by Alser, Mohammed, Rotman, Jeremy, Deshpande, Dhrithi, Taraszka, Kodi, Shi, Huwenbo, Baykal, Pelin Icer, Yang, Harry Taegyun, Xue, Victor, Knyazev, Sergey, Singer, Benjamin D, Balliu, Brunilda, Koslicki, David, Skums, Pavel, Zelikovsky, Alex, Alkan, Can, Mutlu, Onur, Mangul, Serghei
Published in Genome Biology (26.08.2021)

by Knyazev, Sergey, Chhugani, Karishma, Sarwal, Varuni, Ayyala, Ram, Singh, Harman, Karthikeyan, Smruthi, Deshpande, Dhrithi, Baykal, Pelin Icer, Comarova, Zoia, Lu, Angela, Porozov, Yuri, Vasylyeva, Tetyana I, Wertheim, Joel O, Tierney, Braden T, Chiu, Charles Y, Sun, Ren, Wu, Aiping, Abedalthagafi, Malak S, Pak, Victoria M, Nagaraj, Shivashankar H, Smith, Adam L, Skums, Pavel, Pasaniuc, Bogdan, Komissarov, Andrey, Mason, Christopher E, Bortz, Eric, Lemey, Philippe, Kondrashov, Fyodor, Beerenwinkel, Niko, Lam, Tommy Tsan-Yuk, Wu, Nicholas C, Zelikovsky, Alex, Knight, Rob, Crandall, Keith A, Mangul, Serghei
Published in Nature methods (01.04.2022)

by Deshpande, Dhrithi, Chhugani, Karishma, Chang, Yutong, Karlsberg, Aaron, Loeffler, Caitlin, Zhang, Jinyang, Muszyńska, Agata, Munteanu, Viorel, Yang, Harry, Rotman, Jeremy, Tao, Laura, Balliu, Brunilda, Tseng, Elizabeth, Eskin, Eleazar, Zhao, Fangqing, Mohammadi, Pejman, P Łabaj, Paweł, Mangul, Serghei
Published in Frontiers in genetics (13.03.2023)

by Sharma, Nitesh Kumar, Ayyala, Ram, Deshpande, Dhrithi, Patel, Yesha, Munteanu, Viorel, Ciorba, Dumitru, Bostan, Viorel, Fiscutean, Andrada, Vahed, Mohammad, Sarkar, Aditya, Guo, Ruiwei, Moore, Andrew, Darci-Maher, Nicholas, Nogoy, Nicole, Abedalthagafi, Malak, Mangul, Serghei
Published in PeerJ. Computer science (28.06.2024)

by Skariyachan, Sinosh, Gopal, Dharshini, Deshpande, Dhrithi, Joshi, Anusha, Uttarkar, Akshay, Niranjan, Vidya
Published in Infection, genetics and evolution (01.12.2021)

by Deshpande, Dhrithi, Chhugani, Karishma, Ramesh, Tejasvene, Pellegrini, Matteo, Shiffman, Sagiv, Abedalthagafi, Malak S., Alqahtani, Saleh, Ye, Jimmie, Liu, Xiaole Shirley, Leek, Jeffrey T., Brazma, Alvis, Ophoff, Roel A., Rao, Gauri, Butte, Atul J., Moore, Jason H., Katritch, Vsevolod, Mangul, Serghei
Published in Cell (22.08.2024)

by Skariyachan, Sinosh, Deshpande, Dhrithi, Joshi, Anusha, Subramanya, Nischita, Kale, Shreeya, Narayanappa, Rajeswari
Published in Environmental technology & innovation (01.11.2021)

by Yang, Jamie O, Zinter, Matt S, Pellegrini, Matteo, Wong, Man Yee, Gala, Kinisha, Markovic, Daniela, Nadel, Brian, Peng, Kerui, Do, Nguyen, Mangul, Serghei, Nadkarni, Vinay M, Karlsberg, Aaron, Deshpande, Dhrithi, Butte, Manish J, Asaro, Lisa, Agus, Michael, Sapru, Anil
Published in Critical care (London, England) (08.12.2023)

by Yang, Jamie O, Zinter, Matt S, Pellegrini, Matteo, Wong, Man Yee, Gala, Kinisha, Markovic, Daniela, Nadel, Brian, Peng, Kerui, Do, Nguyen, Mangul, Serghei, Nadkarni, Vinay M, Karlsberg, Aaron, Deshpande, Dhrithi, Butte, Manish J, Asaro, Lisa, Agus, Michael, Sapru, Anil
Published in Research square (28.08.2023)

