyayeva, Tatyana, Dettori, Maria Teresa, Grimwood, Jane, Cattonaro, Federica, Zuccolo, Andrea, Rossini, Laura, Jenkins, Jerry, Vendramin, Elisa, Meisel, Lee A, Decroocq, Veronique, Sosinski, Bryon, Prochnik, Simon, Mitros, Therese, Policriti, Alberto, Cipriani, Guido, Dondini, Luca, Ficklin, Stephen, Goodstein, David M, Xuan, Pengfei, Fabbro, Cristian Del, Aramini, Valeria, Copetti, Dario, Gonzalez, Susana, Horner, David S, Falchi, Rachele, Lucas, Susan, Mica, Erica, Maldonado, Jonathan, Lazzari, Barbara, Bielenberg, Douglas, Pirona, Raul, Miculan, Mara, Barakat, Abdelali, Testolin, Raffaele, Stella, Alessandra, Tartarini, Stefano, Tonutti, Pietro, Arús, Pere, Orellana, Ariel, Wells, Christina, Main, Dorrie, Vizzotto, Giannina, Silva, Herman, Salamini, Francesco, Schmutz, Jeremy, Morgante, Michele, Rokhsar, Daniel S
Published in Nature genetics (01.05.2013)
Published in Nature genetics (01.05.2013)
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Sequencing of diverse mandarin, pummelo and orange genomes reveals complex history of admixture during citrus domestication
Wu, G Albert, Prochnik, Simon, Jenkins, Jerry, Salse, Jerome, Hellsten, Uffe, Murat, Florent, Perrier, Xavier, Ruiz, Manuel, Scalabrin, Simone, Terol, Javier, Takita, Marco Aurélio, Labadie, Karine, Poulain, Julie, Couloux, Arnaud, Jabbari, Kamel, Cattonaro, Federica, Del Fabbro, Cristian, Pinosio, Sara, Zuccolo, Andrea, Chapman, Jarrod, Grimwood, Jane, Tadeo, Francisco R, Estornell, Leandro H, Muñoz-Sanz, Juan V, Ibanez, Victoria, Herrero-Ortega, Amparo, Aleza, Pablo, Pérez-Pérez, Julián, Ramón, Daniel, Brunel, Dominique, Luro, François, Chen, Chunxian, Farmerie, William G, Desany, Brian, Kodira, Chinnappa, Mohiuddin, Mohammed, Harkins, Tim, Fredrikson, Karin, Burns, Paul, Lomsadze, Alexandre, Borodovsky, Mark, Reforgiato, Giuseppe, Freitas-Astúa, Juliana, Quetier, Francis, Navarro, Luis, Roose, Mikeal, Wincker, Patrick, Schmutz, Jeremy, Morgante, Michele, Machado, Marcos Antonio, Talon, Manuel, Jaillon, Olivier, Ollitrault, Patrick, Gmitter, Frederick, Rokhsar, Daniel
Published in Nature biotechnology (01.07.2014)
Published in Nature biotechnology (01.07.2014)
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Synergistic parasite-pathogen interactions mediated by host immunity can drive the collapse of honeybee colonies
Nazzi, Francesco, Brown, Sam P, Annoscia, Desiderato, Del Piccolo, Fabio, Di Prisco, Gennaro, Varricchio, Paola, Della Vedova, Giorgio, Cattonaro, Federica, Caprio, Emilio, Pennacchio, Francesco
Published in PLoS pathogens (01.06.2012)
Published in PLoS pathogens (01.06.2012)
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A single polyploidization event at the origin of the tetraploid genome of Coffea arabica is responsible for the extremely low genetic variation in wild and cultivated germplasm
Scalabrin, Simone, Toniutti, Lucile, Di Gaspero, Gabriele, Scaglione, Davide, Magris, Gabriele, Vidotto, Michele, Pinosio, Sara, Cattonaro, Federica, Magni, Federica, Jurman, Irena, Cerutti, Mario, Suggi Liverani, Furio, Navarini, Luciano, Del Terra, Lorenzo, Pellegrino, Gloria, Ruosi, Manuela Rosanna, Vitulo, Nicola, Valle, Giorgio, Pallavicini, Alberto, Graziosi, Giorgio, Klein, Patricia E., Bentley, Nolan, Murray, Seth, Solano, William, Al Hakimi, Amin, Schilling, Timothy, Montagnon, Christophe, Morgante, Michele, Bertrand, Benoit
Published in Scientific reports (13.03.2020)
Published in Scientific reports (13.03.2020)
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Genetic properties of the MAGIC maize population: a new platform for high definition QTL mapping in Zea mays
