Current status and topical issues on the use of eDNA-based targeted detection of rare animal species
Duarte, Sofia, Simões, Luara, Costa, Filipe O.
Published in The Science of the total environment (15.12.2023)
Published in The Science of the total environment (15.12.2023)
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Journal Article
DNA barcode reference libraries for the monitoring of aquatic biota in Europe: Gap-analysis and recommendations for future work
Weigand, Hannah, Beermann, Arne J., Čiampor, Fedor, Costa, Filipe O., Csabai, Zoltán, Duarte, Sofia, Geiger, Matthias F., Grabowski, Michał, Rimet, Frédéric, Rulik, Björn, Strand, Malin, Szucsich, Nikolaus, Weigand, Alexander M., Willassen, Endre, Wyler, Sofia A., Bouchez, Agnès, Borja, Angel, Čiamporová-Zaťovičová, Zuzana, Ferreira, Sónia, Dijkstra, Klaas-Douwe B., Eisendle, Ursula, Freyhof, Jörg, Gadawski, Piotr, Graf, Wolfram, Haegerbaeumer, Arne, van der Hoorn, Berry B., Japoshvili, Bella, Keresztes, Lujza, Keskin, Emre, Leese, Florian, Macher, Jan N., Mamos, Tomasz, Paz, Guy, Pešić, Vladimir, Pfannkuchen, Daniela Maric, Pfannkuchen, Martin Andreas, Price, Benjamin W., Rinkevich, Buki, Teixeira, Marcos A.L., Várbíró, Gábor, Ekrem, Torbjørn
Published in The Science of the total environment (15.08.2019)
Published in The Science of the total environment (15.08.2019)
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Journal Article
Environmental DNA metabarcoding for benthic monitoring: A review of sediment sampling and DNA extraction methods
Pawlowski, J., Bruce, K., Panksep, K., Aguirre, F.I., Amalfitano, S., Apothéloz-Perret-Gentil, L., Baussant, T., Bouchez, A., Carugati, L., Cermakova, K., Cordier, T., Corinaldesi, C., Costa, F.O., Danovaro, R., Dell'Anno, A., Duarte, S., Eisendle, U., Ferrari, B.J.D., Frontalini, F., Frühe, L., Haegerbaeumer, A., Kisand, V., Krolicka, A., Lanzén, A., Leese, F., Lejzerowicz, F., Lyautey, E., Maček, I., Sagova-Marečková, M., Pearman, J.K., Pochon, X., Stoeck, T., Vivien, R., Weigand, A., Fazi, S.
Published in The Science of the total environment (20.04.2022)
Published in The Science of the total environment (20.04.2022)
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Journal Article
Macrozoobenthos monitoring in Portuguese transitional waters in the scope of the water framework directive using morphology and DNA metabarcoding
Duarte, Sofia, Vieira, Pedro E., Leite, Barbara R., Teixeira, Marcos A.L., Neto, João M., Costa, Filipe O.
Published in Estuarine, coastal and shelf science (05.02.2023)
Published in Estuarine, coastal and shelf science (05.02.2023)
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Journal Article
Small-scale spatial variation of meiofaunal communities in Lima estuary (NW Portugal) assessed through metabarcoding
Fais, Maria, Duarte, Sofia, Vieira, Pedro Emanuel, Sousa, Ronaldo, Hajibabaei, Mehrdad, Canchaya, Carlos Alberto, Costa, Filipe Oliveira
Published in Estuarine, coastal and shelf science (05.06.2020)
Published in Estuarine, coastal and shelf science (05.06.2020)
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Journal Article
Hurdles and opportunities in implementing marine biosecurity systems in data-poor regions
Carvalho, Susana, Shchepanik, Hailey, Aylagas, Eva, Berumen, Michael L, Costa, Filipe O, Costello, Mark John, Duarte, Sofia, Ferrario, Jasmine, Floerl, Oliver, Heinle, Moritz, Katsanevakis, Stelios, Marchini, Agnese, Olenin, Sergej, Pearman, John K, Peixoto, Raquel S, Rabaoui, Lotfi J, Ruiz, Greg, Srėbalienė, Greta, Therriault, Thomas W, Vieira, Pedro E, Zaiko, Anastasija
Published in Bioscience (01.07.2023)
Published in Bioscience (01.07.2023)
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Journal Article
Status and prospects of marine NIS detection and monitoring through (e)DNA metabarcoding
Duarte, Sofia, Vieira, Pedro E., Lavrador, Ana S., Costa, Filipe O.
Published in The Science of the total environment (10.01.2021)
Published in The Science of the total environment (10.01.2021)
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Journal Article
Biogeography of aquatic hyphomycetes: Current knowledge and future perspectives
Duarte, Sofia, Bärlocher, Felix, Pascoal, Cláudia, Cássio, Fernanda
Published in Fungal ecology (01.02.2016)
Published in Fungal ecology (01.02.2016)
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Journal Article
Taxa-area relationship of aquatic fungi on deciduous leaves
Duarte, Sofia, Cássio, Fernanda, Pascoal, Cláudia, Bärlocher, Felix
Published in PloS one (18.07.2017)
Published in PloS one (18.07.2017)
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Journal Article
Gaps in DNA sequence libraries for Macaronesian marine macroinvertebrates imply decades till completion and robust monitoring
Vieira, Pedro E., Lavrador, Ana S., Parente, Manuela I., Parretti, Paola, Costa, Ana C., Costa, Filipe O., Duarte, Sofia
Published in Diversity & distributions (01.10.2021)
Published in Diversity & distributions (01.10.2021)
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Journal Article
Differences in the sensitivity of fungi and bacteria to season and invertebrates affect leaf litter decomposition in a Mediterranean stream
Mora-Gómez, Juanita, Elosegi, Arturo, Duarte, Sofia, Cássio, Fernanda, Pascoal, Cláudia, Romaní, Anna M.
Published in FEMS microbiology ecology (01.08.2016)
Published in FEMS microbiology ecology (01.08.2016)
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Journal Article
Integration of DNA-Based Approaches in Aquatic Ecological Assessment Using Benthic Macroinvertebrates
Duarte, Sofia, Leite, Barbara, Feio, Maria, Costa, Filipe, Filipe, Ana
Published in Water (Basel) (01.02.2021)
Published in Water (Basel) (01.02.2021)
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Journal Article
Compilation, revision, and annotation of DNA barcodes of marine invertebrate Non-Indigenous Species (NIS) occurring in european coastal regions
Lavrador, Ana Sofia Castro, Fontes, João T., Vieira, Pedro Emanuel Ferreira Reis, Costa, Filipe O., Duarte, Sofia Alexandra Ferreira
Published in Diversity (Basel) (2023)
Published in Diversity (Basel) (2023)
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Journal Article