Microbial transformation from normal oral microbiota to acute endodontic infections
Hsiao, William Wl, Li, Kevin L, Liu, Zhenqiu, Jones, Cheron, Fraser-Liggett, Claire M, Fouad, Ashraf F
Published in BMC genomics (28.07.2012)
Published in BMC genomics (28.07.2012)
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Bacterial diversity in the oral cavity of 10 healthy individuals
Bik, Elisabeth M, Long, Clara Davis, Armitage, Gary C, Loomer, Peter, Emerson, Joanne, Mongodin, Emmanuel F, Nelson, Karen E, Gill, Steven R, Fraser-Liggett, Claire M, Relman, David A
Published in The ISME Journal (01.08.2010)
Published in The ISME Journal (01.08.2010)
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Metagenomic Analysis of the Human Distal Gut Microbiome
Gill, Steven R, Pop, Mihai, DeBoy, Robert T, Eckburg, Paul B, Turnbaugh, Peter J, Samuel, Buck S, Gordon, Jeffrey I, Relman, David A, Fraser-Liggett, Claire M, Nelson, Karen E
Published in Science (American Association for the Advancement of Science) (02.06.2006)
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Genomic diversity of 2010 Haitian cholera outbreak strains
Hasan, Nur A, Choi, Seon Young, Eppinger, Mark, Clark, Philip W, Chen, Arlene, Alam, Munirul, Haley, Bradd J, Taviani, Elisa, Hine, Erin, Su, Qi, Tallon, Luke J, Prosper, Joseph B, Furth, Keziah, Hoq, M. M, Li, Huai, Fraser-Liggett, Claire M, Cravioto, Alejandro, Huq, Anwar, Ravel, Jacques, Cebula, Thomas A, Colwell, Rita R
Published in Proceedings of the National Academy of Sciences - PNAS (17.07.2012)
Published in Proceedings of the National Academy of Sciences - PNAS (17.07.2012)
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Strategies for metagenomic-guided whole-community proteomics of complex microbial environments
Cantarel, Brandi L, Erickson, Alison R, VerBerkmoes, Nathan C, Erickson, Brian K, Carey, Patricia A, Pan, Chongle, Shah, Manesh, Mongodin, Emmanuel F, Jansson, Janet K, Fraser-Liggett, Claire M, Hettich, Robert L
Published in PloS one (23.11.2011)
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Bacillus anthracis comparative genome analysis in support of the Amerithrax investigation
Rasko, David A, Worsham, Patricia L, Abshire, Terry G, Stanley, Scott T, Bannan, Jason D, Wilson, Mark R, Langham, Richard J, Decker, R. Scott, Jiang, Lingxia, Read, Timothy D, Phillippy, Adam M, Salzberg, Steven L, Pop, Mihai, Van Ert, Matthew N, Kenefic, Leo J, Keim, Paul S, Fraser-Liggett, Claire M, Ravel, Jacques
Published in Proceedings of the National Academy of Sciences - PNAS (22.03.2011)
Published in Proceedings of the National Academy of Sciences - PNAS (22.03.2011)
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Global genetic population structure of Bacillus anthracis
Van Ert, Matthew N, Easterday, W Ryan, Huynh, Lynn Y, Okinaka, Richard T, Hugh-Jones, Martin E, Ravel, Jacques, Zanecki, Shaylan R, Pearson, Talima, Simonson, Tatum S, U'Ren, Jana M, Kachur, Sergey M, Leadem-Dougherty, Rebecca R, Rhoton, Shane D, Zinser, Guenevier, Farlow, Jason, Coker, Pamala R, Smith, Kimothy L, Wang, Bingxiang, Kenefic, Leo J, Fraser-Liggett, Claire M, Wagner, David M, Keim, Paul
Published in PloS one (23.05.2007)
Published in PloS one (23.05.2007)
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Pervasive recombination and sympatric genome diversification driven by frequency-dependent selection in Borrelia burgdorferi, the Lyme disease bacterium
Haven, James, Vargas, Levy C, Mongodin, Emmanuel F, Xue, Vincent, Hernandez, Yozen, Pagan, Pedro, Fraser-Liggett, Claire M, Schutzer, Steven E, Luft, Benjamin J, Casjens, Sherwood R, Qiu, Wei-Gang
Published in Genetics (Austin) (01.11.2011)
Published in Genetics (Austin) (01.11.2011)
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Whole-Genome Sequences of Two Borrelia afzelii and Two Borrelia garinii Lyme Disease Agent Isolates
