Genomic data integration tutorial, a plant case study
Mardoc, Emile, Sow, Mamadou Dia, Déjean, Sébastien, Salse, Jérôme
Published in BMC genomics (17.01.2024)
Published in BMC genomics (17.01.2024)
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Journal Article
DNA hypomethylation of the host tree impairs interaction with mutualistic ectomycorrhizal fungus
Vigneaud, Julien, Kohler, Annegret, Sow, Mamadou Dia, Delaunay, Alain, Fauchery, Laure, Guinet, Frederic, Daviaud, Christian, Barry, Kerrie W., Keymanesh, Keykhosrow, Johnson, Jenifer, Singan, Vasanth, Grigoriev, Igor, Fichot, Régis, Conde, Daniel, Perales, Mariano, Tost, Jörg, Martin, Francis M., Allona, Isabel, Strauss, Steven H., Veneault‐Fourrey, Claire, Maury, Stéphane
Published in The New phytologist (01.06.2023)
Published in The New phytologist (01.06.2023)
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Journal Article
Tracing 100 million years of grass genome evolutionary plasticity
Bellec, Arnaud, Sow, Mamadou Dia, Pont, Caroline, Civan, Peter, Mardoc, Emile, Duchemin, Wandrille, Armisen, David, Huneau, Cécile, Thévenin, Johanne, Vernoud, Vanessa, Depège‐Fargeix, Nathalie, Maunas, Laurent, Escale, Brigitte, Dubreucq, Bertrand, Rogowsky, Peter, Bergès, Hélène, Salse, Jerome
Published in The Plant journal : for cell and molecular biology (01.06.2023)
Published in The Plant journal : for cell and molecular biology (01.06.2023)
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Journal Article
Low impact of polyploidization on the transcriptome of synthetic allohexaploid wheat
Banouh, Meriem, Armisen, David, Bouguennec, Annaig, Huneau, Cécile, Sow, Mamadou Dia, Pont, Caroline, Salse, Jérôme, Civáň, Peter
Published in BMC genomics (11.05.2023)
Published in BMC genomics (11.05.2023)
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Journal Article
Advances and Promises of Epigenetics for Forest Trees
Amaral, Joana, Ribeyre, Zoé, Vigneaud, Julien, Sow, Mamadou Dia, Fichot, Régis, Messier, Christian, Pinto, Gloria, Nolet, Philippe, Maury, Stéphane
Published in Forests (01.09.2020)
Published in Forests (01.09.2020)
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Journal Article
Narrow-sense heritability and P ST estimates of DNA methylation in three Populus nigra L. populations under contrasting water availability
Mamadou Dia Sow, Segura, Vincent, Chamaillard, Sylvain, Jorge, Véronique, Delaunay, Alain, Lafon-Placette, Clément, Fichot, Régis, Faivre-Rampant, Patricia, Villar, Marc, Brignolas, Franck, Maury, Stéphane
Published in Tree genetics & genomes (01.10.2018)
Published in Tree genetics & genomes (01.10.2018)
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Journal Article
A simple ATAC-seq protocol for population epigenetics
Augusto, Ronaldo de Carvalho, Rey, Oliver, Cosseau, Céline, Chaparro, Cristian, Vidal-Dupiol, Jérémie, Allienne, Jean-François, Duval, David, Pinaud, Silvain, Tönges, Sina, Andriantsoa, Ranja, Luquet, Emilien, Aubret, Fabien, Dia Sow, Mamadou, David, Patrice, Thomson, Vicki, Joly, Dominique, Gomes Lima, Mariana, Federico, Déborah, Danchin, Etienne, Minoda, Aki, Grunau, Christoph
Published in Wellcome open research (07.01.2021)
Published in Wellcome open research (07.01.2021)
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Journal Article
RNAi suppression of DNA methylation affects the drought stress response and genome integrity in transgenic poplar
Sow, Mamadou D., Le Gac, Anne‐Laure, Fichot, Régis, Lanciano, Sophie, Delaunay, Alain, Le Jan, Isabelle, Lesage‐Descauses, Marie‐Claude, Citerne, Sylvie, Caius, Jose, Brunaud, Véronique, Soubigou‐Taconnat, Ludivine, Cochard, Hervé, Segura, Vincent, Chaparro, Cristian, Grunau, Christoph, Daviaud, Christian, Tost, Jörg, Brignolas, Franck, Strauss, Steven H., Mirouze, Marie, Maury, Stéphane
Published in The New phytologist (01.10.2021)
