MaizeGDB 2018: the maize multi-genome genetics and genomics database
Portwood, John L, Woodhouse, Margaret R, Cannon, Ethalinda K, Gardiner, Jack M, Harper, Lisa C, Schaeffer, Mary L, Walsh, Jesse R, Sen, Taner Z, Cho, Kyoung Tak, Schott, David A, Braun, Bremen L, Dietze, Miranda, Dunfee, Brittney, Elsik, Christine G, Manchanda, Nancy, Coe, Ed, Sachs, Marty, Stinard, Philip, Tolbert, Josh, Zimmerman, Shane, Andorf, Carson M
Published in Nucleic acids research (08.01.2019)
Published in Nucleic acids research (08.01.2019)
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Apollo: Democratizing genome annotation
Dunn, Nathan A, Unni, Deepak R, Diesh, Colin, Munoz-Torres, Monica, Harris, Nomi L, Yao, Eric, Rasche, Helena, Holmes, Ian H, Elsik, Christine G, Lewis, Suzanna E
Published in PLoS computational biology (01.02.2019)
Published in PLoS computational biology (01.02.2019)
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Characterization of global loss of imprinting in fetal overgrowth syndrome induced by assisted reproduction
Chen, Zhiyuan, Hagen, Darren E., Elsik, Christine G., Ji, Tieming, Morris, Collin James, Moon, Laura Emily, Rivera, Rocío Melissa
Published in Proceedings of the National Academy of Sciences - PNAS (14.04.2015)
Published in Proceedings of the National Academy of Sciences - PNAS (14.04.2015)
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Molecular traces of alternative social organization in a termite genome
Terrapon, Nicolas, Li, Cai, Robertson, Hugh M., Ji, Lu, Meng, Xuehong, Booth, Warren, Chen, Zhensheng, Childers, Christopher P., Glastad, Karl M., Gokhale, Kaustubh, Gowin, Johannes, Gronenberg, Wulfila, Hermansen, Russell A., Hu, Haofu, Hunt, Brendan G., Huylmans, Ann Kathrin, Khalil, Sayed M. S., Mitchell, Robert D., Munoz-Torres, Monica C., Mustard, Julie A., Pan, Hailin, Reese, Justin T., Scharf, Michael E., Sun, Fengming, Vogel, Heiko, Xiao, Jin, Yang, Wei, Yang, Zhikai, Yang, Zuoquan, Zhou, Jiajian, Zhu, Jiwei, Brent, Colin S., Elsik, Christine G., Goodisman, Michael A. D., Liberles, David A., Roe, R. Michael, Vargo, Edward L., Vilcinskas, Andreas, Wang, Jun, Bornberg-Bauer, Erich, Korb, Judith, Zhang, Guojie, Liebig, Jürgen
Published in Nature communications (20.05.2014)
Published in Nature communications (20.05.2014)
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Multi-tiered analyses of honey bees that resist or succumb to parasitic mites and viruses
Weaver, Daniel B, Cantarel, Brandi L, Elsik, Christine G, Boncristiani, Dawn L, Evans, Jay D
Published in BMC genomics (06.10.2021)
Published in BMC genomics (06.10.2021)
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Telomere-to-telomere assemblies of cattle and sheep Y-chromosomes uncover divergent structure and gene content
Olagunju, Temitayo A., Rosen, Benjamin D., Neibergs, Holly L., Becker, Gabrielle M., Davenport, Kimberly M., Elsik, Christine G., Hadfield, Tracy S., Koren, Sergey, Kuhn, Kristen L., Rhie, Arang, Shira, Katie A., Skibiel, Amy L., Stegemiller, Morgan R., Thorne, Jacob W., Villamediana, Patricia, Cockett, Noelle E., Murdoch, Brenda M., Smith, Timothy P. L.
