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Singh, Rajbir, Chandrashekharappa, Sandeep, Bodduluri, Sobha R., Baby, Becca V., Hegde, Bindu, Kotla, Niranjan G., Hiwale, Ankita A., Saiyed, Taslimarif, Patel, Paresh, Vijay-Kumar, Matam, Langille, Morgan G. I., Douglas, Gavin M., Cheng, Xi, Rouchka, Eric C., Waigel, Sabine J., Dryden, Gerald W., Alatassi, Houda, Zhang, Huang-Ge, Haribabu, Bodduluri, Vemula, Praveen K., Jala, Venkatakrishna R.
Published in Nature communications (09.01.2019)
Published in Nature communications (09.01.2019)
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HNRNPA2/B1 is upregulated in endocrine-resistant LCC9 breast cancer cells and alters the miRNA transcriptome when overexpressed in MCF-7 cells
Klinge, Carolyn M., Piell, Kellianne M., Tooley, Christine Schaner, Rouchka, Eric C.
Published in Scientific reports (01.07.2019)
Published in Scientific reports (01.07.2019)
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Polystyrene bead ingestion promotes adiposity and cardiometabolic disease in mice
Zhao, Jingjing, Gomes, Daniel, Jin, Lexiao, Mathis, Steven P., Li, Xiaohong, Rouchka, Eric C., Bodduluri, Haribabu, Conklin, Daniel J., O’Toole, Timothy E.
Published in Ecotoxicology and environmental safety (01.03.2022)
Published in Ecotoxicology and environmental safety (01.03.2022)
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rMAPS2: an update of the RNA map analysis and plotting server for alternative splicing regulation
Hwang, Jae Y, Jung, Sungbo, Kook, Tae L, Rouchka, Eric C, Bok, Jinwoong, Park, Juw W
Published in Nucleic acids research (02.07.2020)
Published in Nucleic acids research (02.07.2020)
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rMAPS: RNA map analysis and plotting server for alternative exon regulation
Park, Juw Won, Jung, Sungbo, Rouchka, Eric C, Tseng, Yu-Ting, Xing, Yi
Published in Nucleic acids research (08.07.2016)
Published in Nucleic acids research (08.07.2016)
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The induction of peripheral trained immunity in the pancreas incites anti-tumor activity to control pancreatic cancer progression
Geller, Anne E., Shrestha, Rejeena, Woeste, Matthew R., Guo, Haixun, Hu, Xiaoling, Ding, Chuanlin, Andreeva, Kalina, Chariker, Julia H., Zhou, Mingqian, Tieri, David, Watson, Corey T., Mitchell, Robert A., Zhang, Huang-ge, Li, Yan, Martin II, Robert C. G., Rouchka, Eric C., Yan, Jun
Published in Nature communications (09.02.2022)
Published in Nature communications (09.02.2022)
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A comparison of per sample global scaling and per gene normalization methods for differential expression analysis of RNA-seq data
Li, Xiaohong, Brock, Guy N, Rouchka, Eric C, Cooper, Nigel G F, Wu, Dongfeng, O'Toole, Timothy E, Gill, Ryan S, Eteleeb, Abdallah M, O'Brien, Liz, Rai, Shesh N
Published in PloS one (01.05.2017)
Published in PloS one (01.05.2017)
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Transcriptomic analysis of immune response to bacterial lipopolysaccharide in zebra finch (Taeniopygia guttata)
Scalf, Cassandra S, Chariker, Julia H, Rouchka, Eric C, Ashley, Noah T
Published in BMC genomics (14.08.2019)
Published in BMC genomics (14.08.2019)
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Enhanced oxidative phosphorylation, re-organized intracellular signaling, and epigenetic de-silencing as revealed by oligodendrocyte translatome analysis after contusive spinal cord injury
Forston, Michael D., Wei, George Z., Chariker, Julia H., Stephenson, Tyler, Andres, Kariena, Glover, Charles, Rouchka, Eric C., Whittemore, Scott R., Hetman, Michal
Published in Scientific reports (01.12.2023)
Published in Scientific reports (01.12.2023)
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Decreased ω-6:ω-3 PUFA ratio attenuates ethanol-induced alterations in intestinal homeostasis, microbiota, and liver injury
Warner, Dennis R., Warner, Jeffrey B., Hardesty, Josiah E., Song, Ying L., King, Taylor N., Kang, Jing X., Chen, Chih-Yu, Xie, Shanfu, Yuan, Fang, Prodhan, Md Aminul Islam, Ma, Xipeng, Zhang, Xiang, Rouchka, Eric C., Maddipati, Krishna Rao, Whitlock, Joan, Li, Eric C., Wang, Gary P., McClain, Craig J., Kirpich, Irina A.
