Pathway engineering in yeast for synthesizing the complex polyketide bikaverin
Zhao, Meng, Zhao, Yu, Yao, Mingdong, Iqbal, Hala, Hu, Qi, Liu, Hong, Qiao, Bin, Li, Chun, Skovbjerg, Christine A. S., Nielsen, Jens Christian, Nielsen, Jens, Frandsen, Rasmus J. N., Yuan, Yingjin, Boeke, Jef D.
Published in Nature communications (03.12.2020)
Published in Nature communications (03.12.2020)
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Journal Article
teemi: An open-source literate programming approach for iterative design-build-test-learn cycles in bioengineering
Petersen, Søren D, Levassor, Lucas, Pedersen, Christine M, Madsen, Jan, Hansen, Lea G, Zhang, Jie, Haidar, Ahmad K, Frandsen, Rasmus J N, Keasling, Jay D, Weber, Tilmann, Sonnenschein, Nikolaus, K Jensen, Michael
Published in PLoS computational biology (01.03.2024)
Published in PLoS computational biology (01.03.2024)
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The biosynthetic pathway for aurofusarin in Fusarium graminearum reveals a close link between the naphthoquinones and naphthopyrones
Frandsen, Rasmus J. N., Nielsen, Nikoline J., Maolanon, Nicolai, Sørensen, Jens C., Olsson, Stefan, Nielsen, John, Giese, Henriette
Published in Molecular microbiology (01.08.2006)
Published in Molecular microbiology (01.08.2006)
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One Fungus, One Name: Defining the Genus Fusarium in a Scientifically Robust Way That Preserves Longstanding Use
GEISER, David M, AOKI, Takayuki, CORRELL, James C, COVERT, Sarah F, CROUS, Pedro W, CUOMO, Christina A, SYBREN DE HOOG, G, DI PIETRO, Antonio, ELMER, Wade H, EPSTEIN, Lynn, FRANDSEN, Rasmus J. N, FREEMAN, Stanley, BACON, Charles W, GAGKAEVA, Tatiana, GLENN, Anthony E, GORDON, Thomas R, GREGORY, Nancy F, HAMMOND-KOSACK, Kim E, HANSON, Linda E, DEL MAR JIMENEZ-GASCO, Maria, KANG, Seogchan, CORBY KISTLER, H, KULDAU, Gretchen A, BAKER, Scott E, LESLIE, John F, LOGRIECO, Antonio, GUOZHONG LU, LYSØE, Erik, MA, Li-Jun, MCCORMICK, Susan P, MIGHELI, Quirico, MORETTI, Antonio, MUNAUT, Françoise, O'DONNELL, Kerry, BHATTACHARYYA, Madan K, PFENNING, Ludwig, PLOETZ, Randy C, PROCTOR, Robert H, REHNER, Stephen A, ROBERT, Vincent A. R. G, ROONEY, Alejandro P, BIN SALLEH, Baharuddin, SCANDIANI, Maria Mercedes, SCAUFLAIRE, Jonathan, SHORT, Dylan P. G, BRANDT, Mary E, STEENKAMP, Emma, SUGA, Haruhisa, SUMMERELL, Brett A, SUTTON, Deanna A, THRANE, Ulf, TRAIL, Francis, VAN DIEPENINGEN, Anne, VANETTEN, Hans D, VILJOEN, Altus, WAALWIJK, Cees, BROWN, Daren W, BURGESS, Lester W, CHULZE, Sofia, COLEMAN, Jeffrey J
Published in Phytopathology (01.05.2013)
Published in Phytopathology (01.05.2013)
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Phylogenetic analyses of RPB1 and RPB2 support a middle Cretaceous origin for a clade comprising all agriculturally and medically important fusaria
O’Donnell, Kerry, Rooney, Alejandro P., Proctor, Robert H., Brown, Daren W., McCormick, Susan P., Ward, Todd J., Frandsen, Rasmus J.N., Lysøe, Erik, Rehner, Stephen A., Aoki, Takayuki, Robert, Vincent A.R.G., Crous, Pedro W., Groenewald, Johannes Z., Kang, Seogchan, Geiser, David M.
