A scalable, fully automated process for construction of sequence-ready human exome targeted capture libraries
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Published in Genome biology (04.01.2011)
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An esophagus cell atlas reveals dynamic rewiring during active eosinophilic esophagitis and remission
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Published in Nature communications (18.04.2024)
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A single-cell survey of the small intestinal epithelium
Haber, Adam L, Biton, Moshe, Rogel, Noga, Herbst, Rebecca H, Shekhar, Karthik, Smillie, Christopher, Burgin, Grace, Delorey, Toni M, Howitt, Michael R, Katz, