Extensive introgression in a malaria vector species complex revealed by phylogenomics
Fontaine, Michael C., Pease, James B., Steele, Aaron, Waterhouse, Robert M., Neafsey, Daniel E., Sharakhov, Igor V., Jiang, Xiaofang, Hall, Andrew B., Catteruccia, Flaminia, Kakani, Evdoxia, Mitchell, Sara N., Wu, Yi-Chieh, Smith, Hilary A., Love, R. Rebecca, Lawniczak, Mara K., Slotman, Michel A., Emrich, Scott J., Hahn, Matthew W., Besansky, Nora J.
Published in Science (American Association for the Advancement of Science) (02.01.2015)
Published in Science (American Association for the Advancement of Science) (02.01.2015)
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Whole genome comparisons reveal panmixia among fall armyworm (Spodoptera frugiperda) from diverse locations
Schlum, Katrina A, Lamour, Kurt, de Bortoli, Caroline Placidi, Banerjee, Rahul, Meagher, Robert, Pereira, Eliseu, Murua, Maria Gabriela, Sword, Gregory A, Tessnow, Ashley E, Viteri Dillon, Diego, Linares Ramirez, Angela M, Akutse, Komivi S, Schmidt-Jeffris, Rebecca, Huang, Fangneng, Reisig, Dominic, Emrich, Scott J, Jurat-Fuentes, Juan Luis
Published in BMC genomics (12.03.2021)
Published in BMC genomics (12.03.2021)
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Journal Article
Gene discovery and annotation using LCM-454 transcriptome sequencing
Emrich, Scott J, Barbazuk, W Brad, Li, Li, Schnable, Patrick S
Published in Genome Research (01.01.2007)
Published in Genome Research (01.01.2007)
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Journal Article
SNP discovery via 454 transcriptome sequencing
Barbazuk, W. Brad, Emrich, Scott J, Chen, Hsin D, Li, Li, Schnable, Patrick S
Published in The Plant journal : for cell and molecular biology (01.09.2007)
Published in The Plant journal : for cell and molecular biology (01.09.2007)
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Journal Article
Analysis of computational codon usage models and their association with translationally slow codons
Wright, Gabriel, Rodriguez, Anabel, Li, Jun, Clark, Patricia L, Milenković, Tijana, Emrich, Scott J
Published in PloS one (30.04.2020)
Published in PloS one (30.04.2020)
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Journal Article
VectorBase: improvements to a bioinformatics resource for invertebrate vector genomics
Megy, Karine, Emrich, Scott J., Lawson, Daniel, Campbell, David, Dialynas, Emmanuel, Hughes, Daniel S.T., Koscielny, Gautier, Louis, Christos, MacCallum, Robert M., Redmond, Seth N., Sheehan, Andrew, Topalis, Pantelis, Wilson, Derek
Published in Nucleic acids research (01.01.2012)
Published in Nucleic acids research (01.01.2012)
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Journal Article
Radical remodeling of the Y chromosome in a recent radiation of malaria mosquitoes
Hall, Andrew Brantley, Papathanos, Philippos-Aris, Sharma, Atashi, Cheng, Changde, Akbari, Omar S., Assour, Lauren, Bergman, Nicholas H., Cagnetti, Alessia, Crisanti, Andrea, Dottorini, Tania, Fiorentini, Elisa, Galizi, Roberto, Hnath, Jonathan, Jiang, Xiaofang, Koren, Sergey, Nolan, Tony, Radune, Diane, Sharakhova, Maria V., Steele, Aaron, Timoshevskiy, Vladimir A., Windbichler, Nikolai, Zhang, Simo, Hahn, Matthew W., Phillippy, Adam M., Emrich, Scott J., Sharakhov, Igor V., Tu, Zhijian Jake, Besansky, Nora J.
Published in Proceedings of the National Academy of Sciences - PNAS (12.04.2016)
Published in Proceedings of the National Academy of Sciences - PNAS (12.04.2016)
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Journal Article
Profiling expression strategies for a type III polyketide synthase in a lysate-based, cell-free system
Sword, Tien T, Dinglasan, Jaime Lorenzo N, Abbas, Ghaeath S. K, Barker, J. William, Spradley, Madeline E, Greene, Elijah R, Gooden, Damian S, Emrich, Scott J, Gilchrist, Michael A, Doktycz, Mitchel J, Bailey, Constance B
Published in Scientific reports (06.06.2024)
Published in Scientific reports (06.06.2024)
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Journal Article
GRAFENE: Graphlet-based alignment-free network approach integrates 3D structural and sequence (residue order) data to improve protein structural comparison
Faisal, Fazle E, Newaz, Khalique, Chaney, Julie L, Li, Jun, Emrich, Scott J, Clark, Patricia L, Milenković, Tijana
Published in Scientific reports (02.11.2017)
Published in Scientific reports (02.11.2017)
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Journal Article
Chromosomal inversions and ecotypic differentiation in Anopheles gambiae: the perspective from whole-genome sequencing
Love, R. Rebecca, Steele, Aaron M., Coulibaly, Mamadou B., Traore, Sékou F., Emrich, Scott J., Fontaine, Michael C., Besansky, Nora J.
Published in Molecular ecology (01.12.2016)
Published in Molecular ecology (01.12.2016)
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Journal Article
Evolutionary superscaffolding and chromosome anchoring to improve Anopheles genome assemblies
Waterhouse, Robert M, Aganezov, Sergey, Anselmetti, Yoann, Lee, Jiyoung, Ruzzante, Livio, Reijnders, Maarten J M F, Feron, Romain, Bérard, Sèverine, George, Phillip, Hahn, Matthew W, Howell, Paul I, Kamali, Maryam, Koren, Sergey, Lawson, Daniel, Maslen, Gareth, Peery, Ashley, Phillippy, Adam M, Sharakhova, Maria V, Tannier, Eric, Unger, Maria F, Zhang, Simo V, Alekseyev, Max A, Besansky, Nora J, Chauve, Cedric, Emrich, Scott J, Sharakhov, Igor V
Published in BMC biology (02.01.2020)
Published in BMC biology (02.01.2020)
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Journal Article
PeakMatcher facilitates updated Aedes aegypti embryonic cis-regulatory element map
Nowling, Ronald J, Behura, Susanta K, Halfon, Marc S, Emrich, Scott J, Duman-Scheel, Molly
Published in Hereditas (28.01.2021)
Published in Hereditas (28.01.2021)
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Journal Article
Genetic Screening to Identify Candidate Resistance Alleles to Cry1F Corn in Fall Armyworm Using Targeted Sequencing
Schlum, Katrina, Lamour, Kurt, Tandy, Peter, Emrich, Scott J., de Bortoli, Caroline Placidi, Rao, Tejas, Viteri Dillon, Diego M., Linares-Ramirez, Angela M., Jurat-Fuentes, Juan Luis
Published in Insects (Basel, Switzerland) (08.07.2021)
Published in Insects (Basel, Switzerland) (08.07.2021)
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Journal Article
Reduced-representation sequencing identifies small effective population sizes of Anopheles gambiae in the north-western Lake Victoria basin, Uganda
Wiltshire, Rachel M, Bergey, Christina M, Kayondo, Jonathan K, Birungi, Josephine, Mukwaya, Louis G, Emrich, Scott J, Besansky, Nora J, Collins, Frank H
Published in Malaria journal (06.08.2018)
Published in Malaria journal (06.08.2018)
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