Published in Fungal genetics and biology (01.03.2013)
Published in Fungal genetics and biology (01.03.2013)
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The genome of the generalist plant pathogen Fusarium avenaceum is enriched with genes involved in redox, signaling and secondary metabolism
Lysøe, Erik, Harris, Linda J, Walkowiak, Sean, Subramaniam, Rajagopal, Divon, Hege H, Riiser, Even S, Llorens, Carlos, Gabaldón, Toni, Kistler, H Corby, Jonkers, Wilfried, Kolseth, Anna-Karin, Nielsen, Kristian F, Thrane, Ulf, Frandsen, Rasmus J N
Published in PloS one (19.11.2014)
Published in PloS one (19.11.2014)
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Methylenetetrahydrofolate Reductase Activity Is Involved in the Plasma Membrane Redox System Required for Pigment Biosynthesis in Filamentous Fungi
Frandsen, Rasmus J N, Albertsen, Klaus Selk, Stougaard, Peter, Sørensen, Jens L, Nielsen, Kristian F, Olsson, Stefan, Giese, Henriette
Published in Eukaryotic Cell (01.08.2010)
Published in Eukaryotic Cell (01.08.2010)
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Characterization of a membrane-bound C-glucosyltransferase responsible for carminic acid biosynthesis in Dactylopius coccus Costa
Kannangara, Rubini, Siukstaite, Lina, Borch-Jensen, Jonas, Madsen, Bjørn, Kongstad, Kenneth T., Staerk, Dan, Bennedsen, Mads, Okkels, Finn T., Rasmussen, Silas A., Larsen, Thomas O., Frandsen, Rasmus J. N., Møller, Birger Lindberg
Published in Nature communications (07.12.2017)
Published in Nature communications (07.12.2017)
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Development of pollution-induced community tolerance is linked to structural and functional resilience of a soil bacterial community following a five-year field exposure to copper
Brandt, Kristian K., Frandsen, Rasmus J.N., Holm, Peter E., Nybroe, Ole
Published in Soil biology & biochemistry (01.05.2010)
Published in Soil biology & biochemistry (01.05.2010)
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Draft genome sequence and chemical profiling of Fusarium langsethiae, an emerging producer of type A trichothecenes
Lysøe, Erik, Frandsen, Rasmus J.N., Divon, Hege H., Terzi, Valeria, Orrù, Luigi, Lamontanara, Antonella, Kolseth, Anna-Karin, Nielsen, Kristian F., Thrane, Ulf
Published in International journal of food microbiology (16.03.2016)
Published in International journal of food microbiology (16.03.2016)
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Combining UHPLC-High Resolution MS and Feeding of Stable Isotope Labeled Polyketide Intermediates for Linking Precursors to End Products
Klitgaard, Andreas, Frandsen, Rasmus J. N, Holm, Dorte K, Knudsen, Peter B, Frisvad, Jens C, Nielsen, Kristian F
Published in Journal of natural products (Washington, D.C.) (24.07.2015)
Published in Journal of natural products (Washington, D.C.) (24.07.2015)
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Applying Parallel Factor Analysis models to HPLC diode array detector datasets reveals strain dependent regulation of polyketide biosynthesis in Fusarium graminearum, Fusarium culmorum and Fusarium pseudograminearum
Andersson, Jens A., Andersson, Claus A., Frandsen, Rasmus J.N.
Published in Analytica chimica acta (11.08.2009)
Published in Analytica chimica acta (11.08.2009)
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pre-processing strategy for liquid chromatography time-of-flight mass spectrometry metabolic fingerprinting data
Nielsen, Nikoline J, Tomasi, Giorgio, Frandsen, Rasmus J. N, Kristensen, Matilde B, Nielsen, John, Giese, Henriette, Christensen, Jan H
Published in Metabolomics (01.09.2010)
Published in Metabolomics (01.09.2010)
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Unveiling the fungal diversity and associated secondary metabolism on black apples
Cowled, Michael S, Phippen, Christopher B W, Kromphardt, Kresten J K, Clemmensen, Sidsel E, Frandsen, Rasmus J N, Frisvad, Jens C, Larsen, Thomas O
Published in Applied and environmental microbiology (24.07.2024)
Published in Applied and environmental microbiology (24.07.2024)
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Journal Article
Genetics of Polyketide Metabolism in Aspergillus nidulans
Klejnstrup, Marie L, Frandsen, Rasmus J N, Holm, Dorte K, Nielsen, Morten T, Mortensen, Uffe H, Larsen, Thomas O, Nielsen, Jakob B
Published in Metabolites (30.01.2012)
Published in Metabolites (30.01.2012)
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Book Review