Published in The New phytologist (01.10.2021)
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Journal Article
A strategy for studying epigenetic diversity in natural populations: proof of concept in poplar and oak
Lesur, Isabelle, Rogier, Odile, Sow, Mamadou Dia, Boury, Christophe, Duplan, Alexandre, Garnier, Abel, Senhaji-Rachik, Abdeljalil, Civan, Peter, Daron, Josquin, Delaunay, Alain, Duvaux, Ludovic, Benoit, Vanina, Guichoux, Erwan, Le Provost, Grégoire, Sanou, Edmond, Ambroise, Christophe, Plomion, Christophe, Salse, Jérôme, Segura, Vincent, Tost, Jörg, Maury, Stéphane
Published in Journal of experimental botany (27.09.2024)
Published in Journal of experimental botany (27.09.2024)
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Journal Article
A strategy for studying epigenetic diversity in natural populations: proof of concept in poplar and oak
Lesur, Isabelle, Rogier, Odile, Sow, Mamadou Dia, Boury, Christophe, Duplan, Alexandre, Garnier, Abel, Senhaji-Rachik, Abdeljalil, Civan, Peter, Daron, Josquin, Delaunay, Alain, Duvaux, Ludovic, Benoit, Vanina, Guichoux, Erwan, Le Provost, Grégoire, Sanou, Edmond, Ambroise, Christophe, Plomion, Christophe, Salse, Jérôme, Segura, Vincent, Tost, Jörg, Maury, Stéphane
Published in Journal of experimental botany (19.08.2024)
Published in Journal of experimental botany (19.08.2024)
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Journal Article
Narrow-sense heritability and PST estimates of DNA methylation in three Populus nigra L. populations under contrasting water availability
Sow, Mamadou Dia, Segura, Vincent, Chamaillard, Sylvain, Jorge, Véronique, Delaunay, Alain, Lafon-Placette, Clément, Fichot, Régis, Faivre-Rampant, Patricia, Villar, Marc, Brignolas, Franck, Maury, Stéphane
Published in Tree genetics & genomes (01.10.2018)
Published in Tree genetics & genomes (01.10.2018)
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Journal Article
Chromatin structure changes in Daphnia populations upon exposure to environmental cues - or - The discovery of Wolterecks "Matrix"
Ronaldo De Carvalho Augusto, Minoda, Aki, Rey, Oliver, Cosseau, Celine, Chaparro, Cristian, Vidal-Dupiol, Jeremie, Jean-Francois Allienne, Duval, David, Pinaud, Silvain, Tonges, Sina, Andriantsoa, Ranja, Luquet, Emilien, Aubret, Fabien, Mamadou Dia Sow, Patrice, David, Thomson, Vicki Ann, Federico, Deborah, Joly, Dominique, Lima, Mariana, Danchin, Etienne, Grunau, Christoph
Published in bioRxiv (30.10.2019)
Published in bioRxiv (30.10.2019)
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Paper
A simple ATAC-seq protocol for population epigenetics
Augusto, Ronaldo de Carvalho, Rey, Oliver, Cosseau, Céline, Chaparro, Cristian, Vidal-Dupiol, Jérémie, Allienne, Jean-François, Duval, David, Pinaud, Silvain, Tönges, Sina, Andriantsoa, Ranja, Luquet, Emilien, Aubret, Fabien, Dia Sow, Mamadou, David, Patrice, Thomson, Vicki, Joly, Dominique, Gomes Lima, Mariana, Federico, Déborah, Danchin, Etienne, Minoda, Aki, Grunau, Christoph
Published in Wellcome open research (2020)
Published in Wellcome open research (2020)
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Journal Article
Hypomethylated poplars show higher tolerance to water deficit and highlight a dual role for DNA methylation in shoot meristem: regulation of stress response and genome integrity
Mamadou Dia Sow, Anne-Laure Le Gac, Fichot, Régis, Lanciano, Sophie, Delaunay, Alain, Isabelle Le Jan, Lesage-Descauses, Marie-Claude, Citerne, Sylvie, Caius, Jose, Brunaud, Véronique, Soubigou-Taconnat, Ludivine, Cochard, Hervé, Segura, Vincent, Chaparro, Cristian, Grunau, Christoph, Daviaud, Christian, Tost, Jorg, Brignolas, Franck, Strauss, Steven H, Mirouze, Marie, Maury, Stephane
Published in bioRxiv (20.04.2020)
Published in bioRxiv (20.04.2020)
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Paper