Deep learning detects acute myeloid leukemia and predicts NPM1 mutation status from bone marrow smears
Eckardt, Jan-Niklas, Middeke, Jan Moritz, Riechert, Sebastian, Schmittmann, Tim, Sulaiman, Anas Shekh, Kramer, Michael, Sockel, Katja, Kroschinsky, Frank, Schuler, Ulrich, Schetelig, Johannes, Röllig, Christoph, Thiede, Christian, Wendt, Karsten, Bornhäuser, Martin
Published in Leukemia (01.01.2022)
Published in Leukemia (01.01.2022)
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Journal Article
Reinforcement Learning for Precision Oncology
Eckardt, Jan-Niklas, Wendt, Karsten, Bornhäuser, Martin, Middeke, Jan Moritz
Published in Cancers (15.09.2021)
Published in Cancers (15.09.2021)
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Journal Article
Semi-supervised learning in cancer diagnostics
Eckardt, Jan-Niklas, Bornhäuser, Martin, Wendt, Karsten, Middeke, Jan Moritz
Published in Frontiers in oncology (14.07.2022)
Published in Frontiers in oncology (14.07.2022)
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Journal Article
Deep learning identifies Acute Promyelocytic Leukemia in bone marrow smears
Eckardt, Jan-Niklas, Schmittmann, Tim, Riechert, Sebastian, Kramer, Michael, Sulaiman, Anas Shekh, Sockel, Katja, Kroschinsky, Frank, Schetelig, Johannes, Wagenführ, Lisa, Schuler, Ulrich, Platzbecker, Uwe, Thiede, Christian, Stölzel, Friedrich, Röllig, Christoph, Bornhäuser, Martin, Wendt, Karsten, Middeke, Jan Moritz
Published in BMC cancer (22.02.2022)
Published in BMC cancer (22.02.2022)
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Journal Article
Large language models and multimodal foundation models for precision oncology
Truhn, Daniel, Eckardt, Jan-Niklas, Ferber, Dyke, Kather, Jakob Nikolas
Published in NPJ precision oncology (22.03.2024)
Published in NPJ precision oncology (22.03.2024)
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Journal Article
Mimicking clinical trials with synthetic acute myeloid leukemia patients using generative artificial intelligence
Eckardt, Jan-Niklas, Hahn, Waldemar, Röllig, Christoph, Stasik, Sebastian, Platzbecker, Uwe, Müller-Tidow, Carsten, Serve, Hubert, Baldus, Claudia D, Schliemann, Christoph, Schäfer-Eckart, Kerstin, Hanoun, Maher, Kaufmann, Martin, Burchert, Andreas, Thiede, Christian, Schetelig, Johannes, Sedlmayr, Martin, Bornhäuser, Martin, Wolfien, Markus, Middeke, Jan Moritz
Published in NPJ digital medicine (20.03.2024)
Published in NPJ digital medicine (20.03.2024)
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Journal Article
The future landscape of large language models in medicine
Clusmann, Jan, Kolbinger, Fiona R, Muti, Hannah Sophie, Carrero, Zunamys I, Eckardt, Jan-Niklas, Laleh, Narmin Ghaffari, Löffler, Chiara Maria Lavinia, Schwarzkopf, Sophie-Caroline, Unger, Michaela, Veldhuizen, Gregory P, Wagner, Sophia J, Kather, Jakob Nikolas
Published in Communications medicine (10.10.2023)
Published in Communications medicine (10.10.2023)
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Journal Article
An overview and a roadmap for artificial intelligence in hematology and oncology
Rösler, Wiebke, Altenbuchinger, Michael, Baeßler, Bettina, Beissbarth, Tim, Beutel, Gernot, Bock, Robert, von Bubnoff, Nikolas, Eckardt, Jan-Niklas, Foersch, Sebastian, Loeffler, Chiara M. L., Middeke, Jan Moritz, Mueller, Martha-Lena, Oellerich, Thomas, Risse, Benjamin, Scherag, André, Schliemann, Christoph, Scholz, Markus, Spang, Rainer, Thielscher, Christian, Tsoukakis, Ioannis, Kather, Jakob Nikolas
