Immune Toxicities Elicted by CTLA-4 Blockade in Cancer Patients Are Associated with Early Diversification of the T-cell Repertoire
Oh, David Y, Cham, Jason, Zhang, Li, Fong, Grant, Kwek, Serena S, Klinger, Mark, Faham, Malek, Fong, Lawrence
Published in Cancer research (Chicago, Ill.) (15.03.2017)
Published in Cancer research (Chicago, Ill.) (15.03.2017)
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Minimal residual disease negativity using deep sequencing is a major prognostic factor in multiple myeloma
Perrot, Aurore, Lauwers-Cances, Valerie, Corre, Jill, Robillard, Nelly, Hulin, Cyrille, Chretien, Marie-Lorraine, Dejoie, Thomas, Maheo, Sabrina, Stoppa, Anne-Marie, Pegourie, Brigitte, Karlin, Lionel, Garderet, Laurent, Arnulf, Bertrand, Doyen, Chantal, Meuleman, Nathalie, Royer, Bruno, Eveillard, Jean-Richard, Benboubker, Lotfi, Dib, Mamoun, Decaux, Olivier, Jaccard, Arnaud, Belhadj, Karim, Brechignac, Sabine, Kolb, Brigitte, Fohrer, Cecile, Mohty, Mohamad, Macro, Margaret, Richardson, Paul G., Carlton, Victoria, Moorhead, Martin, Willis, Tom, Faham, Malek, Anderson, Kenneth C., Harousseau, Jean-Luc, Leleu, Xavier, Facon, Thierry, Moreau, Philippe, Attal, Michel, Avet-Loiseau, Hervé, Munshi, Nikhil
Published in Blood (06.12.2018)
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Deep-sequencing approach for minimal residual disease detection in acute lymphoblastic leukemia
Faham, Malek, Zheng, Jianbiao, Moorhead, Martin, Carlton, Victoria E.H., Stow, Patricia, Coustan-Smith, Elaine, Pui, Ching-Hon, Campana, Dario
Published in Blood (20.12.2012)
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Circulating tumour DNA and CT monitoring in patients with untreated diffuse large B-cell lymphoma: a correlative biomarker study
Roschewski, Mark, MD, Dunleavy, Kieron, MD, Pittaluga, Stefania, MD-PhD, Moorhead, Martin, PhD, Pepin, Francois, PhD, Kong, Katherine, MS, Shovlin, Margaret, RN, Jaffe, Elaine S, MD, Staudt, Louis M, MD-PhD, Lai, Catherine, MD, Steinberg, Seth M, PhD, Chen, Clara C, MD, Zheng, Jianbiao, PhD, Willis, Thomas D, PhD, Faham, Malek, MD-PhD, Wilson, Wyndham H, Dr
Published in The lancet oncology (01.05.2015)
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Multiplex Identification of Antigen-Specific T Cell Receptors Using a Combination of Immune Assays and Immune Receptor Sequencing
Klinger, Mark, Pepin, Francois, Wilkins, Jen, Asbury, Thomas, Wittkop, Tobias, Zheng, Jianbiao, Moorhead, Martin, Faham, Malek
Published in PloS one (28.10.2015)
Published in PloS one (28.10.2015)
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Noninvasive monitoring of diffuse large B-cell lymphoma by immunoglobulin high-throughput sequencing
Kurtz, David M., Green, Michael R., Bratman, Scott V., Scherer, Florian, Liu, Chih Long, Kunder, Christian A., Takahashi, Kazuhiro, Glover, Cynthia, Keane, Colm, Kihira, Shingo, Visser, Brendan, Callahan, Jason, Kong, Katherine A., Faham, Malek, Corbelli, Karen S., Miklos, David, Advani, Ranjana H., Levy, Ronald, Hicks, Rodney J., Hertzberg, Mark, Ohgami, Robert S., Gandhi, Maher K., Diehn, Maximilian, Alizadeh, Ash A.
