Drug target prediction and repositioning using an integrated network-based approach
Emig, Dorothea, Ivliev, Alexander, Pustovalova, Olga, Lancashire, Lee, Bureeva, Svetlana, Nikolsky, Yuri, Bessarabova, Marina
Published in PloS one (04.04.2013)
Published in PloS one (04.04.2013)
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Journal Article
AltAnalyze and DomainGraph: analyzing and visualizing exon expression data
Emig, Dorothea, Salomonis, Nathan, Baumbach, Jan, Lengauer, Thomas, Conklin, Bruce R, Albrecht, Mario
Published in Nucleic acids research (01.07.2010)
Published in Nucleic acids research (01.07.2010)
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Journal Article
ExpansionHunter: a sequence-graph-based tool to analyze variation in short tandem repeat regions
Dolzhenko, Egor, Deshpande, Viraj, Schlesinger, Felix, Krusche, Peter, Petrovski, Roman, Chen, Sai, Emig-Agius, Dorothea, Gross, Andrew, Narzisi, Giuseppe, Bowman, Brett, Scheffler, Konrad, van Vugt, Joke J F A, French, Courtney, Sanchis-Juan, Alba, Ibáñez, Kristina, Tucci, Arianna, Lajoie, Bryan R, Veldink, Jan H, Raymond, F Lucy, Taft, Ryan J, Bentley, David R, Eberle, Michael A
Published in Bioinformatics (01.11.2019)
Published in Bioinformatics (01.11.2019)
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Journal Article
Systems-based analyses of brain regions functionally impacted in Parkinson's disease reveals underlying causal mechanisms
Riley, Brigit E, Gardai, Shyra J, Emig-Agius, Dorothea, Bessarabova, Marina, Ivliev, Alexander E, Schüle, Birgitt, Schüle, Birgit, Alexander, Jeff, Wallace, William, Halliday, Glenda M, Langston, J William, Braxton, Scott, Yednock, Ted, Shaler, Thomas, Johnston, Jennifer A
Published in PloS one (29.08.2014)
Published in PloS one (29.08.2014)
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Journal Article
Identification of genome-wide targets of Olig2 in the adult mouse spinal cord using ChIP-Seq
Darr, Andrew J, Danzi, Matt C, Brady, Lee, Emig-Agius, Dorothea, Hackett, Amber, Golshani, Roozbeh, Warner, Nikita, Lee, Jae, Lemmon, Vance P, Tsoulfas, Pantelis
Published in PloS one (19.10.2017)
Published in PloS one (19.10.2017)
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Journal Article
An integrated map of HIV-human protein complexes that facilitate viral infection
Emig-Agius, Dorothea, Olivieri, Kevin, Pache, Lars, Shih, Hsin Ling, Pustovalova, Olga, Bessarabova, Marina, Young, John A T, Chanda, Sumit K, Ideker, Trey
Published in PloS one (09.05.2014)
Published in PloS one (09.05.2014)
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Journal Article
Integrative Visual Analysis of the Effects of Alternative Splicing on Protein Domain Interaction Networks
Emig, Dorothea, Cline, Melissa S., Klein, Karsten, Kunert, Anne, Mutzel, Petra, Lengauer, Thomas, Albrecht, Mario
Published in Journal of integrative bioinformatics (01.06.2008)
Published in Journal of integrative bioinformatics (01.06.2008)
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Journal Article
Specificity of linear motifs that bind to a common mitogen-activated protein kinase docking groove
Garai, Ágnes, Zeke, András, Gógl, Gergő, Törő, Imre, Fördős, Ferenc, Blankenburg, Hagen, Bárkai, Tünde, Varga, János, Alexa, Anita, Emig, Dorothea, Albrecht, Mario, Reményi, Attila
Published in Science signaling (09.10.2012)
Published in Science signaling (09.10.2012)
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Journal Article
Partitioning biological data with transitivity clustering
Baumbach, Jan, Wittkop, Tobias, Emig, Dorothea, Lange, Sita, Rahmann, Sven, Albrecht, Mario, Morris, John H, Böcker, Sebastian, Stoye, Jens
Published in Nature methods (01.06.2010)
Published in Nature methods (01.06.2010)
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Journal Article
Comprehensive cluster analysis with Transitivity Clustering
Baumbach, Jan, Wittkop, Tobias, Emig, Dorothea, Truss, Anke, Albrecht, Mario, Böcker, Sebastian
Published in Nature protocols (01.03.2011)
Published in Nature protocols (01.03.2011)
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Journal Article
Measuring and analyzing tissue specificity of human genes and protein complexes
Emig, Dorothea, Kacprowski, Tim, Albrecht, Mario
Published in EURASIP journal on bioinformatics & systems biology (04.08.2011)
Published in EURASIP journal on bioinformatics & systems biology (04.08.2011)
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Journal Article
Integrating expression data with domain interaction networks
Emig, Dorothea, Cline, Melissa S., Lengauer, Thomas, Albrecht, Mario
Published in Bioinformatics (01.11.2008)
Published in Bioinformatics (01.11.2008)
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Journal Article
CONTEXT OF VULNERABILITY OF GBM: DESCRIPTIVE GENOMICS LEADING TO EMPIRIC THERAPEUTICS
Berens, M. E., Kim, S., Kiefer, J., Dhruv, H., Vuori, K., Findlay, B., Hauser, C., Oshima, R., Alza-Blanc, P., Emig, D.
Published in Neuro-oncology (Charlottesville, Va.) (01.07.2014)
Published in Neuro-oncology (Charlottesville, Va.) (01.07.2014)
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Journal Article
Pisces: an accurate and versatile variant caller for somatic and germline next-generation sequencing data
Dunn, Tamsen, Berry, Gwenn, Emig-Agius, Dorothea, Jiang, Yu, Lei, Serena, Iyer, Anita, Udar, Nitin, Chuang, Han-Yu, Hegarty, Jeff, Dickover, Michael, Klotzle, Brandy, Robbins, Justin, Bibikova, Marina, Peeters, Marc, Strömberg, Michael
Published in Bioinformatics (Oxford, England) (01.05.2019)
Published in Bioinformatics (Oxford, England) (01.05.2019)
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Journal Article
DASMI: exchanging, annotating and assessing molecular interaction data
Blankenburg, Hagen, Finn, Robert D., Prlić, Andreas, Jenkinson, Andrew M., Ramírez, Fidel, Emig, Dorothea, Schelhorn, Sven-Eric, Büch, Joachim, Lengauer, Thomas, Albrecht, Mario
Published in Bioinformatics (15.05.2009)
Published in Bioinformatics (15.05.2009)
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Journal Article