Simultaneous Reprogramming and Gene Correction of Patient Fibroblasts
Howden, Sara E., Maufort, John P., Duffin, Bret M., Elefanty, Andrew G., Stanley, Edouard G., Thomson, James A.
Published in Stem cell reports (08.12.2015)
Published in Stem cell reports (08.12.2015)
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Journal Article
Automated minute scale RNA-seq of pluripotent stem cell differentiation reveals early divergence of human and mouse gene expression kinetics
Barry, Christopher, Schmitz, Matthew T, Argus, Cara, Bolin, Jennifer M, Probasco, Mitchell D, Leng, Ning, Duffin, Bret M, Steill, John, Swanson, Scott, McIntosh, Brian E, Stewart, Ron, Kendziorski, Christina, Thomson, James A, Bacher, Rhonda
Published in PLoS computational biology (01.12.2019)
Published in PLoS computational biology (01.12.2019)
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Journal Article
Nonirradiated NOD,B6.SCID Il2rγ-/- Kit(W41/W41) (NBSGW) mice support multilineage engraftment of human hematopoietic cells
McIntosh, Brian E, Brown, Matthew E, Duffin, Bret M, Maufort, John P, Vereide, David T, Slukvin, Igor I, Thomson, James A
Published in Stem cell reports (10.02.2015)
Published in Stem cell reports (10.02.2015)
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Journal Article
Species-specific developmental timing is maintained by pluripotent stem cells ex utero
Barry, Christopher, Schmitz, Matthew T., Jiang, Peng, Schwartz, Michael P., Duffin, Bret M., Swanson, Scott, Bacher, Rhonda, Bolin, Jennifer M., Elwell, Angela L., McIntosh, Brian E., Stewart, Ron, Thomson, James A.
Published in Developmental biology (15.03.2017)
Published in Developmental biology (15.03.2017)
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Journal Article
Reproducibility across single-cell RNA-seq protocols for spatial ordering analysis
Seirup, Morten, Chu, Li-Fang, Sengupta, Srikumar, Leng, Ning, Browder, Hadley, Kapadia, Kevin, Shafer, Christina M, Duffin, Bret, Elwell, Angela L, Bolin, Jennifer M, Swanson, Scott, Stewart, Ron, Kendziorski, Christina, Thomson, James A, Bacher, Rhonda
Published in PloS one (28.09.2020)
Published in PloS one (28.09.2020)
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Journal Article
A Human Pluripotent Stem Cell-Based Screen for Smooth Muscle Cell Differentiation and Maturation Identifies Inhibitors of Intimal Hyperplasia
Zhang, Jue, McIntosh, Brian E., Wang, Bowen, Brown, Matthew E., Probasco, Mitchell D., Webster, Sarah, Duffin, Bret, Zhou, Ying, Guo, Lian-Wang, Burlingham, William J., Kent, Craig, Ferris, Michael, Thomson, James A.
Published in Stem cell reports (11.06.2019)
Published in Stem cell reports (11.06.2019)
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Journal Article
Co-culture with mouse embryonic fibroblasts improves maintenance of metabolic function of human small hepatocyte progenitor cells
Sengupta, Srikumar, Johnson, Brian, Seirup, Morten, Ardalani, Hamisha, Duffin, Bret, Barrett-Wilt, Gregory A., Stewart, Ron, Thomson, James A.
Published in Current research in toxicology (10.06.2020)
Published in Current research in toxicology (10.06.2020)
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Journal Article
Nonirradiated NOD,B6.SCID Il2rγ−/−KitW41/W41 (NBSGW) Mice Support Multilineage Engraftment of Human Hematopoietic Cells
McIntosh, Brian E., Brown, Matthew E., Duffin, Bret M., Maufort, John P., Vereide, David T., Slukvin, Igor I., Thomson, James A.
Published in Stem cell reports (01.02.2015)
Published in Stem cell reports (01.02.2015)
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Journal Article
EBSeq-HMM: a Bayesian approach for identifying gene-expression changes in ordered RNA-seq experiments
Leng, Ning, Li, Yuan, McIntosh, Brian E, Nguyen, Bao Kim, Duffin, Bret, Tian, Shulan, Thomson, James A, Dewey, Colin N, Stewart, Ron, Kendziorski, Christina
Published in Bioinformatics (15.08.2015)
Published in Bioinformatics (15.08.2015)
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Journal Article
Generation of anti-GD2 CAR macrophages from human pluripotent stem cells for cancer immunotherapies
Zhang, Jue, Webster, Sarah, Duffin, Bret, Bernstein, Matthew N., Steill, John, Swanson, Scott, Forsberg, Matthew H., Bolin, Jennifer, Brown, Matthew E., Majumder, Aditi, Capitini, Christian M., Stewart, Ron, Thomson, James A., Slukvin, Igor I.
Published in Stem cell reports (14.02.2023)
Published in Stem cell reports (14.02.2023)
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Journal Article
Rapid changes in chromatin structure during dedifferentiation of primary hepatocytes in vitro
Seirup, Morten, Sengupta, Srikumar, Swanson, Scott, McIntosh, Brian E., Collins, Mike, Chu, Li-Fang, Cheng, Zhang, Gorkin, David U., Duffin, Bret, Bolin, Jennifer M., Argus, Cara, Stewart, Ron, Thomson, James A.
Published in Genomics (San Diego, Calif.) (01.05.2022)
Published in Genomics (San Diego, Calif.) (01.05.2022)
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Journal Article
Efficient derivation of transgene-free porcine induced pluripotent stem cells enables in vitro modeling of species-specific developmental timing
Conrad, J. Vanessa, Meyer, Susanne, Ramesh, Pranav S., Neira, Jaime A., Rusteika, Margaret, Mamott, Daniel, Duffin, Bret, Bautista, Monica, Zhang, Jue, Hiles, Emily, Higgins, Eve M., Steill, John, Freeman, Jack, Ni, Zijian, Liu, Shiying, Ungrin, Mark, Rancourt, Derrick, Clegg, Dennis O., Stewart, Ron, Thomson, James A., Chu, Li-Fang
Published in Stem cell reports (12.12.2023)
Published in Stem cell reports (12.12.2023)
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Journal Article
Rapid changes in chromatin structure during dedifferentiation of primary hepatocytes in vitro
Seirup, Morten, Sengupta, Srikumar, Swanson, Scott, Mcintosh, Brian E, Colins, Mike, Li-Fang, Chu, Zhang, Cheng, Gorkin, David U, Duffin, Bret, Bolin, Jennifer M, Argus, Cara, Stewart, Ron, Thomson, James A
Published in bioRxiv (22.09.2020)
Published in bioRxiv (22.09.2020)
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Reproducibility across single-cell RNA-seq protocols for spatial ordering analysis
Seirup, Morten, Li-Fang, Chu, Sengupta, Srikumar, Leng, Ning, Browder, Hadley, Kapadia, Kevin, Shafer, Christina M, Duffin, Bret, Elwell, Angela L, Bolin, Jennifer M, Swanson, Scott, Stewart, Ron, Kendziorski, Christina, Thomson, James A, Bacher, Rhonda
Published in bioRxiv (10.06.2020)
Published in bioRxiv (10.06.2020)
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