Metal-isotope-tagged monoclonal antibodies for high-dimensional mass cytometry
Han, Guojun, Spitzer, Matthew H., Bendall, Sean C., Fantl, Wendy J., Nolan, Garry P.
Published in Nature protocols (01.10.2018)
Published in Nature protocols (01.10.2018)
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Journal Article
Single-cell mass cytometry reveals distinct populations of brain myeloid cells in mouse neuroinflammation and neurodegeneration models
Ajami, Bahareh, Samusik, Nikolay, Wieghofer, Peter, Ho, Peggy P., Crotti, Andrea, Bjornson, Zach, Prinz, Marco, Fantl, Wendy J., Nolan, Garry P., Steinman, Lawrence
Published in Nature neuroscience (01.04.2018)
Published in Nature neuroscience (01.04.2018)
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Journal Article
An interactive reference framework for modeling a dynamic immune system
Spitzer, Matthew H., Gherardini, Pier Federico, Fragiadakis, Gabriela K., Bhattacharya, Nupur, Yuan, Robert T., Hotson, Andrew N., Finck, Rachel, Carmi, Yaron, Zunder, Eli R., Fantl, Wendy J., Bendall, Sean C., Engleman, Edgar G., Nolan, Garry P.
Published in Science (American Association for the Advancement of Science) (10.07.2015)
Published in Science (American Association for the Advancement of Science) (10.07.2015)
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Journal Article
CellSeg: a robust, pre-trained nucleus segmentation and pixel quantification software for highly multiplexed fluorescence images
Lee, Michael Y, Bedia, Jacob S, Bhate, Salil S, Barlow, Graham L, Phillips, Darci, Fantl, Wendy J, Nolan, Garry P, Schürch, Christian M
Published in BMC bioinformatics (18.01.2022)
Published in BMC bioinformatics (18.01.2022)
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Journal Article
Single-cell developmental classification of B cell precursor acute lymphoblastic leukemia at diagnosis reveals predictors of relapse
Good, Zinaida, Sarno, Jolanda, Jager, Astraea, Samusik, Nikolay, Aghaeepour, Nima, Simonds, Erin F, White, Leah, Lacayo, Norman J, Fantl, Wendy J, Fazio, Grazia, Gaipa, Giuseppe, Biondi, Andrea, Tibshirani, Robert, Bendall, Sean C, Nolan, Garry P, Davis, Kara L
Published in Nature medicine (01.04.2018)
Published in Nature medicine (01.04.2018)
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Journal Article
High-resolution myogenic lineage mapping by single-cell mass cytometry
Porpiglia, Ermelinda, Samusik, Nikolay, Ho, Andrew Tri Van, Cosgrove, Benjamin D., Mai, Thach, Davis, Kara L., Jager, Astraea, Nolan, Garry P., Bendall, Sean C., Fantl, Wendy J., Blau, Helen M.
Published in Nature cell biology (01.05.2017)
Published in Nature cell biology (01.05.2017)
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Journal Article
Single‐cell mass cytometry adapted to measurements of the cell cycle
Behbehani, Gregory K., Bendall, Sean C., Clutter, Matthew R., Fantl, Wendy J., Nolan, Garry P.
Published in Cytometry. Part A (01.07.2012)
Published in Cytometry. Part A (01.07.2012)
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Journal Article
A platinum‐based covalent viability reagent for single‐cell mass cytometry
Fienberg, Harris G., Simonds, Erin F., Fantl, Wendy J., Nolan, Garry P., Bodenmiller, Bernd
Published in Cytometry. Part A (01.06.2012)
Published in Cytometry. Part A (01.06.2012)
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Journal Article
Commonly Occurring Cell Subsets in High-Grade Serous Ovarian Tumors Identified by Single-Cell Mass Cytometry
Gonzalez, Veronica D., Samusik, Nikolay, Chen, Tiffany J., Savig, Erica S., Aghaeepour, Nima, Quigley, David A., Huang, Ying-Wen, Giangarrà, Valeria, Borowsky, Alexander D., Hubbard, Neil E., Chen, Shih-Yu, Han, Guojun, Ashworth, Alan, Kipps, Thomas J., Berek, Jonathan S., Nolan, Garry P., Fantl, Wendy J.
