Activation and alliance of regulatory pathways in C. albicans during mammalian infection
Xu, Wenjie, Solis, Norma V, Ehrlich, Rachel L, Woolford, Carol A, Filler, Scott G, Mitchell, Aaron P
Published in PLoS biology (01.02.2015)
Published in PLoS biology (01.02.2015)
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Journal Article
Determining Aspergillus fumigatus transcription factor expression and function during invasion of the mammalian lung
Liu, Hong, Xu, Wenjie, Bruno, Vincent M, Phan, Quynh T, Solis, Norma V, Woolford, Carol A, Ehrlich, Rachel L, Shetty, Amol C, McCraken, Carrie, Lin, Jianfeng, Bromley, Michael J, Mitchell, Aaron P, Filler, Scott G
Published in PLoS pathogens (01.03.2021)
Published in PLoS pathogens (01.03.2021)
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Journal Article
Species-level bacterial community profiling of the healthy sinonasal microbiome using Pacific Biosciences sequencing of full-length 16S rRNA genes
Earl, Joshua P, Adappa, Nithin D, Krol, Jaroslaw, Bhat, Archana S, Balashov, Sergey, Ehrlich, Rachel L, Palmer, James N, Workman, Alan D, Blasetti, Mariel, Sen, Bhaswati, Hammond, Jocelyn, Cohen, Noam A, Ehrlich, Garth D, Mell, Joshua Chang
Published in Microbiome (23.10.2018)
Published in Microbiome (23.10.2018)
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Journal Article
A long-read sequencing strategy with overlapping linkers on adjacent fragments (OLAF-Seq) for targeted resequencing and enrichment
Uppuluri, Lahari, Shi, Christina Huan, Varapula, Dharma, Young, Eleanor, Ehrlich, Rachel L, Wang, Yilin, Piazza, Danielle, Mell, Joshua Chang, Yip, Kevin Y, Xiao, Ming
Published in Scientific reports (07.03.2024)
Published in Scientific reports (07.03.2024)
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Journal Article
Genome rearrangements induce biofilm formation in Escherichia coli C - an old model organism with a new application in biofilm research
Król, Jarosław E, Hall, Jr, Donald C, Balashov, Sergey, Pastor, Steven, Sibert, Justin, McCaffrey, Jennifer, Lang, Steven, Ehrlich, Rachel L, Earl, Joshua, Mell, Joshua C, Xiao, Ming, Ehrlich, Garth D
Published in BMC genomics (22.10.2019)
Published in BMC genomics (22.10.2019)
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Journal Article
A competence-regulated toxin-antitoxin system in Haemophilus influenzae
Findlay Black, Hailey, Mastromatteo, Scott, Sinha, Sunita, Ehrlich, Rachel L, Nislow, Corey, Chang Mell, Joshua, Redfield, Rosemary J
Published in PloS one (01.01.2020)
Published in PloS one (01.01.2020)
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Journal Article
Local Adaptation and the Evolution of Genome Architecture in Threespine Stickleback
Li, Qiushi, Lindtke, Dorothea, Rodríguez-Ramírez, Carlos, Kakioka, Ryo, Takahashi, Hiroshi, Toyoda, Atsushi, Kitano, Jun, Ehrlich, Rachel L., Chang Mell, Joshua, Yeaman, Sam
Published in Genome biology and evolution (20.05.2022)
Published in Genome biology and evolution (20.05.2022)
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Journal Article
Transition of Serotype 35B Pneumococci From Commensal to Prevalent Virulent Strain in Children
Fuji, Naoko, Pichichero, Michael, Ehrlich, Rachel L., Mell, Joshua Chang, Ehrlich, Garth D., Kaur, Ravinder
Published in Frontiers in cellular and infection microbiology (26.10.2021)
Published in Frontiers in cellular and infection microbiology (26.10.2021)
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Journal Article