Published in Blood (11.06.2015)
Published in Blood (11.06.2015)
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Prognostic value of deep sequencing method for minimal residual disease detection in multiple myeloma
Martinez-Lopez, Joaquin, Lahuerta, Juan J., Pepin, François, González, Marcos, Barrio, Santiago, Ayala, Rosa, Puig, Noemí, Montalban, María A., Paiva, Bruno, Weng, Li, Jiménez, Cristina, Sopena, María, Moorhead, Martin, Cedena, Teresa, Rapado, Immaculada, Mateos, María Victoria, Rosiñol, Laura, Oriol, Albert, Blanchard, María J., Martínez, Rafael, Bladé, Joan, San Miguel, Jesús, Faham, Malek, García-Sanz, Ramón
Published in Blood (15.05.2014)
Published in Blood (15.05.2014)
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Discovery of T Cell Receptor β Motifs Specific to HLA–B27–Positive Ankylosing Spondylitis by Deep Repertoire Sequence Analysis
Faham, Malek, Carlton, Victoria, Moorhead, Martin, Zheng, Jianbiao, Klinger, Mark, Pepin, Francois, Asbury, Thomas, Vignali, Marissa, Emerson, Ryan O., Robins, Harlan S., Ireland, James, Baechler‐Gillespie, Emily, Inman, Robert D.
Published in Arthritis & rheumatology (Hoboken, N.J.) (01.04.2017)
Published in Arthritis & rheumatology (Hoboken, N.J.) (01.04.2017)
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Diverse somatic mutation patterns and pathway alterations in human cancers
Li, Li, Waring, Paul, Stern, Howard M, Stokoe, David, Zheng, Jianbiao, Eberhard, David A, Chaudhuri, Subhra, Moorhead, Martin, Wang, Weiru, Yue, Peng, Modrusan, Zora, Pujara, Kanan, Faham, Malek, Davis, David P, Eigenbrot, Charles, Tomsho, Lynn P, Janakiraman, Vasantharajan, Stinson, Jeremy, Bourgon, Richard, Carlton, Victoria E. H, Jaiswal, Bijay S, Seshagiri, Somasekar, Kaminker, Joshua S, Schuster, Stephan C, Kan, Zhengyan, Peters, Brock A, Cordes, Shaun, Zhang, Zemin, de Sauvage, Frederic J, Bhatt, Deepali, Haverty, Peter M, Yuan, Wenlin
Published in Nature (London) (12.08.2010)
Published in Nature (London) (12.08.2010)
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Ultra-short cell-free DNA fragments enhance cancer early detection in a multi-analyte blood test combining mutation, protein and fragmentomics
Wang, Fenfen, Li, Xinxing, Li, Mengxing, Liu, Wendi, Lu, Lingjia, Li, Yang, Chen, Xiaojing, Yang, Siqi, Liu, Tao, Cheng, Wen, Weng, Li, Wang, Hongyan, Lu, Dongsheng, Yao, Qianqian, Wang, Yingyu, Wu, Johnny, Wittkop, Tobias, Faham, Malek, Zhou, Huabang, Hu, Heping, Jin, Hai, Hu, Zhiqian, Ma, Ding, Cheng, Xiaodong
Published in Clinical chemistry and laboratory medicine (26.01.2024)
Published in Clinical chemistry and laboratory medicine (26.01.2024)
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Ultra-sensitive molecular residual disease detection through whole genome sequencing with single-read error correction
Li, Xinxing, Liu, Tao, Bacchiocchi, Antonella, Li, Mengxing, Cheng, Wen, Wittkop, Tobias, Mendez, Fernando L, Wang, Yingyu, Tang, Paul, Yao, Qianqian, Bosenberg, Marcus W, Sznol, Mario, Yan, Qin, Faham, Malek, Weng, Li, Halaban, Ruth, Jin, Hai, Hu, Zhiqian
Published in EMBO molecular medicine (12.09.2024)
Published in EMBO molecular medicine (12.09.2024)
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Detection of classical Hodgkin lymphoma specific sequence in peripheral blood using a next‐generation sequencing approach
Oki, Yasuhiro, Neelapu, Sattva S., Fanale, Michelle, Kwak, Larry W., Fayad, Luis, Rodriguez, Maria A., Wallace, Michael, Klinger, Mark, Carlton, Victoria, Kong, Katherine, Faham, Malek, Younes, Anas
