Fast and robust active neuron segmentation in two-photon calcium imaging using spatiotemporal deep learning
Soltanian-Zadeh, Somayyeh, Sahingur, Kaan, Blau, Sarah, Gong, Yiyang, Farsiu, Sina
Published in Proceedings of the National Academy of Sciences - PNAS (23.04.2019)
Published in Proceedings of the National Academy of Sciences - PNAS (23.04.2019)
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Automatic segmentation of nine retinal layer boundaries in OCT images of non-exudative AMD patients using deep learning and graph search
Fang, Leyuan, Cunefare, David, Wang, Chong, Guymer, Robyn H, Li, Shutao, Farsiu, Sina
Published in Biomedical optics express (01.05.2017)
Published in Biomedical optics express (01.05.2017)
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Quantitative Classification of Eyes with and without Intermediate Age-related Macular Degeneration Using Optical Coherence Tomography
Farsiu, Sina, PhD, Chiu, Stephanie J., BS, O'Connell, Rachelle V., BS, Folgar, Francisco A., MD, Yuan, Eric, BS, Izatt, Joseph A., PhD, Toth, Cynthia A., MD
Published in Ophthalmology (Rochester, Minn.) (01.01.2014)
Published in Ophthalmology (Rochester, Minn.) (01.01.2014)
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Drusen Volume and Retinal Pigment Epithelium Abnormal Thinning Volume Predict 2-Year Progression of Age-Related Macular Degeneration
Folgar, Francisco A., MD, Yuan, Eric L., BSE, Sevilla, Monica B., MS, Chiu, Stephanie J., PhD, Farsiu, Sina, PhD, Chew, Emily Y., MD, Toth, Cynthia A., MD
Published in Ophthalmology (Rochester, Minn.) (01.01.2016)
Published in Ophthalmology (Rochester, Minn.) (01.01.2016)
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Fully automated detection of diabetic macular edema and dry age-related macular degeneration from optical coherence tomography images
Srinivasan, Pratul P, Kim, Leo A, Mettu, Priyatham S, Cousins, Scott W, Comer, Grant M, Izatt, Joseph A, Farsiu, Sina
Published in Biomedical optics express (01.10.2014)
Published in Biomedical optics express (01.10.2014)
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Journal Article
Super-resolution retinal imaging using optically reassigned scanning laser ophthalmoscopy
DuBose, Theodore B., LaRocca, Francesco, Farsiu, Sina, Izatt, Joseph A.
Published in Nature photonics (01.04.2019)
Published in Nature photonics (01.04.2019)
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Journal Article
Fast Acquisition and Reconstruction of Optical Coherence Tomography Images via Sparse Representation
Leyuan Fang, Shutao Li, McNabb, Ryan P., Qing Nie, Kuo, Anthony N., Toth, Cynthia A., Izatt, Joseph A., Farsiu, Sina
Published in IEEE transactions on medical imaging (01.11.2013)
Published in IEEE transactions on medical imaging (01.11.2013)
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Journal Article
Anti-fibrotic activity of a rho-kinase inhibitor restores outflow function and intraocular pressure homeostasis
Li, Guorong, Lee, Chanyoung, Read, A Thomas, Wang, Ke, Ha, Jungmin, Kuhn, Megan, Navarro, Iris, Cui, Jenny, Young, Katherine, Gorijavolu, Rahul, Sulchek, Todd, Kopczynski, Casey, Farsiu, Sina, Samples, John, Challa, Pratap, Ethier, C Ross, Stamer, W Daniel
Published in eLife (30.03.2021)
Published in eLife (30.03.2021)
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Journal Article
Evaluation of inner retinal layers as biomarkers in mild cognitive impairment to moderate Alzheimer's disease
Lad, Eleonora M, Mukherjee, Dibyendu, Stinnett, Sandra S, Cousins, Scott W, Potter, Guy G, Burke, James R, Farsiu, Sina, Whitson, Heather E
Published in PloS one (08.02.2018)
Published in PloS one (08.02.2018)
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Journal Article