by Sharma, Nitesh Kumar, Ayyala, Ram, Deshpande, Dhrithi, Patel, Yesha M, Munteanu, Viorel, Ciorba, Dumitru, Fiscutean, Andrada, Vahed, Mohammad, Sarkar, Aditya, Guo, Ruiwei, Moore, Andrew, Darci-Maher, Nicholas, Nogoy, Nicole A, Abedalthagafi, Malak S, Mangul, Serghei
Published in bioRxiv : the preprint server for biology (07.08.2023)

by Sharma, Nitesh Kumar, Ayyala, Ram, Deshpande, Dhrithi, Patel, Yesha M, Munteanu, Viorel, Ciorba, Dumitru, Fiscutean, Andrada, Vahed, Mohammad, Sarkar, Aditya, Guo, Ruiwei, Moore, Andrew, Darci-Maher, Nicholas, Nogoy, Nicole A, Abedalthagafi, Malak S, Mangul, Serghei
Published in bioRxiv (07.08.2023)

by Huang, Yu-Ning, Love, Michael I, Ronkowski, Cynthia Flaire, Deshpande, Dhrithi, Schriml, Lynn M, Wong-Beringer, Annie, Mons, Barend, Corbett-Detig, Russell, Hunter, Christopher I, Moore, Jason H, Garmire, Lana X, Reddy, T. B. K, Hide, Winston A, Butte, Atul J, Robinson, Mark D, Mangul, Serghei
Year of Publication 22.11.2023

by Deshpande, Dhrithi, Chhugani, Karishma, Chang, Yutong, Karlsberg, Aaron, Loeffler, Caitlin, Zhang, Jinyang, Muszynska, Agata, Rotman, Jeremy, Tao, Laura, Balliu, Brunilda, Tseng, Elizabeth, Eskin, Eleazar, Zhao, Fangqing, Mohammadi, Pejman, Labaj, Pawel P, Serghei Mangul
Published in arXiv.org (16.02.2021)

by Knyazev, Sergey, Chhugani, Karishma, Sarwal, Varuni, Ayyala, Ram, Singh, Harman, Karthikeyan, Smruthi, Deshpande, Dhrithi, Comarova, Zoia, Lu, Angela, Porozov, Yuri, Wu, Aiping, Abedalthagafi, Malak, Shivashankar Nagaraj, Smith, Adam, Skums, Pavel, Ladner, Jason, Tommy Tsan-Yuk Lam, Wu, Nicholas, Zelikovsky, Alex, Knight, Rob, Crandall, Keith, Serghei Mangul
Published in arXiv.org (04.06.2021)

by Knyazev, Sergey, Chhugani, Karishma, Sarwal, Varuni, Ayyala, Ram, Singh, Harman, Karthikeyan, Smruthi, Deshpande, Dhrithi, Comarova, Zoia, Lu, Angela, Porozov, Yuri, Wu, Aiping, Abedalthagafi, Malak S., Nagaraj, Shivashankar H., Smith, Adam L., Skums, Pavel, Ladner, Jason, Tsan-Yuk Lam, Tommy, Wu, Nicholas C., Zelikovsky, Alex, Knight, Rob, Crandall, Keith A., Mangul, Serghei
Published in ArXiv.org (28.04.2021)

by Knyazev, Sergey, Chhugani, Karishma, Sarwal, Varuni, Ayyala, Ram, Singh, Harman, Karthikeyan, Smruthi, Deshpande, Dhrithi, Comarova, Zoia, Lu, Angela, Porozov, Yuri, Wu, Aiping, Abedalthagafi, Malak, Nagaraj, Shivashankar, Smith, Adam, Skums, Pavel, Ladner, Jason, Lam, Tommy Tsan-Yuk, Wu, Nicholas, Zelikovsky, Alex, Knight, Rob, Crandall, Keith, Mangul, Serghei
Published in ArXiv.org (28.04.2021)

by Knyazev, Sergey, Chhugani, Karishma, Sarwal, Varuni, Ayyala, Ram, Singh, Harman, Karthikeyan, Smruthi, Deshpande, Dhrithi, Comarova, Zoia, Lu, Angela, Porozov, Yuri, Wu, Aiping, Abedalthagafi, Malak S, Nagaraj, Shivashankar H, Smith, Adam L, Skums, Pavel, Ladner, Jason, Lam, Tommy Tsan-Yuk, Wu, Nicholas C, Zelikovsky, Alex, Knight, Rob, Crandall, Keith A, Mangul, Serghei
Published in ArXiv (28.04.2021)