MobiDB 2.0: an improved database of intrinsically disordered and mobile proteins
Potenza, Emilio, Di Domenico, Tomás, Walsh, Ian, Tosatto, Silvio C E
Published in Nucleic acids research (28.01.2015)
Published in Nucleic acids research (28.01.2015)
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APPRIS 2017: principal isoforms for multiple gene sets
Rodriguez, Jose Manuel, Rodriguez-Rivas, Juan, Di Domenico, Tomás, Vázquez, Jesús, Valencia, Alfonso, Tress, Michael L
Published in Nucleic acids research (04.01.2018)
Published in Nucleic acids research (04.01.2018)
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ESpritz: accurate and fast prediction of protein disorder
Walsh, Ian, Martin, Alberto J. M., Di Domenico, Tomàs, Tosatto, Silvio C. E.
Published in Bioinformatics (15.02.2012)
Published in Bioinformatics (15.02.2012)
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Beyondcell: targeting cancer therapeutic heterogeneity in single-cell RNA-seq data
Fustero-Torre, Coral, Jiménez-Santos, María José, García-Martín, Santiago, Carretero-Puche, Carlos, García-Jimeno, Luis, Ivanchuk, Vadym, Di Domenico, Tomás, Gómez-López, Gonzalo, Al-Shahrour, Fátima
Published in Genome medicine (16.12.2021)
Published in Genome medicine (16.12.2021)
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Assessing the functional relevance of splice isoforms
Pozo, Fernando, Martinez-Gomez, Laura, Walsh, Thomas A, Rodriguez, José Manuel, Di Domenico, Tomas, Abascal, Federico, Vazquez, Jesús, Tress, Michael L
Published in NAR genomics and bioinformatics (01.06.2021)
Published in NAR genomics and bioinformatics (01.06.2021)
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Comprehensive large-scale assessment of intrinsic protein disorder
Walsh, Ian, Giollo, Manuel, Di Domenico, Tomás, Ferrari, Carlo, Zimmermann, Olav, Tosatto, Silvio C E
Published in Bioinformatics (Oxford, England) (15.01.2015)
Published in Bioinformatics (Oxford, England) (15.01.2015)
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GENCODE 2021
Frankish, Adam, Diekhans, Mark, Jungreis, Irwin, Lagarde, Julien, Loveland, Jane E, Mudge, Jonathan M, Sisu, Cristina, Wright, James C, Armstrong, Joel, Barnes, If, Berry, Andrew, Bignell, Alexandra, Boix, Carles, Carbonell Sala, Silvia, Cunningham, Fiona, Di Domenico, Tomás, Donaldson, Sarah, Fiddes, Ian T, García Girón, Carlos, Gonzalez, Jose Manuel, Grego, Tiago, Hardy, Matthew, Hourlier, Thibaut, Howe, Kevin L, Hunt, Toby, Izuogu, Osagie G, Johnson, Rory, Martin, Fergal J, Martínez, Laura, Mohanan, Shamika, Muir, Paul, Navarro, Fabio C P, Parker, Anne, Pei, Baikang, Pozo, Fernando, Riera, Ferriol Calvet, Ruffier, Magali, Schmitt, Bianca M, Stapleton, Eloise, Suner, Marie-Marthe, Sycheva, Irina, Uszczynska-Ratajczak, Barbara, Wolf, Maxim Y, Xu, Jinuri, Yang, Yucheng T, Yates, Andrew, Zerbino, Daniel, Zhang, Yan, Choudhary, Jyoti S, Gerstein, Mark, Guigó, Roderic, Hubbard, Tim J P, Kellis, Manolis, Paten, Benedict, Tress, Michael L, Flicek, Paul
Published in Nucleic Acids Research (08.01.2021)
Published in Nucleic Acids Research (08.01.2021)
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Web Resource
An analysis of tissue-specific alternative splicing at the protein level
Rodriguez, Jose Manuel, Pozo, Fernando, di Domenico, Tomas, Vazquez, Jesus, Tress, Michael L
Published in PLoS computational biology (05.10.2020)
Published in PLoS computational biology (05.10.2020)
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Journal Article
APPRIS: selecting functionally important isoforms
Rodriguez, Jose Manuel, Pozo, Fernando, Cerdán-Vélez, Daniel, Di Domenico, Tomás, Vázquez, Jesús, Tress, Michael L