Published in British journal of haematology (01.06.2015)
Published in British journal of haematology (01.06.2015)
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A comparison of minimal residual disease detection in autografts among ASO‐qPCR, droplet digital PCR, and next‐generation sequencing in patients with multiple myeloma who underwent autologous stem cell transplantation
Takamatsu, Hiroyuki, Wee, Rachel K., Zaimoku, Yoshitaka, Murata, Ryoichi, Zheng, Jianbiao, Moorhead, Martin, Carlton, Victoria E. H., Kong, Katherine A., Takezako, Naoki, Ito, Shigeki, Miyamoto, Toshihiro, Yokoyama, Kenji, Matsue, Kosei, Sato, Tsutomu, Kurokawa, Toshiro, Yagi, Hideo, Terasaki, Yasushi, Ohata, Kinya, Matsumoto, Morio, Yoshida, Takashi, Faham, Malek, Nakao, Shinji
Published in British journal of haematology (01.11.2018)
Published in British journal of haematology (01.11.2018)
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Population structure, differential bias and genomic control in a large-scale, case-control association study
Clayton, David G, Todd, John A, Walker, Neil M, Smyth, Deborah J, Pask, Rebecca, Cooper, Jason D, Maier, Lisa M, Smink, Luc J, Lam, Alex C, Ovington, Nigel R, Stevens, Helen E, Nutland, Sarah, Howson, Joanna M M, Faham, Malek, Moorhead, Martin, Jones, Hywel B, Falkowski, Matthew, Hardenbol, Paul, Willis, Thomas D
Published in Nature genetics (01.11.2005)
Published in Nature genetics (01.11.2005)
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Ovarian carcinomas with genetic and epigenetic BRCA1 loss have distinct molecular abnormalities
Press, Joshua Z, De Luca, Alessandro, Boyd, Niki, Young, Sean, Troussard, Armelle, Ridge, Yolanda, Kaurah, Pardeep, Kalloger, Steve E, Blood, Katherine A, Smith, Margaret, Spellman, Paul T, Wang, Yuker, Miller, Dianne M, Horsman, Doug, Faham, Malek, Gilks, C Blake, Gray, Joe, Huntsman, David G
Published in BMC cancer (22.01.2008)
Published in BMC cancer (22.01.2008)
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Antigen receptor sequencing of paired bone marrow samples shows homogeneous distribution of acute lymphoblastic leukemia subclones
Theunissen, Prisca M J, van Zessen, David, Stubbs, Andrew P, Faham, Malek, Zwaan, Christian M, van Dongen, Jacques J M, Van Der Velden, Vincent H J
Published in Haematologica (Roma) (01.11.2017)
Published in Haematologica (Roma) (01.11.2017)
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Prediction of epigenetically regulated genes in breast cancer cell lines
Loss, Leandro A, Sadanandam, Anguraj, Durinck, Steffen, Nautiyal, Shivani, Flaucher, Diane, Carlton, Victoria E H, Moorhead, Martin, Lu, Yontao, Gray, Joe W, Faham, Malek, Spellman, Paul, Parvin, Bahram
Published in BMC bioinformatics (04.06.2010)
Published in BMC bioinformatics (04.06.2010)
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High-throughput method for analyzing methylation of CpGs in targeted genomic regions
Nautiyal, Shivani, Carlton, Victoria E. H., Lu, Yontao, Ireland, James S., Flaucher, Diane, Moorhead, Martin, Gray, Joe W., Spellman, Paul, Mindrinos, Michael, Berg, Paul, Faham, Malek, Ecker, Joseph R.
Published in Proceedings of the National Academy of Sciences - PNAS (13.07.2010)
Published in Proceedings of the National Academy of Sciences - PNAS (13.07.2010)
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