Antagonistic Pleiotropy in the Bifunctional Surface Protein FadL (OmpP1) during Adaptation of Haemophilus influenzae to Chronic Lung Infection Associated with Chronic Obstructive Pulmonary Disease
Moleres, Javier, Fernández-Calvet, Ariadna, Ehrlich, Rachel L, Martí, Sara, Pérez-Regidor, Lucía, Euba, Begoña, Rodríguez-Arce, Irene, Balashov, Sergey, Cuevas, Ester, Liñares, Josefina, Ardanuy, Carmen, Martín-Santamaría, Sonsoles, Ehrlich, Garth D, Mell, Joshua Chang, Garmendia, Junkal
Published in mBio (25.09.2018)
Published in mBio (25.09.2018)
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Journal Article
Genetic Adaptation and Acquisition of Macrolide Resistance in Haemophilus spp. during Persistent Respiratory Tract Colonization in Chronic Obstructive Pulmonary Disease (COPD) Patients Receiving Long-Term Azithromycin Treatment
Carrera-Salinas, Anna, González-Díaz, Aida, Ehrlich, Rachel L, Berbel, Dàmaris, Tubau, Fe, Pomares, Xavier, Garmendia, Junkal, Domínguez, M Ángeles, Ardanuy, Carmen, Huertas, Daniel, Marín, Alicia, Montón, Conchita, Mell, Joshua Chang, Santos, Salud, Marti, Sara
Published in Microbiology spectrum (14.02.2023)
Published in Microbiology spectrum (14.02.2023)
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Journal Article
Whole genome sequencing of Streptomyces actuosus ISP-5337, Streptomyces sioyaensis B-5408, and Actinospica acidiphila B-2296 reveals secondary metabolomes with antibiotic potential
Majer, Haley M., Ehrlich, Rachel L., Ahmed, Azad, Earl, Joshua P., Ehrlich, Garth D., Beld, Joris
Published in Biotechnology reports (Amsterdam, Netherlands) (01.03.2021)
Published in Biotechnology reports (Amsterdam, Netherlands) (01.03.2021)
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Journal Article
Phenotypic diversity and genotypic flexibility of Burkholderia cenocepacia during long-term chronic infection of cystic fibrosis lungs
Lee, Amy Huei-Yi, Flibotte, Stephane, Sinha, Sunita, Paiero, Adrianna, Ehrlich, Rachel L, Balashov, Sergey, Ehrlich, Garth D, Zlosnik, James E A, Mell, Joshua Chang, Nislow, Corey
Published in Genome research (01.04.2017)
Published in Genome research (01.04.2017)
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Journal Article
Complete Genome Sequence of Aggregatibacter actinomycetemcomitans Strain IDH781
May, Anthony C, Ehrlich, Rachel L, Balashov, Sergey, Ehrlich, Garth D, Shanmugam, Mayilvahanan, Fine, Daniel H, Ramasubbu, Narayanan, Mell, Joshua Chang, Cugini, Carla
Published in Genome announcements (Washington, DC) (10.11.2016)
Published in Genome announcements (Washington, DC) (10.11.2016)
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Journal Article
Activation and Alliance of Regulatory Pathways in C. albicans during Mammalian Infection: e1002076
Xu, Wenjie, Solis, Norma V, Ehrlich, Rachel L, Woolford, Carol A, Filler, Scott G, Mitchell, Aaron P
Published in PLoS biology (01.02.2015)
Published in PLoS biology (01.02.2015)
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Journal Article
Species-level bacterial community profiling of the healthy sinonasal microbiome using Pacific Biosciences sequencing of full-length 16S rRNA genes
Earl, Joshua P, Adappa, Nithin D, Krol, Jaroslaw, Bhat, Archana S, Balashov, Sergey, Ehrlich, Rachel L, Palmer, James N, Workman, Alan D, Blasetti, Mariel, Sen, Bhaswati, Hammond, Jocelyn, Cohen, Noam A, Ehrlich, Garth D, Mell, Joshua C
Published in bioRxiv (30.08.2018)
Published in bioRxiv (30.08.2018)
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