TOPAS: an innovative proton Monte Carlo platform for research and clinical applications
Perl, J, Shin, J, Schumann, J, Faddegon, B, Paganetti, H
Published in Medical physics (Lancaster) (01.11.2012)
Published in Medical physics (Lancaster) (01.11.2012)
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TOPAS-nBio: An Extension to the TOPAS Simulation Toolkit for Cellular and Sub-cellular Radiobiology
Schuemann, J, McNamara, A L, Ramos-Méndez, J, Perl, J, Held, K D, Paganetti, H, Incerti, S, Faddegon, B
Published in Radiation research (01.02.2019)
Published in Radiation research (01.02.2019)
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Report on G4-Med, a Geant4 benchmarking system for medical physics applications developed by the Geant4 Medical Simulation Benchmarking Group
Arce, P, Bolst, D, Bordage, M-C, Brown, J M C, Cirrone, P, Cortés-Giraldo, M A, Cutajar, D, Cuttone, G, Desorgher, L, Dondero, P, Dotti, A, Faddegon, B, Fedon, C, Guatelli, S, Incerti, S, Ivanchenko, V, Konstantinov, D, Kyriakou, I, Latyshev, G, Le, A, Mancini-Terracciano, C, Maire, M, Mantero, A, Novak, M, Omachi, C, Pandola, L, Perales, A, Perrot, Y, Petringa, G, Quesada, J M, Ramos-Méndez, J, Romano, F, Rosenfeld, A B, Sarmiento, L G, Sakata, D, Sasaki, T, Sechopoulos, I, Simpson, E C, Toshito, T, Wright, D H
Published in Medical physics (Lancaster) (01.01.2021)
Published in Medical physics (Lancaster) (01.01.2021)
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Journal Article
TOPAS simulation of photoneutrons in radiotherapy: accuracy and speed with variance reduction
Ramos-Mendez, J, Ortiz, Catalan R, Schuemann, J, Paganetti, H, Faddegon, B
Published in Physics in medicine & biology (07.06.2024)
Published in Physics in medicine & biology (07.06.2024)
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Journal Article
Monte Carlo simulation of chemistry following radiolysis with TOPAS-nBio
Ramos-Méndez, J, Perl, J, Schuemann, J, McNamara, A, Paganetti, H, Faddegon, B
Published in Physics in medicine & biology (17.05.2018)
Published in Physics in medicine & biology (17.05.2018)
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Journal Article
Experimental validation of the TOPAS Monte Carlo system for passive scattering proton therapy
Testa, M, Schümann, J, Lu, H-M, Shin, J, Faddegon, B, Perl, J, Paganetti, H
Published in Medical physics (Lancaster) (01.12.2013)
Published in Medical physics (Lancaster) (01.12.2013)
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Journal Article
TOPAS-nBio validation for simulating water radiolysis and DNA damage under low-LET irradiation
Ramos-Méndez, J, LaVerne, J A, Domínguez-Kondo, N, Milligan, J, Štěpán, V, Stefanová, K, Perrot, Y, Villagrasa, C, Shin, W-G, Incerti, S, McNamara, A, Paganetti, H, Perl, J, Schuemann, J, Faddegon, B
Published in Physics in medicine & biology (03.09.2021)
Published in Physics in medicine & biology (03.09.2021)
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DNA damage modeled with Geant4-DNA: effects of plasmid DNA conformation and experimental conditions
D-Kondo, N, Moreno-Barbosa, E, Štěphán, V, Stefanová, K, Perrot, Y, Villagrasa, C, Incerti, S, De Celis Alonso, B, Schuemann, J, Faddegon, B, Ramos-Méndez, J
Published in Physics in medicine & biology (15.12.2021)
Published in Physics in medicine & biology (15.12.2021)
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Journal Article
The effect of beam purity and scanner complexity on proton CT accuracy
Piersimoni, P, Ramos-Méndez, J, Geoghegan, T, Bashkirov, V A, Schulte, R W, Faddegon, B A
Published in Medical physics (Lancaster) (01.01.2017)
Published in Medical physics (Lancaster) (01.01.2017)
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Journal Article
A New Standard DNA Damage (SDD) Data Format
Schuemann, J, McNamara, A L, Warmenhoven, J W, Henthorn, N T, Kirkby, K J, Merchant, M J, Ingram, S, Paganetti, H, Held, K D, Ramos-Mendez, J, Faddegon, B, Perl, J, Goodhead, D T, Plante, I, Rabus, H, Nettelbeck, H, Friedland, W, Kundrát, P, Ottolenghi, A, Baiocco, G, Barbieri, S, Dingfelder, M, Incerti, S, Villagrasa, C, Bueno, M, Bernal, M A, Guatelli, S, Sakata, D, Brown, J M C, Francis, Z, Kyriakou, I, Lampe, N, Ballarini, F, Carante, M P, Davídková, M, Štěpán, V, Jia, X, Cucinotta, F A, Schulte, R, Stewart, R D, Carlson, D J, Galer, S, Kuncic, Z, Lacombe, S, Milligan, J, Cho, S H, Sawakuchi, G, Inaniwa, T, Sato, T, Li, W, Solov'yov, A V, Surdutovich, E, Durante, M, Prise, K M, McMahon, S J
Published in Radiation research (01.01.2019)
Published in Radiation research (01.01.2019)
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Journal Article
Monte Carlo track-structure for the radionuclide Copper-64: characterization of S-values, nanodosimetry and quantification of direct damage to DNA
Carrasco-Hernández, J, Ramos-Méndez, J, Faddegon, B, Jalilian, A R, Moranchel, M, Ávila-Rodríguez, M A
Published in Physics in medicine & biology (27.07.2020)
Published in Physics in medicine & biology (27.07.2020)
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Journal Article
Efficient voxel navigation for proton therapy dose calculation in TOPAS and Geant4
Schümann, J, Paganetti, H, Shin, J, Faddegon, B, Perl, J
Published in Physics in medicine & biology (07.06.2012)
Published in Physics in medicine & biology (07.06.2012)
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Journal Article
A modular method to handle multiple time-dependent quantities in Monte Carlo simulations
Shin, J, Perl, J, Schümann, J, Paganetti, H, Faddegon, B A
Published in Physics in medicine & biology (07.06.2012)
Published in Physics in medicine & biology (07.06.2012)
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Journal Article
BEAM: a Monte Carlo code to simulate radiotherapy treatment units
Rogers, D W, Faddegon, B A, Ding, G X, Ma, C M, We, J, Mackie, T R
Published in Medical physics (Lancaster) (01.05.1995)
Published in Medical physics (Lancaster) (01.05.1995)
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Journal Article
Improved efficiency in Monte Carlo simulation for passive-scattering proton therapy
Méndez, J Ramos, Perl, J, Schümann, J, Shin, J, Paganetti, H, Faddegon, B
Published in Physics in medicine & biology (07.07.2015)
Published in Physics in medicine & biology (07.07.2015)
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Journal Article
A framework for implementation of organ effect models in TOPAS with benchmarks extended to proton therapy
Ramos-Méndez, J, Perl, J, Schümann, J, Shin, J, Paganetti, H, Faddegon, B
Published in Physics in medicine & biology (07.07.2015)
Published in Physics in medicine & biology (07.07.2015)
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Journal Article
SU-E-T-473: Performance Assessment of the TOPAS Tool for Particle Simulation for Proton Therapy Applications
Perl, J, Shin, J, Schuemann, J, Faddegon, B, Paganetti, H
Published in Medical physics (Lancaster) (01.06.2012)
Published in Medical physics (Lancaster) (01.06.2012)
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