by Wu, Martin, Eisen, Jonathan A
Published in Genome biology (13.10.2008)

by Chandler, James Angus, Lang, Jenna Morgan, Bhatnagar, Srijak, Eisen, Jonathan A, Kopp, Artyom
Published in PLoS genetics (01.09.2011)

by Van Deynze, Allen, Zamora, Pablo, Delaux, Pierre-Marc, Heitmann, Cristobal, Jayaraman, Dhileepkumar, Rajasekar, Shanmugam, Graham, Danielle, Maeda, Junko, Gibson, Donald, Schwartz, Kevin D, Berry, Alison M, Bhatnagar, Srijak, Jospin, Guillaume, Darling, Aaron, Jeannotte, Richard, Lopez, Javier, Weimer, Bart C, Eisen, Jonathan A, Shapiro, Howard-Yana, Ané, Jean-Michel, Bennett, Alan B
Published in PLoS biology (07.08.2018)

by Edwards, Joseph, Johnson, Cameron, Santos-Medellín, Christian, Lurie, Eugene, Podishetty, Natraj Kumar, Bhatnagar, Srijak, Eisen, Jonathan A., Sundaresan, Venkatesan
Published in Proceedings of the National Academy of Sciences - PNAS (24.02.2015)

by Shih, Patrick M., Wu, Dongying, Latifi, Amel, Axen, Seth D., Fewer, David P., Talla, Emmanuel, Calteau, Alexandra, Cai, Fei, de Marsac, Nicole Tandeau, Rippka, Rosmarie, Herdman, Michael, Sivonen, Kaarina, Coursin, Therese, Laurent, Thierry, Goodwin, Lynne, Nolan, Matt, Davenport, Karen W., Han, Cliff S., Rubin, Edward M., Eisen, Jonathan A., Woyke, Tanja, Gugger, Muriel, Kerfeld, Cheryl A.
Published in Proceedings of the National Academy of Sciences - PNAS (15.01.2013)

by Kembel, Steven W, Wu, Martin, Eisen, Jonathan A, Green, Jessica L
Published in PLoS computational biology (01.10.2012)

by Busby, Posy E, Soman, Chinmay, Wagner, Maggie R, Friesen, Maren L, Kremer, James, Bennett, Alison, Morsy, Mustafa, Eisen, Jonathan A, Leach, Jan E, Dangl, Jeffery L
Published in PLoS biology (28.03.2017)

by Wu, Dongying, Jospin, Guillaume, Eisen, Jonathan A
Published in PloS one (17.10.2013)

by Tritt, Andrew, Eisen, Jonathan A, Facciotti, Marc T, Darling, Aaron E
Published in PloS one (13.09.2012)

by Rosado, Phillipe M, Leite, Deborah C A, Duarte, Gustavo A S, Chaloub, Ricardo M, Jospin, Guillaume, Nunes da Rocha, Ulisses, P Saraiva, João, Dini-Andreote, Francisco, Eisen, Jonathan A, Bourne, David G, Peixoto, Raquel S
Published in The ISME Journal (01.04.2019)

by Valdés, Jorge, Pedroso, Inti, Quatrini, Raquel, Dodson, Robert J, Tettelin, Herve, Blake, 2nd, Robert, Eisen, Jonathan A, Holmes, David S
Published in BMC genomics (11.12.2008)

by Ettinger, Cassandra L, Eisen, Jonathan A
Published in PloS one (22.07.2020)

by Lang, Jenna Morgan, Darling, Aaron E, Eisen, Jonathan A
Published in PloS one (25.04.2013)

by Dietz, Leslie, Horve, Patrick F, Coil, David A, Fretz, Mark, Eisen, Jonathan A, Van Den Wymelenberg, Kevin
Published in mSystems (07.04.2020)

by Jerzak, K J, Mancuso, T, Eisen, A
Published in Current oncology (Toronto) (01.04.2018)

by Wilkins, Laetitia G E, Leray, Matthieu, O'Dea, Aaron, Yuen, Benedict, Peixoto, Raquel S, Pereira, Tiago J, Bik, Holly M, Coil, David A, Duffy, J Emmett, Herre, Edward Allen, Lessios, Harilaos A, Lucey, Noelle M, Mejia, Luis C, Rasher, Douglas B, Sharp, Koty H, Sogin, Emilia M, Thacker, Robert W, Vega Thurber, Rebecca, Wcislo, William T, Wilbanks, Elizabeth G, Eisen, Jonathan A
Published in PLoS biology (11.11.2019)

by Martiny, Jennifer B. H., Eisen, Jonathan A., Penn, Kevin, Allison, Steven D., Horner-Devine, M. Claire, DeLong, Edward F.
Published in Proceedings of the National Academy of Sciences - PNAS (10.05.2011)

by Woyke, Tanja, Xie, Gary, Copeland, Alex, González, José M, Han, Cliff, Kiss, Hajnalka, Saw, Jimmy H, Senin, Pavel, Yang, Chi, Chatterji, Sourav, Cheng, Jan-Fang, Eisen, Jonathan A, Sieracki, Michael E, Stepanauskas, Ramunas
Published in PloS one (23.04.2009)

by Rinke, Christian, Schwientek, Patrick, Sczyrba, Alexander, Ivanova, Natalia N, Anderson, Iain J, Cheng, Jan-Fang, Darling, Aaron, Malfatti, Stephanie, Swan, Brandon K, Gies, Esther A, Dodsworth, Jeremy A, Hedlund, Brian P, Tsiamis, George, Sievert, Stefan M, Liu, Wen-Tso, Eisen, Jonathan A, Hallam, Steven J, Kyrpides, Nikos C, Stepanauskas, Ramunas, Rubin, Edward M, Hugenholtz, Philip, Woyke, Tanja
Published in Nature (London) (25.07.2013)

by Castelle, Cindy J, Hug, Laura A, Wrighton, Kelly C, Thomas, Brian C, Williams, Kenneth H, Wu, Dongying, Tringe, Susannah G, Singer, Steven W, Eisen, Jonathan A, Banfield, Jillian F
Published in Nature communications (27.08.2013)