Protein-RNA interface residue prediction using machine learning: an assessment of the state of the art
Walia, Rasna R, Caragea, Cornelia, Lewis, Benjamin A, Towfic, Fadi, Terribilini, Michael, El-Manzalawy, Yasser, Dobbs, Drena, Honavar, Vasant
Published in BMC bioinformatics (10.05.2012)
Published in BMC bioinformatics (10.05.2012)
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Journal Article
DockRank: Ranking docked conformations using partner-specific sequence homology-based protein interface prediction
Xue, Li C., Jordan, Rafael A., Yasser, EL-Manzalawy, Dobbs, Drena, Honavar, Vasant
Published in Proteins, structure, function, and bioinformatics (01.02.2014)
Published in Proteins, structure, function, and bioinformatics (01.02.2014)
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Journal Article
RNABindRPlus: a predictor that combines machine learning and sequence homology-based methods to improve the reliability of predicted RNA-binding residues in proteins
Walia, Rasna R, Xue, Li C, Wilkins, Katherine, El-Manzalawy, Yasser, Dobbs, Drena, Honavar, Vasant
Published in PloS one (20.05.2014)
Published in PloS one (20.05.2014)
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Journal Article
Predicting linear B-cell epitopes using string kernels
EL-Manzalawy, Yasser, Dobbs, Drena, Honavar, Vasant
Published in Journal of molecular recognition (01.07.2008)
Published in Journal of molecular recognition (01.07.2008)
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Journal Article
Predicting protein-protein interface residues using local surface structural similarity
Jordan, Rafael A, El-Manzalawy, Yasser, Dobbs, Drena, Honavar, Vasant
Published in BMC bioinformatics (18.03.2012)
Published in BMC bioinformatics (18.03.2012)
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Journal Article
In Silico Prediction of Linear B-Cell Epitopes on Proteins
El-Manzalawy, Yasser, Dobbs, Drena, Honavar, Vasant G
Published in Methods in molecular biology (Clifton, N.J.) (01.01.2017)
Published in Methods in molecular biology (Clifton, N.J.) (01.01.2017)
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Journal Article
Biomarker discovery in inflammatory bowel diseases using network-based feature selection
Abbas, Mostafa, Matta, John, Le, Thanh, Bensmail, Halima, Obafemi-Ajayi, Tayo, Honavar, Vasant, El-Manzalawy, Yasser
Published in PloS one (22.11.2019)
Published in PloS one (22.11.2019)
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Journal Article
FastRNABindR: Fast and Accurate Prediction of Protein-RNA Interface Residues
El-Manzalawy, Yasser, Abbas, Mostafa, Malluhi, Qutaibah, Honavar, Vasant
Published in PloS one (06.07.2016)
Published in PloS one (06.07.2016)
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Journal Article
Sequence-Based Prediction of RNA-Binding Residues in Proteins
Walia, Rasna R, El-Manzalawy, Yasser, Honavar, Vasant G, Dobbs, Drena
Published in Methods in molecular biology (Clifton, N.J.) (01.01.2017)
Published in Methods in molecular biology (Clifton, N.J.) (01.01.2017)
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Journal Article
Abstract 17465: Analysis of Intra-Operative Heart Rates Reveals a Novel Sub-Phenotype in Coronary Artery Bypass Grafting Patients
Abbas, Mostafa, Morland, Thomas, Kirchner, H Lester, Hall, Eric S, Shuhaiber, Jeffrey, El-Manzalawy, Yasser
Published in Circulation (New York, N.Y.) (07.11.2023)
Published in Circulation (New York, N.Y.) (07.11.2023)
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