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Schultz, Darrin T., Haddock, Steven H. D., Bredeson, Jessen V., Green, Richard E., Simakov, Oleg, Rokhsar, Daniel S.
Published in Nature (London) (01.06.2023)
Published in Nature (London) (01.06.2023)
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Chromosome-scale shotgun assembly using an in vitro method for long-range linkage
Putnam, Nicholas H, O'Connell, Brendan L, Stites, Jonathan C, Rice, Brandon J, Blanchette, Marco, Calef, Robert, Troll, Christopher J, Fields, Andrew, Hartley, Paul D, Sugnet, Charles W, Haussler, David, Rokhsar, Daniel S, Green, Richard E
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Published in Genome research (01.03.2016)
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Minimizing polymerase biases in metabarcoding
Nichols, Ruth V., Vollmers, Christopher, Newsom, Lee A., Wang, Yue, Heintzman, Peter D., Leighton, McKenna, Green, Richard E., Shapiro, Beth
Published in Molecular ecology resources (01.09.2018)
Published in Molecular ecology resources (01.09.2018)
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Epigenetic maintenance of topological domains in the highly rearranged gibbon genome
Lazar, Nathan H, Nevonen, Kimberly A, O'Connell, Brendan, McCann, Christine, O'Neill, Rachel J, Green, Richard E, Meyer, Thomas J, Okhovat, Mariam, Carbone, Lucia
Published in Genome research (01.07.2018)
Published in Genome research (01.07.2018)
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Deeply conserved synteny resolves early events in vertebrate evolution
Simakov, Oleg, Marlétaz, Ferdinand, Yue, Jia-Xing, O’Connell, Brendan, Jenkins, Jerry, Brandt, Alexander, Calef, Robert, Tung, Che-Huang, Huang, Tzu-Kai, Schmutz, Jeremy, Satoh, Nori, Yu, Jr-Kai, Putnam, Nicholas H., Green, Richard E., Rokhsar, Daniel S.
Published in Nature ecology & evolution (01.06.2020)
Published in Nature ecology & evolution (01.06.2020)
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A ligation-based single-stranded library preparation method to analyze cell-free DNA and synthetic oligos
Troll, Christopher J, Kapp, Joshua, Rao, Varsha, Harkins, Kelly M, Cole, Charles, Naughton, Colin, Morgan, Jessica M, Shapiro, Beth, Green, Richard E
Published in BMC genomics (27.12.2019)
Published in BMC genomics (27.12.2019)
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Genomic analysis of 6,000-year-old cultivated grain illuminates the domestication history of barley
Mascher, Martin, Schuenemann, Verena J, Davidovich, Uri, Marom, Nimrod, Himmelbach, Axel, Hübner, Sariel, Korol, Abraham, David, Michal, Reiter, Ella, Riehl, Simone, Schreiber, Mona, Vohr, Samuel H, Green, Richard E, Dawson, Ian K, Russell, Joanne, Kilian, Benjamin, Muehlbauer, Gary J, Waugh, Robbie, Fahima, Tzion, Krause, Johannes, Weiss, Ehud, Stein, Nils
Published in Nature genetics (01.09.2016)
Published in Nature genetics (01.09.2016)
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Genomic evidence for island population conversion resolves conflicting theories of polar bear evolution
Cahill, James A, Green, Richard E, Fulton, Tara L, Stiller, Mathias, Jay, Flora, Ovsyanikov, Nikita, Salamzade, Rauf, St John, John, Stirling, Ian, Slatkin, Montgomery, Shapiro, Beth
Published in PLoS genetics (01.03.2013)
Published in PLoS genetics (01.03.2013)
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Patterns of Damage in Genomic DNA Sequences from a Neandertal
Briggs, Adrian W., Stenzel, Udo, Johnson, Philip L. F., Green, Richard E., Kelso, Janet, Prüfer, Kay, Meyer, Matthias, Krause, Johannes, Ronan, Michael T., Lachmann, Michael, Pääbo, Svante
Published in Proceedings of the National Academy of Sciences - PNAS (11.09.2007)
Published in Proceedings of the National Academy of Sciences - PNAS (11.09.2007)
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One fly–one genome: chromosome-scale genome assembly of a single outbred Drosophila melanogaster