Dell'Acqua, Matteo, Gatti, Daniel M, Pea, Giorgio, Cattonaro, Federica, Coppens, Frederik, Magris, Gabriele, Hlaing, Aye L, Aung, Htay H, Nelissen, Hilde, Baute, Joke, Frascaroli, Elisabetta, Churchill, Gary A, Inzé, Dirk, Morgante, Michele, Pè, Mario Enrico
Published in Genome Biology (11.09.2015)
Published in Genome Biology (11.09.2015)
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Single primer enrichment technology as a tool for massive genotyping: a benchmark on black poplar and maize
Scaglione, Davide, Pinosio, Sara, Marroni, Fabio, Di Centa, Eleonora, Fornasiero, Alice, Magris, Gabriele, Scalabrin, Simone, Cattonaro, Federica, Taylor, Gail, Morgante, Michele
Published in Annals of botany (29.10.2019)
Published in Annals of botany (29.10.2019)
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Assembly and Annotation of Red Spruce ( Picea rubens ) Chloroplast Genome, Identification of Simple Sequence Repeats, and Phylogenetic Analysis in Picea
Parmar, Rajni, Cattonaro, Federica, Phillips, Carrie, Vassiliev, Serguei, Morgante, Michele, Rajora, Om P
Published in International journal of molecular sciences (03.12.2022)
Published in International journal of molecular sciences (03.12.2022)
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Development and Evaluation of a 9K SNP Array for Peach by Internationally Coordinated SNP Detection and Validation in Breeding Germplasm
Verde, Ignazio, Bassil, Nahla, Scalabrin, Simone, Gilmore, Barbara, Lawley, Cynthia T, Gasic, Ksenija, Micheletti, Diego, Rosyara, Umesh R, Cattonaro, Federica, Vendramin, Elisa, Main, Dorrie, Aramini, Valeria, Blas, Andrea L, Mockler, Todd C, Bryant, Douglas W, Wilhelm, Larry, Troggio, Michela, Sosinski, Bryon, Aranzana, Maria José, Arús, Pere, Iezzoni, Amy, Morgante, Michele, Peace, Cameron, Wu, Rongling
Published in PloS one (20.04.2012)
Published in PloS one (20.04.2012)
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Structural Variations Affecting Genes and Transposable Elements of Chromosome 3B in Wheats
De Oliveira, Romain, Rimbert, Hélène, Balfourier, François, Kitt, Jonathan, Dynomant, Emeric, Vrána, Jan, Doležel, Jaroslav, Cattonaro, Federica, Paux, Etienne, Choulet, Frédéric
Published in Frontiers in genetics (18.08.2020)
Published in Frontiers in genetics (18.08.2020)
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The microbiota of hematophagous ectoparasites collected from migratory birds
Cerutti, Francesco, Modesto, Paola, Rizzo, Francesca, Cravero, Alessandra, Jurman, Irena, Costa, Stefano, Giammarino, Mauro, Mandola, Maria Lucia, Goria, Mariella, Radovic, Slobodanka, Cattonaro, Federica, Acutis, Pier Luigi, Peletto, Simone
Published in PloS one (27.08.2018)
Published in PloS one (27.08.2018)
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The miRNAome of globe artichoke: conserved and novel micro RNAs and target analysis
De Paola, Domenico, Cattonaro, Federica, Pignone, Domenico, Sonnante, Gabriella
Published in BMC genomics (24.01.2012)
Published in BMC genomics (24.01.2012)
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Large‐scale detection of rare variants via pooled multiplexed next‐generation sequencing: towards next‐generation Ecotilling
Marroni, Fabio, Pinosio, Sara, Di Centa, Eleonora, Jurman, Irena, Boerjan, Wout, Felice, Nicoletta, Cattonaro, Federica, Morgante, Michele
Published in The Plant journal : for cell and molecular biology (01.08.2011)
Published in The Plant journal : for cell and molecular biology (01.08.2011)
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A multiscale approach to detect selection in nonmodel tree species: Widespread adaptation despite population decline in Taxus baccata L
Mayol, Maria, Riba, Miquel, Cavers, Stephen, Grivet, Delphine, Vincenot, Lucie, Cattonaro, Federica, Vendramin, Giovanni G., González‐Martínez, Santiago C.