Published in Journal of cancer research and clinical oncology (01.08.2023)
Published in Journal of cancer research and clinical oncology (01.08.2023)
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Journal Article
The multimodality cell segmentation challenge: toward universal solutions
Ma, Jun, Xie, Ronald, Ayyadhury, Shamini, Ge, Cheng, Gupta, Anubha, Gupta, Ritu, Gu, Song, Zhang, Yao, Lee, Gihun, Kim, Joonkee, Lou, Wei, Li, Haofeng, Upschulte, Eric, Dickscheid, Timo, de Almeida, José Guilherme, Wang, Yixin, Han, Lin, Yang, Xin, Labagnara, Marco, Gligorovski, Vojislav, Scheder, Maxime, Rahi, Sahand Jamal, Kempster, Carly, Pollitt, Alice, Espinosa, Leon, Mignot, Tâm, Middeke, Jan Moritz, Eckardt, Jan-Niklas, Li, Wangkai, Li, Zhaoyang, Cai, Xiaochen, Bai, Bizhe, Greenwald, Noah F, Van Valen, David, Weisbart, Erin, Cimini, Beth A, Cheung, Trevor, Brück, Oscar, Bader, Gary D, Wang, Bo
Published in Nature methods (01.06.2024)
Published in Nature methods (01.06.2024)
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Journal Article
Secondary-type mutations do not impact outcome in NPM1-mutated acute myeloid leukemia - implications for the European LeukemiaNet risk classification
Eckardt, Jan-Niklas, Bill, Marius, Rausch, Christian, Metzeler, Klaus, Spiekermann, Karsten, Stasik, Sebastian, Sauer, Tim, Scholl, Sebastian, Hochhaus, Andreas, Crysandt, Martina, Brümmendorf, Tim H, Krug, Utz, Wörmann, Bernhard, Hiddemann, Wolfgang, Görlich, Dennis, Sauerland, Cristina, Steffen, Björn, Einsele, Hermann, Neubauer, Andreas, Burchert, Andreas, Schäfer-Eckart, Kerstin, Berdel, Wolfgang E, Schliemann, Christoph, Krause, Stefan W, Hänel, Mathias, Hanoun, Maher, Kaufmann, Martin, Fransecky, Lars, Braess, Jan, Ruhnke, Leo, Schetelig, Johannes, Middeke, Jan Moritz, Serve, Hubert, Baldus, Claudia D, Platzbecker, Uwe, Müller-Tidow, Carsten, Bornhäuser, Martin, Herold, Tobias, Thiede, Christian, Röllig, Christoph
Published in Leukemia (01.11.2023)
Published in Leukemia (01.11.2023)
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Journal Article
Mutated IKZF1 is an independent marker of adverse risk in acute myeloid leukemia
Eckardt, Jan-Niklas, Stasik, Sebastian, Röllig, Christoph, Petzold, Andreas, Sauer, Tim, Scholl, Sebastian, Hochhaus, Andreas, Crysandt, Martina, Brümmendorf, Tim H, Naumann, Ralph, Steffen, Björn, Kunzmann, Volker, Einsele, Hermann, Schaich, Markus, Burchert, Andreas, Neubauer, Andreas, Schäfer-Eckart, Kerstin, Schliemann, Christoph, Krause, Stefan W, Herbst, Regina, Hänel, Mathias, Hanoun, Maher, Kaiser, Ulrich, Kaufmann, Martin, Rácil, Zdenek, Mayer, Jiri, Oelschlägel, Uta, Berdel, Wolfgang E, Ehninger, Gerhard, Serve, Hubert, Müller-Tidow, Carsten, Platzbecker, Uwe, Baldus, Claudia D, Dahl, Andreas, Schetelig, Johannes, Bornhäuser, Martin, Middeke, Jan Moritz, Thiede, Christian
Published in Leukemia (01.12.2023)
Published in Leukemia (01.12.2023)
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Journal Article
Prediction of complete remission and survival in acute myeloid leukemia using supervised machine learning