Progression of Intermediate Age-related Macular Degeneration with Proliferation and Inner Retinal Migration of Hyperreflective Foci
Christenbury, Joseph G., BS, Folgar, Francisco A., MD, O'Connell, Rachelle V., BSE, Chiu, Stephanie J., BSE, Farsiu, Sina, PhD, Toth, Cynthia A., MD
Published in Ophthalmology (Rochester, Minn.) (01.05.2013)
Published in Ophthalmology (Rochester, Minn.) (01.05.2013)
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Open source software for automatic detection of cone photoreceptors in adaptive optics ophthalmoscopy using convolutional neural networks
Cunefare, David, Fang, Leyuan, Cooper, Robert F., Dubra, Alfredo, Carroll, Joseph, Farsiu, Sina
Published in Scientific reports (26.07.2017)
Published in Scientific reports (26.07.2017)
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In vivo measurement of trabecular meshwork stiffness in a corticosteroid-induced ocular hypertensive mouse model
Li, Guorong, Lee, Chanyoung, Agrahari, Vibhuti, Wang, Ke, Navarro, Iris, Sherwood, Joseph M., Crews, Karen, Farsiu, Sina, Gonzalez, Pedro, Lin, Cheng-Wen, Mitra, Ashim K., Ethier, C. Ross, Stamer, W. Daniel
Published in Proceedings of the National Academy of Sciences - PNAS (29.01.2019)
Published in Proceedings of the National Academy of Sciences - PNAS (29.01.2019)
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Dynamics of Human Foveal Development after Premature Birth
Maldonado, Ramiro S., MD, O'Connell, Rachelle V., BS, Sarin, Neeru, MD, Freedman, Sharon F., MD, Wallace, David K., MD, MPH, Cotten, C. Michael, MD, Winter, Katrina P., BS, Stinnett, Sandra, DrPH, Chiu, Stephanie J., BS, Izatt, Joseph A., PhD, Farsiu, Sina, PhD, Toth, Cynthia A., MD
Published in Ophthalmology (Rochester, Minn.) (01.12.2011)
Published in Ophthalmology (Rochester, Minn.) (01.12.2011)
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Multimodal Characterization of Proliferative Diabetic Retinopathy Reveals Alterations in Outer Retinal Function and Structure
Boynton, Grace E., BA, Stem, Maxwell S., MD, Kwark, Leon, MSEE, Jackson, Gregory R., PhD, Farsiu, Sina, PhD, Gardner, Thomas W., MD, MS
Published in Ophthalmology (Rochester, Minn.) (01.05.2015)
Published in Ophthalmology (Rochester, Minn.) (01.05.2015)
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Journal Article
Visualization of conventional outflow tissue responses to netarsudil in living mouse eyes
Li, Guorong, Mukherjee, Dibyendu, Navarro, Iris, Ashpole, Nicole E., Sherwood, Joseph M., Chang, Jinlong, Overby, Darryl R., Yuan, Fan, Gonzalez, Pedro, Kopczynski, Casey C., Farsiu, Sina, Stamer, W. Daniel
Published in European journal of pharmacology (15.09.2016)
Published in European journal of pharmacology (15.09.2016)
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Journal Article
Segmentation of neurons from fluorescence calcium recordings beyond real time
Bao, Yijun, Soltanian-Zadeh, Somayyeh, Farsiu, Sina, Gong, Yiyang
Published in Nature machine intelligence (01.07.2021)
Published in Nature machine intelligence (01.07.2021)
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Journal Article
Multimodal Coherent Imaging of Retinal Biomarkers of Alzheimer’s Disease in a Mouse Model
Song, Ge, Steelman, Zachary A., Finkelstein, Stella, Yang, Ziyun, Martin, Ludovic, Chu, Kengyeh K., Farsiu, Sina, Arshavsky, Vadim Y., Wax, Adam
Published in Scientific reports (13.05.2020)
Published in Scientific reports (13.05.2020)
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Journal Article
In Vivo Multimodal Imaging of Drusenoid Lesions in Rhesus Macaques
Yiu, Glenn, Tieu, Eric, Munevar, Christian, Wong, Brittany, Cunefare, David, Farsiu, Sina, Garzel, Laura, Roberts, Jeffrey, Thomasy, Sara M.
Published in Scientific reports (03.11.2017)
Published in Scientific reports (03.11.2017)
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