Published in Evolutionary applications (01.01.2020)
Published in Evolutionary applications (01.01.2020)
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Genes and gene clusters related to genotype and drought-induced variation in saccharification potential, lignin content and wood anatomical traits in Populus nigra
Wildhagen, Henning, Paul, Shanty, Allwright, Mike, Smith, Hazel K, Malinowska, Marta, Schnabel, Sabine K, Paulo, M João, Cattonaro, Federica, Vendramin, Vera, Scalabrin, Simone, Janz, Dennis, Douthe, Cyril, Brendel, Oliver, Buré, Cyril, Cohen, David, Hummel, Irène, Le Thiec, Didier, van Eeuwijk, Fred, Keurentjes, Joost J B, Flexas, Jaume, Morgante, Michele, Robson, Paul, Bogeat-Triboulot, Marie-Béatrice, Taylor, Gail, Polle, Andrea
Published in Tree physiology (01.03.2018)
Published in Tree physiology (01.03.2018)
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Evolutionary relevance of lineages in the European black pine (Pinus nigra) in the transcriptomic era
Olsson, Sanna, Grivet, Delphine, Cattonaro, Federica, Vendramin, Vera, Giovannelli, Guia, Scotti-Saintagne, Caroline, Vendramin, Giovanni G., Fady, Bruno
Published in Tree genetics & genomes (01.04.2020)
Published in Tree genetics & genomes (01.04.2020)
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Genomic tools for durum wheat breeding: de novo assembly of Svevo transcriptome and SNP discovery in elite germplasm
Vendramin, Vera, Ormanbekova, Danara, Scalabrin, Simone, Scaglione, Davide, Maccaferri, Marco, Martelli, Pierluigi, Salvi, Silvio, Jurman, Irena, Casadio, Rita, Cattonaro, Federica, Tuberosa, Roberto, Massi, Andrea, Morgante, Michele
Published in BMC genomics (10.04.2019)
Published in BMC genomics (10.04.2019)
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Origin and spread of Bos taurus: new clues from mitochondrial genomes belonging to haplogroup T1
Bonfiglio, Silvia, Ginja, Catarina, De Gaetano, Anna, Achilli, Alessandro, Olivieri, Anna, Colli, Licia, Tesfaye, Kassahun, Agha, Saif Hassan, Gama, Luis T, Cattonaro, Federica, Penedo, M Cecilia T, Ajmone-Marsan, Paolo, Torroni, Antonio, Ferretti, Luca
Published in PloS one (07.06.2012)
Published in PloS one (07.06.2012)
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A 3,000-Loci Transcription Map of Chromosome 3B Unravels the Structural and Functional Features of Gene Islands in Hexaploid Wheat
Rustenholz, Camille, Choulet, Frédéric, Laugier, Christel, Šafář, Jan, Šimková, Hana, Doležel, Jaroslav, Magni, Federica, Scalabrin, Simone, Cattonaro, Federica, Vautrin, Sonia, Bellec, Arnaud, Bergès, Hélène, Feuillet, Catherine, Paux, Etienne
Published in Plant physiology (Bethesda) (01.12.2011)
Published in Plant physiology (Bethesda) (01.12.2011)
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A physical map of the short arm of wheat chromosome 1A
Breen, James, Wicker, Thomas, Shatalina, Margarita, Frenkel, Zeev, Bertin, Isabelle, Philippe, Romain, Spielmeyer, Wolfgang, Simková, Hana, Safář, Jan, Cattonaro, Federica, Scalabrin, Simone, Magni, Federica, Vautrin, Sonia, Bergès, Hélène, Paux, Etienne, Fahima, Tzion, Doležel, Jaroslav, Korol, Abraham, Feuillet, Catherine, Keller, Beat
Published in PloS one (21.11.2013)
Published in PloS one (21.11.2013)
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