Published in Nucleic acids research (07.01.2022)
Published in Nucleic acids research (07.01.2022)
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Journal Article
MobiDB: a comprehensive database of intrinsic protein disorder annotations
DI DOMENICO, Tomás, WALSH, Ian, MARTIN, Alberto J. M, TOSATTO, Silvio C. E
Published in Bioinformatics (01.08.2012)
Published in Bioinformatics (01.08.2012)
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vulcanSpot: a tool to prioritize therapeutic vulnerabilities in cancer
Perales-Patón, Javier, Di Domenico, Tomás, Fustero-Torre, Coral, Piñeiro-Yáñez, Elena, Carretero-Puche, Carlos, Tejero, Héctor, Valencia, Alfonso, Gómez-López, Gonzalo, Al-Shahrour, Fátima
Published in Bioinformatics (01.11.2019)
Published in Bioinformatics (01.11.2019)
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Journal Article
MobiDB 2.0: an improved database of intrinsically disordered and mobile proteins
Potenza, Emilio, Domenico, Tomás Di, Walsh, Ian, Tosatto, Silvio C.E.
Published in Nucleic acids research (28.01.2015)
Published in Nucleic acids research (28.01.2015)
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Journal Article
The Profile and Dynamics of RNA Modifications in Animals
van Delft, Pieter, Akay, Alper, Huber, Sabrina M., Bueschl, Christoph, Rudolph, Konrad L. M., Di Domenico, Tomás, Schuhmacher, Rainer, Miska, Eric A., Balasubramanian, Shankar
Published in Chembiochem : a European journal of chemical biology (01.06.2017)
Published in Chembiochem : a European journal of chemical biology (01.06.2017)
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Journal Article
Networks of high mutual information define the structural proximity of catalytic sites: implications for catalytic residue identification
Marino Buslje, Cristina, Teppa, Elin, Di Doménico, Tomas, Delfino, José María, Nielsen, Morten
Published in PLoS computational biology (04.11.2010)
Published in PLoS computational biology (04.11.2010)
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Journal Article
CSpritz: accurate prediction of protein disorder segments with annotation for homology, secondary structure and linear motifs
Walsh, Ian, Martin, Alberto J. M., Di Domenico, Tomàs, Vullo, Alessandro, Pollastri, Gianluca, Tosatto, Silvio C. E.
Published in Nucleic acids research (01.07.2011)
Published in Nucleic acids research (01.07.2011)
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Highlights from the tenth ISCB Student Council Symposium 2014
Rahman, Farzana, Wilkins, Katie, Jacobsen, Annika, Junge, Alexander, Vicedo, Esmeralda, DeBlasio, Dan, Jigisha, Anupama, Di Domenico, Tomás
Published in BMC bioinformatics (28.01.2015)
Published in BMC bioinformatics (28.01.2015)
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Conference Proceeding
Highlights from the ISCB Student Council Symposium 2013
Di Domenico, Tomás, Prudence, Cynthia, Vicedo, Esmeralda, Guney, Emre, Jigisha, Anupama, Shanmugam, Avinash
Published in BMC bioinformatics (11.02.2014)
Published in BMC bioinformatics (11.02.2014)
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Journal Article
Terminal uridylyltransferases target RNA viruses as part of the innate immune system
Le Pen, Jérémie, Jiang, Hongbing, Di Domenico, Tomás, Kneuss, Emma, Kosałka, Joanna, Leung, Christian, Morgan, Marcos, Much, Christian, Rudolph, Konrad L. M., Enright, Anton J., O’Carroll, Dónal, Wang, David, Miska, Eric A.
Published in Nature structural & molecular biology (01.09.2018)
Published in Nature structural & molecular biology (01.09.2018)
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