Parasites as conservation tools
Gagne, Roderick B., Crooks, Kevin R., Craft, Meggan E., Chiu, Elliott S., Fountain‐Jones, Nicholas M., Malmberg, Jennifer L., Carver, Scott, Funk, W. Chris, VandeWoude, Sue
Published in Conservation biology (01.02.2022)
Published in Conservation biology (01.02.2022)
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Journal Article
How to make more from exposure data? An integrated machine learning pipeline to predict pathogen exposure
Fountain‐Jones, Nicholas M., Machado, Gustavo, Carver, Scott, Packer, Craig, Recamonde‐Mendoza, Mariana, Craft, Meggan E., Fenton, Andy
Published in The Journal of animal ecology (01.10.2019)
Published in The Journal of animal ecology (01.10.2019)
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Journal Article
Towards an eco‐phylogenetic framework for infectious disease ecology
Fountain‐Jones, Nicholas M., Pearse, William D., Escobar, Luis E., Alba‐Casals, Ana, Carver, Scott, Davies, T. Jonathan, Kraberger, Simona, Papeş, Monica, Vandegrift, Kurt, Worsley‐Tonks, Katherine, Craft, Meggan E.
Published in Biological reviews of the Cambridge Philosophical Society (01.05.2018)
Published in Biological reviews of the Cambridge Philosophical Society (01.05.2018)
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Journal Article
Machine learning in molecular ecology
Fountain‐Jones, Nicholas M., Smith, Megan L., Austerlitz, Frédéric
Published in Molecular ecology resources (01.11.2021)
Published in Molecular ecology resources (01.11.2021)
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Journal Article
Functional traits explain waterbirds' host status, subtype richness, and community‐level infection risk for avian influenza
Yin, Shenglai, Li, Ning, Xu, Wenjie, Becker, Daniel J., de Boer, Willem F., Xu, Chi, Mundkur, Taej, Fountain‐Jones, Nicholas M., Li, Chunlin, Han, Guan‐zhu, Wu, Qiang, Prosser, Diann J., Cui, Lijuan, Huang, Zheng Y. X.
Published in Ecology letters (01.10.2023)
Published in Ecology letters (01.10.2023)
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Journal Article
Improving the predictability and interpretability of co‐occurrence modelling through feature‐based joint species distribution ensembles
Powell‐Romero, Francisca, Fountain‐Jones, Nicholas M., Norberg, Anna, Clark, Nicholas J.
Published in Methods in ecology and evolution (01.01.2023)
Published in Methods in ecology and evolution (01.01.2023)
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Journal Article
Microbial associations and spatial proximity predict North American moose (Alces alces) gastrointestinal community composition
Fountain‐Jones, Nicholas M., Clark, Nicholas J., Kinsley, Amy C., Carstensen, Michelle, Forester, James, Johnson, Timothy J., Miller, Elizabeth A., Moore, Seth, Wolf, Tiffany M., Craft, Meggan E., Hoye, Bethany
Published in The Journal of animal ecology (01.03.2020)
Published in The Journal of animal ecology (01.03.2020)
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Journal Article
Group density, disease, and season shape territory size and overlap of social carnivores
Brandell, Ellen E., Fountain‐Jones, Nicholas M., Gilbertson, Marie L. J., Cross, Paul C., Hudson, Peter J., Smith, Douglas W., Stahler, Daniel R., Packer, Craig, Craft, Meggan E., Farine, Damien
Published in The Journal of animal ecology (01.01.2021)
Published in The Journal of animal ecology (01.01.2021)
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Journal Article
MrIML: Multi‐response interpretable machine learning to model genomic landscapes
Fountain‐Jones, Nicholas M., Kozakiewicz, Christopher P., Forester, Brenna R., Landguth, Erin L., Carver, Scott, Charleston, Michael, Gagne, Roderick B., Greenwell, Brandon, Kraberger, Simona, Trumbo, Daryl R., Mayer, Michael, Clark, Nicholas J., Machado, Gustavo
Published in Molecular ecology resources (01.11.2021)
Published in Molecular ecology resources (01.11.2021)
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Journal Article