Casjens, Sherwood R, Mongodin, Emmanuel F, Qiu, Wei-Gang, Dunn, John J, Luft, Benjamin J, Fraser-Liggett, Claire M, Schutzer, Steve E
Published in Journal of Bacteriology (01.12.2011)
Published in Journal of Bacteriology (01.12.2011)
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Whole-Genome Sequences of Borrelia bissettii, Borrelia valaisiana, and Borrelia spielmanii
Schutzer, Steven E, Fraser-Liggett, Claire M, Qiu, Wei-Gang, Kraiczy, Peter, Mongodin, Emmanuel F, Dunn, John J, Luft, Benjamin J, Casjens, Sherwood R
Published in Journal of Bacteriology (01.01.2012)
Published in Journal of Bacteriology (01.01.2012)
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The Complete Genome Sequence of Bacillus anthracis Ames “Ancestor”
Ravel, Jacques, Jiang, Lingxia, Stanley, Scott T, Wilson, Mark R, Decker, R Scott, Read, Timothy D, Worsham, Patricia, Keim, Paul S, Salzberg, Steven L, Fraser-Liggett, Claire M, Rasko, David A
Published in Journal of Bacteriology (01.01.2009)
Published in Journal of Bacteriology (01.01.2009)
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The Human Microbiome Project
Turnbaugh, Peter J, Ley, Ruth E, Hamady, Micah, Fraser-Liggett, Claire M, Knight, Rob, Gordon, Jeffrey I
Published in Nature (18.10.2007)
Published in Nature (18.10.2007)
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Sequencing and Analyses of All Known Human Rhinovirus Genomes Reveal Structure and Evolution
Palmenberg, Ann C, Spiro, David, Kuzmickas, Ryan, Wang, Shiliang, Djikeng, Appolinaire, Rathe, Jennifer A, Fraser-Liggett, Claire M, Liggett, Stephen B
Published in Science (American Association for the Advancement of Science) (03.04.2009)
Published in Science (American Association for the Advancement of Science) (03.04.2009)
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Crosstalk between B lymphocytes, microbiota and the intestinal epithelium governs immunity versus metabolism in the gut
Shulzhenko, Natalia, Morgun, Andrey, Hsiao, William, Battle, Michele, Yao, Michael, Gavrilova, Oksana, Orandle, Marlene, Mayer, Lloyd, Macpherson, Andrew J, McCoy, Kathy D, Fraser-Liggett, Claire, Matzinger, Polly
Published in Nature medicine (01.12.2011)
Published in Nature medicine (01.12.2011)
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Draft Genome Sequences of the Diarrheagenic Escherichia coli Collection
Hazen, Tracy H, Sahl, Jason W, Redman, Julia C, Morris, Carolyn R, Daugherty, Sean C, Chibucos, Marcus C, Sengamalay, Naomi A, Fraser-Liggett, Claire M, Steinsland, Hans, Whittam, Thomas S, Whittam, Beth, Manning, Shannon D, Rasko, David A
Published in Journal of Bacteriology (01.06.2012)
Published in Journal of Bacteriology (01.06.2012)
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Draft genome sequence of the oilseed species Ricinus communis
Rabinowicz, Pablo D, Chan, Agnes P, Crabtree, Jonathan, Zhao, Qi, Lorenzi, Hernan, Orvis, Joshua, Puiu, Daniela, Melake-Berhan, Admasu, Jones, Kristine M, Redman, Julia, Chen, Grace, Cahoon, Edgar B, Gedil, Melaku, Stanke, Mario, Haas, Brian J, Wortman, Jennifer R, Fraser-Liggett, Claire M, Ravel, Jacques
Published in Nature biotechnology (01.09.2010)
Published in Nature biotechnology (01.09.2010)
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Characterization of Clinically-Attenuated Burkholderia mallei by Whole Genome Sequencing: Candidate Strain for Exclusion from Select Agent Lists
Schutzer, Steven E, Schlater, Linda R. K, Ronning, Catherine M, DeShazer, David, Luft, Benjamin J, Dunn, John J, Ravel, Jacques, Fraser-Liggett, Claire M, Nierman, William C, Ausubel, Frederick M
Published in PloS one (30.04.2008)
Published in PloS one (30.04.2008)
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