Adams, Matthew, McBroome, Jakob, Maurer, Nicholas, Pepper-Tunick, Evan, Saremi, Nedda F, Green, Richard E, Vollmers, Christopher, Corbett-Detig, Russell B
Published in Nucleic acids research (27.07.2020)
Published in Nucleic acids research (27.07.2020)
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Targeted Retrieval and Analysis of Five Neandertal mtDNA Genomes
Briggs, Adrian W, Good, Jeffrey M, Green, Richard E, Krause, Johannes, Maricic, Tomislav, Stenzel, Udo, Lalueza-Fox, Carles, Rudan, Pavao, Brajković, Dejana, Kućan, Željko, Gušić, Ivan, Schmitz, Ralf, Doronichev, Vladimir B, Golovanova, Liubov V, de la Rasilla, Marco, Fortea, Javier, Rosas, Antonio, Pääbo, Svante
Published in Science (American Association for the Advancement of Science) (17.07.2009)
Published in Science (American Association for the Advancement of Science) (17.07.2009)
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Deeply conserved synteny and the evolution of metazoan chromosomes
Simakov, Oleg, Bredeson, Jessen, Berkoff, Kodiak, Marletaz, Ferdinand, Mitros, Therese, Schultz, Darrin T, O'Connell, Brendan L, Dear, Paul, Martinez, Daniel E, Steele, Robert E, Green, Richard E, David, Charles N, Rokhsar, Daniel S
Published in Science advances (02.02.2022)
Published in Science advances (02.02.2022)
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Transoceanic drift and the domestication of African bottle gourds in the Americas
Kistler, Logan, Montenegro, Álvaro, Smith, Bruce D., Gifford, John A., Green, Richard E., Newsom, Lee A., Shapiro, Beth
Published in Proceedings of the National Academy of Sciences - PNAS (25.02.2014)
Published in Proceedings of the National Academy of Sciences - PNAS (25.02.2014)
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Evolutionary history and adaptation of a human pygmy population of Flores Island, Indonesia
Tucci, Serena, Vohr, Samuel H, McCoy, Rajiv C, Vernot, Benjamin, Robinson, Matthew R, Barbieri, Chiara, Nelson, Brad J, Fu, Wenqing, Purnomo, Gludhug A, Sudoyo, Herawati, Eichler, Evan E, Barbujani, Guido, Visscher, Peter M, Akey, Joshua M, Green, Richard E
Published in Science (American Association for the Advancement of Science) (03.08.2018)
Published in Science (American Association for the Advancement of Science) (03.08.2018)
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Analysis of one million base pairs of Neanderthal DNA
Ronan, Michael T, Egholm, Michael, Paunovic, Maja, Pääbo, Svante, Green, Richard E, Ptak, Susan E, Rothberg, Jonathan M, Briggs, Adrian W, Simons, Jan F, Krause, Johannes, Du, Lei
Published in Nature (16.11.2006)
Published in Nature (16.11.2006)
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Stable C and N isotope analysis of hair suggest undernourishment as a factor in the death of a mummified girl from late 19th century San Francisco, CA
Eerkens, Jelmer W, Hull, Bryna, Goodman, Jena, Evoy, Angela, Kapp, Joshua D, Hussain, Sidra, Green, Richard E
Published in PloS one (18.09.2017)
Published in PloS one (18.09.2017)
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Modular automated microfluidic cell culture platform reduces glycolytic stress in cerebral cortex organoids
Seiler, Spencer T., Mantalas, Gary L., Selberg, John, Cordero, Sergio, Torres-Montoya, Sebastian, Baudin, Pierre V., Ly, Victoria T., Amend, Finn, Tran, Liam, Hoffman, Ryan N., Rolandi, Marco, Green, Richard E., Haussler, David, Salama, Sofie R., Teodorescu, Mircea
Published in Scientific reports (23.11.2022)
Published in Scientific reports (23.11.2022)
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Genomic DNA sequences from mastodon and woolly mammoth reveal deep speciation of forest and savanna elephants
Rohland, Nadin, Reich, David, Mallick, Swapan, Meyer, Matthias, Green, Richard E, Georgiadis, Nicholas J, Roca, Alfred L, Hofreiter, Michael
Published in PLoS biology (01.12.2010)
Published in PLoS biology (01.12.2010)
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