Development of a time-series shotgun metagenomics database for monitoring microbial communities at the Pacific coast of Japan
Yoshitake, Kazutoshi, Kimura, Gaku, Sakami, Tomoko, Watanabe, Tsuyoshi, Taniuchi, Yukiko, Kakehi, Shigeho, Kuwata, Akira, Yamaguchi, Haruyo, Kataoka, Takafumi, Kawachi, Masanobu, Ikeo, Kazuho, Tan, Engkong, Igarashi, Yoji, Ohtsubo, Masafumi, Watabe, Shugo, Suzuki, Yutaka, Asakawa, Shuichi, Ishino, Sonoko, Tashiro, Kosuke, Ishino, Yoshizumi, Kobayashi, Takanori, Mineta, Katsuhiko, Gojobori, Takashi
Published in Scientific reports (09.06.2021)
Published in Scientific reports (09.06.2021)
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Journal Article
Metagenomic analysis provides functional insights into seasonal change of a non-cyanobacterial prokaryotic community in temperate coastal waters
Matsumoto, Kaoru, Sakami, Tomoko, Watanabe, Tsuyoshi, Taniuchi, Yukiko, Kuwata, Akira, Kakehi, Shigeho, Engkong, Tan, Igarashi, Yoji, Kinoshita, Shigeharu, Asakawa, Shuichi, Hattori, Masahira, Watabe, Shugo, Ishino, Yoshizumi, Kobayashi, Takanori, Gojobori, Takashi, Ikeo, Kazuho
Published in PloS one (12.10.2021)
Published in PloS one (12.10.2021)
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Journal Article
Changes in free amino acid concentrations and associated gene expression profiles in the abdominal muscle of kuruma shrimp (Marsupenaeus japonicus) acclimated at different salinities
Koyama Hiroki, Nanami, Mizusawa, Hoashi Masataka, Tan Engkong, Ko, Yasumoto, Jimbo Mitsuru, Ikeda Daisuke, Yokoyama Takehiko, Asakawa Shuichi, Piyapattanakorn Sanit, Watabe Shugo
Published in Journal of experimental biology (01.06.2018)
Published in Journal of experimental biology (01.06.2018)
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Journal Article
Determination of thermal tolerance in rainbow trout Oncorhynchus mykiss based on effective time, and its reproducibility for a large number of fish
Ineno, Toshinao, Yamada, Kazuya, Tamaki, Koichi, Kodama, Ryusuke, Tan, Engkong, Kinoshita, Shigeharu, Muto, Koji, Yada, Takashi, Kitamura, Shoji, Asakawa, Shuichi, Watabe, Shugo
Published in Fisheries science (01.09.2020)
Published in Fisheries science (01.09.2020)
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Journal Article
Transcriptional responses of a bicarbonate-tolerant monocot, Puccinellia tenuiflora, and a related bicarbonate-sensitive species, Poa annua, to NaHCO3 stress
Kobayashi, Shio, Satone, Hina, Tan, Engkong, Kurokochi, Hiroyuki, Asakawa, Shuichi, Liu, Shenkui, Takano, Tetsuo
Published in International journal of molecular sciences (29.12.2014)
Published in International journal of molecular sciences (29.12.2014)
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Journal Article
Different gene expression profiles between normal and thermally selected strains of rainbow trout, Oncorhynchus mykiss, as revealed by comprehensive transcriptome analysis
Tan, Engkong, Kinoshita, Shigeharu, Suzuki, Yutaka, Ineno, Toshinao, Tamaki, Koichi, Kera, Akio, Muto, Koji, Yada, Takashi, Kitamura, Shoji, Asakawa, Shuichi, Watabe, Shugo
Published in Gene (01.02.2016)
Published in Gene (01.02.2016)
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Journal Article
Characterization of the torafugu (Takifugu rubripes) immunoglobulin heavy chain gene locus
Fu, Xi, Zhang, Hong, Tan, Engkong, Watabe, Shugo, Asakawa, Shuichi
Published in Immunogenetics (New York) (01.03.2015)
Published in Immunogenetics (New York) (01.03.2015)
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Journal Article
Evaluation of the thermal tolerances of different strains of rainbow trout Oncorhynchus mykiss by measuring the effective time required for loss of equilibrium at an approximate upper lethal temperature
Ineno, Toshinao, Tamaki, Koichi, Yamada, Kazuya, Kodama, Ryusuke, Tan, Engkong, Kinoshita, Shigeharu, Muto, Koji, Yada, Takashi, Kitamura, Shoji, Asakawa, Shuichi, Watabe, Shugo
Published in Fisheries science (13.09.2019)
Published in Fisheries science (13.09.2019)
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Journal Article
Thermal tolerance of a thermally selected strain of rainbow trout Oncorhynchus mykiss and the pedigrees of its F1 and F2 generations indicated by their critical thermal maxima
Ineno, Toshinao, Tamaki, Koichi, Yamada, Kazuya, Kodama, Ryusuke, Tsuchida, Shuji, Tan, Engkong, Kinoshita, Shigeharu, Muto, Koji, Yada, Takashi, Kitamura, Shoji, Asakawa, Shuichi, Watabe, Shugo
Published in Fisheries science (01.07.2018)
Published in Fisheries science (01.07.2018)
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Journal Article
High-Throughput Sequencing of the Expressed Torafugu ( Takifugu rubripes ) Antibody Sequences Distinguishes IgM and IgT Repertoires and Reveals Evidence of Convergent Evolution
Fu, Xi, Sun, Jianqiang, Tan, Engkong, Shimizu, Kentaro, Reza, Md Shaheed, Watabe, Shugo, Asakawa, Shuichi
Published in Frontiers in immunology (21.02.2018)
Published in Frontiers in immunology (21.02.2018)