Published in Nature communications (27.09.2024)
Published in Nature communications (27.09.2024)
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Web Apollo: a web-based genomic annotation editing platform
Lee, Eduardo, Helt, Gregg A, Reese, Justin T, Munoz-Torres, Monica C, Childers, Chris P, Buels, Robert M, Stein, Lincoln, Holmes, Ian H, Elsik, Christine G, Lewis, Suzanna E
Published in Genome biology (30.08.2013)
Published in Genome biology (30.08.2013)
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The genomic basis of evolutionary differentiation among honey bees
Fouks, Bertrand, Brand, Philipp, Nguyen, Hung N, Herman, Jacob, Camara, Francisco, Ence, Daniel, Hagen, Darren, Hoff, Katherina J, Nachweide, Stefanie, Romoth, Lars, Walden, Kimberly Ko, Guigo, Roderic, Stanke, Mario, Narzisi, Giuseppe, Yandell, Mark, Robertson, Hugh M, Koeniger, Nikolaus, Chantawannakul, Panuwan, Schatz, Michael C, Worley, Kim C, Robinson, Gene E, Elsik, Christine G, Rueppell, Olav
Published in Genome research (01.07.2021)
Published in Genome research (01.07.2021)
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A chromosome-level assembly of the cat flea genome uncovers rampant gene duplication and genome size plasticity
Driscoll, Timothy P, Verhoeve, Victoria I, Gillespie, Joseph J, Johnston, J Spencer, Guillotte, Mark L, Rennoll-Bankert, Kristen E, Rahman, M Sayeedur, Hagen, Darren, Elsik, Christine G, Macaluso, Kevin R, Azad, Abdu F
Published in BMC biology (19.06.2020)
Published in BMC biology (19.06.2020)
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Identification of large offspring syndrome during pregnancy through ultrasonography and maternal blood transcriptome analyses
Rivera, Rocío Melissa, Goldkamp, Anna Katherine, Patel, Bhaumik Narendrabhai, Hagen, Darren Erich, Soto-Moreno, Edgar Joel, Li, Yahan, Kim, Chris Nayoon, Miller, Cliff, Williams, Fred, Jannaman, Elizabeth, Xiao, Yao, Tribulo, Paula, Estrada-Cortés, Eliab, Brau-Rodríguez, Astrid Roshealy, Hansen, Peter James, Wu, Zhoulin, Spinka, Christine Marie, Martin, Neal, Elsik, Christine G.
Published in Scientific reports (22.06.2022)
Published in Scientific reports (22.06.2022)
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RNA-Seq reveals early distinctions and late convergence of gene expression between diapause and quiescence in the Asian tiger mosquito, Aedes albopictus
Poelchau, Monica F, Reynolds, Julie A, Elsik, Christine G, Denlinger, David L, Armbruster, Peter A
Published in Journal of experimental biology (01.11.2013)
Published in Journal of experimental biology (01.11.2013)
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Journal Article
MaizeMine: A Data Mining Warehouse for the Maize Genetics and Genomics Database
Shamimuzzaman, Md, Gardiner, Jack M., Walsh, Amy T., Triant, Deborah A., Le Tourneau, Justin J., Tayal, Aditi, Unni, Deepak R., Nguyen, Hung N., Portwood, John L., Cannon, Ethalinda K. S., Andorf, Carson M., Elsik, Christine G.
Published in Frontiers in plant science (22.10.2020)
Published in Frontiers in plant science (22.10.2020)
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Journal Article
Discovery of candidate genes and pathways in the endometrium regulating ovine blastocyst growth and conceptus elongation
Satterfield, M. Carey, Song, Gwonhwa, Kochan, Kelli J, Riggs, Penny K, Simmons, Rebecca M, Elsik, Christine G, Adelson, David L, Bazer, Fuller W, Zhou, Huaijun, Spencer, Thomas E
Published in Physiological genomics (07.10.2009)
Published in Physiological genomics (07.10.2009)
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JBrowse: a dynamic web platform for genome visualization and analysis
Buels, Robert, Yao, Eric, Diesh, Colin M, Hayes, Richard D, Munoz-Torres, Monica, Helt, Gregg, Goodstein, David M, Elsik, Christine G, Lewis, Suzanna E, Stein, Lincoln, Holmes, Ian H
Published in Genome Biology (12.04.2016)
Published in Genome Biology (12.04.2016)
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Journal Article
Computational and transcriptional evidence for microRNAs in the honey bee genome
Weaver, Daniel B, Anzola, Juan M, Evans, Jay D, Reid, Jeffrey G, Reese, Justin T, Childs, Kevin L, Zdobnov, Evgeny M, Samanta, Manoj P, Miller, Jonathan, Elsik, Christine G
Published in Genome biology (01.06.2007)
Published in Genome biology (01.06.2007)
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