Eckardt, Jan-Niklas, Röllig, Christoph, Metzeler, Klaus, Kramer, Michael, Stasik, Sebastian, Georgi, Julia-Annabell, Heisig, Peter, Spiekermann, Karsten, Krug, Utz, Braess, Jan, Görlich, Dennis, Sauerland, Cristina M, Woermann, Bernhard, Herold, Tobias, Berdel, Wolfgang E, Hiddemann, Wolfgang, Kroschinsky, Frank, Schetelig, Johannes, Platzbecker, Uwe, Müller-Tidow, Carsten, Sauer, Tim, Serve, Hubert, Baldus, Claudia, Schäfer-Eckart, Kerstin, Kaufmann, Martin, Krause, Stefan, Hänel, Mathias, Schliemann, Christoph, Hanoun, Maher, Thiede, Christian, Bornhäuser, Martin, Wendt, Karsten, Middeke, Jan Moritz
Published in Haematologica (Roma) (01.03.2023)
Published in Haematologica (Roma) (01.03.2023)
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Journal Article
How to customize common data models for rare diseases: an OMOP-based implementation and lessons learned
Ahmadi, Najia, Zoch, Michele, Guengoeze, Oya, Facchinello, Carlo, Mondorf, Antonia, Stratmann, Katharina, Musleh, Khader, Erasmus, Hans-Peter, Tchertov, Jana, Gebler, Richard, Schaaf, Jannik, Frischen, Lena S, Nasirian, Azadeh, Dai, Jiabin, Henke, Elisa, Tremblay, Douglas, Srisuwananukorn, Andrew, Bornhäuser, Martin, Röllig, Christoph, Eckardt, Jan-Niklas, Middeke, Jan Moritz, Wolfien, Markus, Sedlmayr, Martin
Published in Orphanet journal of rare diseases (14.08.2024)
Published in Orphanet journal of rare diseases (14.08.2024)
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Journal Article
Alterations of cohesin complex genes in acute myeloid leukemia: differential co-mutations, clinical presentation and impact on outcome
Eckardt, Jan-Niklas, Stasik, Sebastian, Röllig, Christoph, Sauer, Tim, Scholl, Sebastian, Hochhaus, Andreas, Crysandt, Martina, Brümmendorf, Tim H, Naumann, Ralph, Steffen, Björn, Kunzmann, Volker, Einsele, Hermann, Schaich, Markus, Burchert, Andreas, Neubauer, Andreas, Schäfer-Eckart, Kerstin, Schliemann, Christoph, Krause, Stefan W, Herbst, Regina, Hänel, Mathias, Hanoun, Maher, Kaiser, Ulrich, Kaufmann, Martin, Rácil, Zdenek, Mayer, Jiri, Cerqueira, Tiago, Kroschinsky, Frank, Berdel, Wolfgang E, Serve, Hubert, Müller-Tidow, Carsten, Platzbecker, Uwe, Baldus, Claudia D, Schetelig, Johannes, Siepmann, Timo, Bornhäuser, Martin, Middeke, Jan Moritz, Thiede, Christian
Published in Blood cancer journal (New York) (24.01.2023)
Published in Blood cancer journal (New York) (24.01.2023)
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Journal Article
UBTF tandem duplications are rare but recurrent alterations in adult AML and associated with younger age, myelodysplasia, and inferior outcome
Georgi, Julia-Annabell, Stasik, Sebastian, Eckardt, Jan-Niklas, Zukunft, Sven, Hartwig, Marita, Röllig, Christoph, Middeke, Jan Moritz, Oelschlägel, Uta, Krug, Utz, Sauer, Tim, Scholl, Sebastian, Hochhaus, Andreas, Brümmendorf, Tim H, Naumann, Ralph, Steffen, Björn, Einsele, Hermann, Schaich, Markus, Burchert, Andreas, Neubauer, Andreas, Schäfer-Eckart, Kerstin, Schliemann, Christoph, Krause, Stefan W, Hänel, Mathias, Noppeney, Richard, Kaiser, Ulrich, Baldus, Claudia D, Kaufmann, Martin, Müller-Tidow, Carsten, Platzbecker, Uwe, Berdel, Wolfgang E, Serve, Hubert, Ehninger, Gerhard, Bornhäuser, Martin, Schetelig, Johannes, Kroschinsky, Frank, Thiede, Christian
Published in Blood cancer journal (New York) (26.05.2023)
Published in Blood cancer journal (New York) (26.05.2023)
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Journal Article