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Journal Article
Changes in free amino acid concentrations and associated gene expression profiles in the abdominal muscle of kuruma shrimp Marsupenaeus japonicus acclimated at different salinities
Koyama, Hiroki, Mizusawa, Nanami, Hoashi, Masataka, Tan, Engkong, Yasumoto, Ko, Jimbo, Mitsuru, Ikeda, Daisuke, Yokoyama, Takehiko, Asakawa, Shuichi, Piyapattanakorn, Sanit, Watabe, Shugo
Published in Journal of experimental biology (01.01.2018)
Published in Journal of experimental biology (01.01.2018)
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Journal Article
Development of 18 microsatellite markers in Pieris japonica, a poisonous tree insulated from the browsing pressure of herbivores, using a next-generation sequencer
Kurokochi, Hiroyuki, Tan, Engkong, Asakawa, Shuichi, Lian, Chunlan
Published in Journal of forest research (01.02.2015)
Published in Journal of forest research (01.02.2015)
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Journal Article
Ultrahigh-Density Linkage Map Construction Using Low-Coverage Whole-Genome Sequencing of a Doubled Haploid Population: Case Study of Torafugu (Takifugu rubripes)
Zhang, Xiang, Mizukoshi, Misaki, Zhang, Hong, Tan, Engkong, Igarashi, Yoji, Suzuki, Yutaka, Mitsuyama, Susumu, Kinoshita, Shigeharu, Saito, Kazuyoshi, Watabe, Shugo, Asakawa, Shuichi
Published in Genes (26.02.2018)
Published in Genes (26.02.2018)
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Journal Article
Whole-Genome Sequencing of 84 Japanese Eels Reveals Evidence against Panmixia and Support for Sympatric Speciation
Igarashi, Yoji, Zhang, Hong, Tan, Engkong, Sekino, Masashi, Yoshitake, Kazutoshi, Kinoshita, Shigeharu, Mitsuyama, Susumu, Yoshinaga, Tatsuki, Chow, Seinen, Kurogi, Hiroaki, Shinoda, Akira, Han, Yu-San, Wakiya, Ryoshiro, Mochioka, Noritaka, Yamamoto, Toshihiro, Kuwada, Hiroshi, Kaji, Yoshitsugu, Suzuki, Yutaka, Gojobori, Takashi, Kobayashi, Takanori, Saitoh, Kenji, Watabe, Shugo, Asakawa, Shuichi
Published in Genes (28.09.2018)
Published in Genes (28.09.2018)
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Journal Article
Development of polymorphic chloroplast DNA markers for the endangered tree Eusideroxylon zwageri through chloroplast isolation and next-generation sequencing
Kurokochi, Hiroyuki, Nurtjahjaningsih, I. L. G, Sukartiningsih, Tan, Engkong, Asakawa, Shuichi, Saito, Yoko, Ide, Yuji
Published in Conservation genetics resources (01.12.2015)
Published in Conservation genetics resources (01.12.2015)
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Journal Article
Transcriptome analysis of tetrodotoxin sensing and tetrodotoxin action in the central nervous system of tiger puffer Takifugu rubripes juveniles
Okita, Kogen, Tan, Engkong, Satone, Hina, Kinoshita, Shigeharu, Asakawa, Shuichi, Ojima, Daisuke, Yamazaki, Hideki, Sakiyama, Kazutaka, Takatani, Tomohiro, Arakawa, Osamu, Hagiwara, Atsushi, Sakakura, Yoshitaka
Published in Fisheries science (01.05.2017)
Published in Fisheries science (01.05.2017)
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Journal Article
Local-Level Genetic Diversity and Structure of Matsutake Mushroom (Tricholoma matsutake) Populations in Nagano Prefecture, Japan, Revealed by 15 Microsatellite Markers
Kurokochi, Hiroyuki, Zhang, Shijie, Takeuchi, Yoshie, Tan, Engkong, Asakawa, Shuichi, Lian, Chunlan
Published in Journal of fungi (Basel) (11.05.2017)
Published in Journal of fungi (Basel) (11.05.2017)
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Journal Article
Development of 13 polymorphic chloroplast DNA markers in Quercus gilva, a regionally endemic species in Japan
Sugiura, Nami, Kurokochi, Hiroyuki, Tan, Engkong, Asakawa, Shuichi, Sato, Naoki, Saito, Yoko, Ide, Yuji
Published in Conservation genetics resources (01.12.2014)
Published in Conservation genetics resources (01.12.2014)
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Journal Article
Fifteen novel microsatellite markers for two Amphiprion species (Amphiprion frenatus and Amphiprion perideraion) and cross-species amplification
Sato, Masaaki, Kurokochi, Hiroyuki, Tan, Engkong, Asakawa, Shuichi, Honda, Kentaro, Bolisay, Klenthon O, Nakamura, Yohei, Lian, Chunlan, Fortes, Miguel D, Nakaoka, Masahiro
Published in Conservation genetics resources (01.09.2014)
Published in Conservation genetics resources (01.09.2014)
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Journal Article
Global gene expression analysis of gill tissues from normal and thermally selected strains of rainbow trout
Tan, Engkong, Wongwarangkana, Chaninya, Kinoshita, Shigeharu, Suzuki, Yutaka, Oshima, Kenshiro, Hattori, Masahira, Ineno, Toshinao, Tamaki, Koichi, Kera, Akio, Muto, Koji, Yada, Takashi, Kitamura, Shoji, Asakawa, Shuichi, Watabe, Shugo
Published in Fisheries science (01.09.2012)
Published in Fisheries science (01.09.2012)
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Journal Article