Orthograph: a versatile tool for mapping coding nucleotide sequences to clusters of orthologous genes
Petersen, Malte, Meusemann, Karen, Donath, Alexander, Dowling, Daniel, Liu, Shanlin, Peters, Ralph S, Podsiadlowski, Lars, Vasilikopoulos, Alexandros, Zhou, Xin, Misof, Bernhard, Niehuis, Oliver
Published in BMC bioinformatics (16.02.2017)
Published in BMC bioinformatics (16.02.2017)
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Journal Article
Structural elements of an NRPS cyclization domain and its intermodule docking domain
Dowling, Daniel P., Kung, Yan, Croft, Anna K., Taghizadeh, Koli, Kelly, Wendy L., Walsh, Christopher T., Drennan, Catherine L.
Published in Proceedings of the National Academy of Sciences - PNAS (01.11.2016)
Published in Proceedings of the National Academy of Sciences - PNAS (01.11.2016)
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Journal Article
Pathways of thymidine hypermodification
Lee, Yan-Jiun, Dai, Nan, Müller, Stephanie I, Guan, Chudi, Parker, Mackenzie J, Fraser, Morgan E, Walsh, Shannon E, Sridar, Janani, Mulholland, Andrew, Nayak, Krutika, Sun, Zhiyi, Lin, Yu-Cheng, Comb, Donald G, Marks, Katherine, Gonzalez, Reyaz, Dowling, Daniel P, Bandarian, Vahe, Saleh, Lana, Corrêa, Ivan R, Weigele, Peter R
Published in Nucleic acids research (08.04.2022)
Published in Nucleic acids research (08.04.2022)
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Journal Article
Structural Basis of the Antiproliferative Activity of Largazole, a Depsipeptide Inhibitor of the Histone Deacetylases
Cole, Kathryn E, Dowling, Daniel P, Boone, Matthew A, Phillips, Andrew J, Christianson, David W
Published in Journal of the American Chemical Society (17.08.2011)
Published in Journal of the American Chemical Society (17.08.2011)
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Journal Article
Current understanding of enzyme structure and function in bacterial two-component flavin-dependent desulfonases: Cleaving C–S bonds of organosulfur compounds
Liew, Jeremy J.M., Wicht, Denyce K., Gonzalez, Reyaz, Dowling, Daniel P., Ellis, Holly R.
Published in Archives of biochemistry and biophysics (01.08.2024)
Published in Archives of biochemistry and biophysics (01.08.2024)
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Journal Article
The NADH recycling enzymes TsaC and TsaD regenerate reducing equivalents for Rieske oxygenase chemistry
Tian, Jiayi, Boggs, David G., Donnan, Patrick H., Barroso, Gage T., Garcia, Alejandro Arcadio, Dowling, Daniel P., Buss, Joshua A., Bridwell-Rabb, Jennifer
Published in The Journal of biological chemistry (01.10.2023)
Published in The Journal of biological chemistry (01.10.2023)
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Journal Article
Structures of the alkanesulfonate monooxygenase MsuD provide insight into C–S bond cleavage, substrate scope, and an unexpected role for the tetramer
Liew, Jeremy J.M., El Saudi, Israa M., Nguyen, Son V., Wicht, Denyce K., Dowling, Daniel P.
Published in The Journal of biological chemistry (01.07.2021)
Published in The Journal of biological chemistry (01.07.2021)
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Journal Article
Structural diversity in the AdoMet radical enzyme superfamily
Dowling, Daniel P., Vey, Jessica L., Croft, Anna K., Drennan, Catherine L.
Published in Biochimica et biophysica acta (01.11.2012)
Published in Biochimica et biophysica acta (01.11.2012)
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Journal Article
High-resolution structures of a siderophore-producing cyclization domain from Yersinia pestis offer a refined proposal of substrate binding
Gnann, Andrew D., Xia, Yuan, Soule, Jess, Barthélemy, Clara, Mawani, Jayata S., Musoke, Sarah Nzikoba, Castellano, Brian M., Brignole, Edward J., Frueh, Dominique P., Dowling, Daniel P.
Published in The Journal of biological chemistry (01.10.2022)
Published in The Journal of biological chemistry (01.10.2022)
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Journal Article
Molecular basis of cobalamin-dependent RNA modification
Dowling, Daniel P, Miles, Zachary D, Köhrer, Caroline, Maiocco, Stephanie J, Elliott, Sean J, Bandarian, Vahe, Drennan, Catherine L
Published in Nucleic acids research (15.09.2016)
Published in Nucleic acids research (15.09.2016)
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Journal Article
Radical use of Rossmann and TIM barrel architectures for controlling coenzyme B12 chemistry
Dowling, Daniel P, Croft, Anna K, Drennan, Catherine L
Published in Annual review of biophysics (09.06.2012)
Published in Annual review of biophysics (09.06.2012)
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Journal Article
7‑Carboxy-7-deazaguanine Synthase: A Radical S‑Adenosyl‑l‑methionine Enzyme with Polar Tendencies
Bruender, Nathan A, Grell, Tsehai A. J, Dowling, Daniel P, McCarty, Reid M, Drennan, Catherine L, Bandarian, Vahe
Published in Journal of the American Chemical Society (08.02.2017)
Published in Journal of the American Chemical Society (08.02.2017)
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Journal Article