Published in Cell reports (Cambridge) (13.02.2018)
Published in Cell reports (Cambridge) (13.02.2018)
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Journal Article
Single-cell systems-level analysis of human Toll-like receptor activation defines a chemokine signature in patients with systemic lupus erythematosus
O'Gorman, William E., PhD, Hsieh, Elena W.Y., MD, Savig, Erica S., BA, Gherardini, Pier Federico, PhD, Hernandez, Joseph D., MD, PhD, Hansmann, Leo, PhD, Balboni, Imelda M., MD, PhD, Utz, Paul J., MD, PhD, Bendall, Sean C., PhD, Fantl, Wendy J., PhD, Lewis, David B., MD, Nolan, Garry P., PhD, Davis, Mark M., PhD
Published in Journal of allergy and clinical immunology (01.11.2015)
Published in Journal of allergy and clinical immunology (01.11.2015)
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Journal Article
GateFinder: projection-based gating strategy optimization for flow and mass cytometry
Aghaeepour, Nima, Simonds, Erin F, Knapp, David J H F, Bruggner, Robert V, Sachs, Karen, Culos, Anthony, Gherardini, Pier Federico, Samusik, Nikolay, Fragiadakis, Gabriela K, Bendall, Sean C, Gaudilliere, Brice, Angst, Martin S, Eaves, Connie J, Weiss, William A, Fantl, Wendy J, Nolan, Garry P
Published in Bioinformatics (01.12.2018)
Published in Bioinformatics (01.12.2018)
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Journal Article
Measuring trogocytosis between ovarian tumor and natural killer cells
Delgado-Gonzalez, Antonio, Huang, Ying-Wen, Porpiglia, Ermelinda, Donoso, Kenyi, Gonzalez, Veronica D., Fantl, Wendy J.
Published in STAR protocols (17.06.2022)
Published in STAR protocols (17.06.2022)
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Journal Article
High‐throughput precision measurement of subcellular localization in single cells
Burns, Tyler J., Frei, Andreas P., Gherardini, Pier F., Bava, Felice A., Batchelder, Jake E., Yoshiyasu, Yuki, Yu, Julie M., Groziak, Amanda R., Kimmey, Samuel C., Gonzalez, Veronica D., Fantl, Wendy J., Nolan, Garry P.
Published in Cytometry. Part A (01.02.2017)
Published in Cytometry. Part A (01.02.2017)
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Journal Article
Single-cell mass cytometry for analysis of immune system functional states
Bjornson, Zach B, Nolan, Garry P, Fantl, Wendy J
Published in Current opinion in immunology (01.08.2013)
Published in Current opinion in immunology (01.08.2013)
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Journal Article
Functional characterization of FLT3 receptor signaling deregulation in acute myeloid leukemia by single cell network profiling (SCNP)
Rosen, David B, Minden, Mark D, Kornblau, Steven M, Cohen, Aileen, Gayko, Urte, Putta, Santosh, Woronicz, John, Evensen, Erik, Fantl, Wendy J, Cesano, Alessandra
Published in PloS one (27.10.2010)
Published in PloS one (27.10.2010)
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Journal Article
Association of reactive oxygen species-mediated signal transduction with in vitro apoptosis sensitivity in chronic lymphocytic leukemia B cells
Palazzo, Adam L, Evensen, Erik, Huang, Ying-Wen, Cesano, Alessandra, Nolan, Garry P, Fantl, Wendy J
Published in PloS one (10.10.2011)
Published in PloS one (10.10.2011)
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Journal Article
Distinct patterns of DNA damage response and apoptosis correlate with Jak/Stat and PI3kinase response profiles in human acute myelogenous leukemia
Rosen, David B, Putta, Santosh, Covey, Todd, Huang, Ying-Wen, Nolan, Garry P, Cesano, Alessandra, Minden, Mark D, Fantl, Wendy J
Published in PloS one (25.08.2010)
Published in PloS one (25.08.2010)
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Journal Article
Palladium-based mass tag cell barcoding with a doublet-filtering scheme and single-cell deconvolution algorithm
Zunder, Eli R, Finck, Rachel, Behbehani, Gregory K, Amir, El-ad D, Krishnaswamy, Smita, Gonzalez, Veronica D, Lorang, Cynthia G, Bjornson, Zach, Spitzer, Matthew H, Bodenmiller, Bernd, Fantl, Wendy J, Pe'er, Dana, Nolan, Garry P
Published in Nature protocols (01.02.2015)
Published in Nature protocols (01.02.2015)
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