Loss-of-Function Mutations of BCOR Are an Independent Marker of Adverse Outcomes in Intensively Treated Patients with Acute Myeloid Leukemia
Eckardt, Jan-Niklas, Stasik, Sebastian, Kramer, Michael, Röllig, Christoph, Krämer, Alwin, Scholl, Sebastian, Hochhaus, Andreas, Crysandt, Martina, Brümmendorf, Tim H, Naumann, Ralph, Steffen, Björn, Kunzmann, Volker, Einsele, Hermann, Schaich, Markus, Burchert, Andreas, Neubauer, Andreas, Schäfer-Eckart, Kerstin, Schliemann, Christoph, Krause, Stefan W, Herbst, Regina, Hänel, Mathias, Frickhofen, Norbert, Noppeney, Richard, Kaiser, Ulrich, Baldus, Claudia D, Kaufmann, Martin, Rácil, Zdenek, Platzbecker, Uwe, Berdel, Wolfgang E, Mayer, Jiří, Serve, Hubert, Müller-Tidow, Carsten, Ehninger, Gerhard, Stölzel, Friedrich, Kroschinsky, Frank, Schetelig, Johannes, Bornhäuser, Martin, Thiede, Christian, Middeke, Jan Moritz
Published in Cancers (26.04.2021)
Published in Cancers (26.04.2021)
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Journal Article
Unsupervised meta-clustering identifies risk clusters in acute myeloid leukemia based on clinical and genetic profiles
Eckardt, Jan-Niklas, Röllig, Christoph, Metzeler, Klaus, Heisig, Peter, Stasik, Sebastian, Georgi, Julia-Annabell, Kroschinsky, Frank, Stölzel, Friedrich, Platzbecker, Uwe, Spiekermann, Karsten, Krug, Utz, Braess, Jan, Görlich, Dennis, Sauerland, Cristina, Woermann, Bernhard, Herold, Tobias, Hiddemann, Wolfgang, Müller-Tidow, Carsten, Serve, Hubert, Baldus, Claudia D, Schäfer-Eckart, Kerstin, Kaufmann, Martin, Krause, Stefan W, Hänel, Mathias, Berdel, Wolfgang E, Schliemann, Christoph, Mayer, Jiri, Hanoun, Maher, Schetelig, Johannes, Wendt, Karsten, Bornhäuser, Martin, Thiede, Christian, Middeke, Jan Moritz
Published in Communications medicine (17.05.2023)
Published in Communications medicine (17.05.2023)
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Journal Article
The Multi-modality Cell Segmentation Challenge: Towards Universal Solutions
Ma, Jun, Xie, Ronald, Ayyadhury, Shamini, Cheng, Ge, Gupta, Anubha, Gupta, Ritu, Gu, Song, Zhang, Yao, Lee, Gihun, Kim, Joonkee, Wei, Lou, Li, Haofeng, Upschulte, Eric, Dickscheid, Timo, Guilherme de Almeida, José, Wang, Yixin, Lin, Han, Yang, Xin, Labagnara, Marco, Gligorovski, Vojislav, Scheder, Maxime, Rahi, Sahand Jamal, Kempster, Carly, Pollitt, Alice, Espinosa, Leon, Mignot, Tâm, Jan Moritz Middeke, Jan-Niklas Eckardt, Li, Wangkai, Li, Zhaoyang, Cai, Xiaochen, Bai, Bizhe, Greenwald, Noah F, David Van Valen, Weisbart, Erin, Cimini, Beth A, Cheung, Trevor, Brück, Oscar, Bader, Gary D, Wang, Bo
Published in arXiv.org (01.04.2024)
Published in arXiv.org (01.04.2024)
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Journal Article
Mimicking Clinical Trials with Synthetic Acute Myeloid Leukemia Patients Using Generative Artificial Intelligence
Eckardt, Jan-Niklas, Hahn, Waldemar, Röllig, Christoph, Stasik, Sebastian, Platzbecker, Uwe, Müller-Tidow, Carsten, Serve, Hubert, Baldus, Claudia D, Schliemann, Christoph, Schäfer-Eckart, Kerstin, Hanoun, Maher, Kaufmann, Martin, Burchert, Andreas, Thiede, Christian, Schetelig, Johannes, Bornhäuser, Martin, Wolfien, Markus, Middeke, Jan Moritz
Published in Blood (02.11.2023)
Published in Blood (02.11.2023)
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Journal Article