Urbanization impacts apex predator gene flow but not genetic diversity across an urban‐rural divide
Trumbo, Daryl R., Salerno, Patricia E., Logan, Kenneth A., Alldredge, Mathew W., Gagne, Roderick B., Kozakiewicz, Christopher P., Kraberger, Simona, Fountain‐Jones, Nicholas M., Craft, Meggan E., Carver, Scott, Ernest, Holly B., Crooks, Kevin R., VandeWoude, Sue, Funk, W. Chris
Published in Molecular ecology (01.11.2019)
Published in Molecular ecology (01.11.2019)
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Journal Article
Species‐specific spatiotemporal patterns of leopard, lion and tiger attacks on humans
Packer, Craig, Shivakumar, Shweta, Athreya, Vidya, Craft, Meggan E., Dhanwatey, Harshawardhan, Dhanwatey, Poonam, Gurung, Bhim, Joshi, Anup, Kushnir, Hadas, Linnell, John D. C., Fountain‐Jones, Nicholas M., Toit, Johan
Published in The Journal of applied ecology (01.03.2019)
Published in The Journal of applied ecology (01.03.2019)
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Journal Article
Sharing and reporting benefits from biodiversity research
Marden, Emily, Abbott, Richard J., Austerlitz, Frédéric, Ortiz‐Barrientos, Daniel, Baucom, Regina S., Bongaerts, Pim, Bonin, Aurélie, Bonneaud, Camille, Browne, Luke, Alex Buerkle, C., Caicedo, Ana L., Coltman, David W., Cruzan, Mitchell B., Davison, Angus, DeWoody, J. Andrew, Dumbrell, Alex J., Emerson, Brent C., Fountain‐Jones, Nicholas M., Gillespie, Rosemary, Giraud, Tatiana, Hansen, Michael M., Hodgins, Kathryn A., Heuertz, Myriam, Hirase, Shotaro, Hooper, Rebecca, Hohenlohe, Paul, Kane, Nolan C., Kelley, Joanna L., Kinziger, Andrew P., McKenzie, Valerie J., Moreau, Corrie S., Nazareno, Alison G., Pelletier, Tara A., Pemberton, Josephine M., Qu, Yanhua, Renaut, Sébastien, Riginos, Cynthia, Rodríguez‐Ezpeleta, Naiara, Rogers, Sean M., Russell, Jacob A., Schoville, Sean D., Shi, Suhua, Smith, Megan, Sork, Victoria L., Stone, Graham N., Taberlet, Pierre, Videvall, Elin, Waits, Lisette, Warschefsky, Emily, Wayne, Robert K., Whibley, Annabel, Willoughby, Janna, Yoder, Jeremy B., Zinger, Lucie, Sibbett, Benjamin, Narum, Shawn, Rieseberg, Loren H.
Published in Molecular ecology (01.03.2021)
Published in Molecular ecology (01.03.2021)
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Journal Article
Endemic infection can shape exposure to novel pathogens: Pathogen co‐occurrence networks in the Serengeti lions
Fountain‐Jones, Nicholas M., Packer, Craig, Jacquot, Maude, Blanchet, F. Guillaume, Terio, Karen, Craft, Meggan E., Ezenwa, Vanessa
Published in Ecology letters (01.06.2019)
Published in Ecology letters (01.06.2019)
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Journal Article
Pathogens in space: Advancing understanding of pathogen dynamics and disease ecology through landscape genetics
Kozakiewicz, Christopher P., Burridge, Christopher P., Funk, W. Chris, VandeWoude, Sue, Craft, Meggan E., Crooks, Kevin R., Ernest, Holly B., Fountain‐Jones, Nicholas M., Carver, Scott
Published in Evolutionary applications (01.12.2018)
Published in Evolutionary applications (01.12.2018)
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Journal Article
The tumour is in the detail: Local phylogenetic, population and epidemiological dynamics of a transmissible cancer in Tasmanian devils
Hamede, Rodrigo, Fountain‐Jones, Nicholas M., Arce, Fernando, Jones, Menna, Storfer, Andrew, Hohenlohe, Paul A., McCallum, Hamish, Roche, Benjamin, Ujvari, Beata, Thomas, Frédéric
Published in Evolutionary applications (01.07.2023)
Published in Evolutionary applications (01.07.2023)
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Journal Article
Wildlife nidoviruses: biology, epidemiology, and disease associations of selected nidoviruses of mammals and reptiles
Flies, Andrew S, Flies, Emily J, Fountain-Jones, Nicholas M, Musgrove, Ruth E, Hamede, Rodrigo K, Philips, Annie, Perrott, Matthew R F, Dunowska, Magdalena
Published in mBio (13.07.2023)
Published in mBio (13.07.2023)
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Journal Article