Published in Journal of lipid research (01.12.2019)
Published in Journal of lipid research (01.12.2019)
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Genome-Wide Profiling of PARP1 Reveals an Interplay with Gene Regulatory Regions and DNA Methylation
Nalabothula, Narasimharao, Al-jumaily, Taha, Eteleeb, Abdallah M, Flight, Robert M, Xiaorong, Shao, Moseley, Hunter, Rouchka, Eric C, Fondufe-Mittendorf, Yvonne N
Published in PloS one (25.08.2015)
Published in PloS one (25.08.2015)
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Transcriptomic response of breast cancer cells to anacardic acid
Schultz, David J., Krishna, Abirami, Vittitow, Stephany L., Alizadeh-Rad, Negin, Muluhngwi, Penn, Rouchka, Eric C., Klinge, Carolyn M.
Published in Scientific reports (23.05.2018)
Published in Scientific reports (23.05.2018)
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Induction of interferon response by high viral loads at early stage infection may protect against severe outcomes in COVID-19 patients
Rouchka, Eric C., Chariker, Julia H., Alejandro, Brian, Adcock, Robert S., Singhal, Richa, Ramirez, Julio, Palmer, Kenneth E., Lasnik, Amanda B., Carrico, Ruth, Arnold, Forest W., Furmanek, Stephen, Zhang, Mei, Wolf, Leslie A., Waigel, Sabine, Zacharias, Wolfgang, Bordon, Jose, Chung, Donghoon
Published in Scientific reports (03.08.2021)
Published in Scientific reports (03.08.2021)
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Hepatocyte-specific mitogen-activated protein kinase phosphatase 1 in sexual dimorphism and susceptibility to alcohol induced liver injury
Walter, Mary Nancy, Montoya-Durango, Diego, Rodriguez, Walter, Wang, Yali, Zhang, JingWen, Chariker, Julia H, Rouchka, Eric C, Maldonado, Claudio, Bennett, Anton, McClain, Craig James, Barve, Shirish, Gobejishvili, Leila
Published in Frontiers in immunology (01.02.2024)
Published in Frontiers in immunology (01.02.2024)
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Author Correction: HNRNPA2/B1 is upregulated in endocrine-resistant LCC9 breast cancer cells and alters the miRNA transcriptome when overexpressed in MCF-7 cells
Klinge, Carolyn M., Piell, Kellianne M., Tooley, Christine Schaner, Rouchka, Eric C.
Published in Scientific reports (23.04.2021)
Published in Scientific reports (23.04.2021)
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Opposite modulation of functional recovery following contusive spinal cord injury in mice with oligodendrocyte-selective deletions of Atf4 and Chop/Ddit3
Gao, Yonglin, Wei, George Z., Forston, Michael D., Rood, Benjamin, Hodges, Emily R., Burke, Darlene, Andres, Kariena, Morehouse, Johnny, Armstrong, Christine, Glover, Charles, Slomnicki, Lukasz P., Ding, Jixiang, Chariker, Julia H., Rouchka, Eric C., Saraswat Ohri, Sujata, Whittemore, Scott R., Hetman, Michal
Published in Scientific reports (06.06.2023)
Published in Scientific reports (06.06.2023)
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A specific low-density neutrophil population correlates with hypercoagulation and disease severity in hospitalized COVID-19 patients
Morrissey, Samantha M, Geller, Anne E, Hu, Xiaoling, Tieri, David, Ding, Chuanlin, Klaes, Christopher K, Cooke, Elizabeth A, Woeste, Matthew R, Martin, Zachary C, Chen, Oscar, Bush, Sarah E, Zhang, Huang-Ge, Cavallazzi, Rodrigo, Clifford, Sean P, Chen, James, Ghare, Smita, Barve, Shirish S, Cai, Lu, Kong, Maiying, Rouchka, Eric C, McLeish, Kenneth R, Uriarte, Silvia M, Watson, Corey T, Huang, Jiapeng, Yan, Jun
Published in JCI insight (10.05.2021)
Published in JCI insight (10.05.2021)
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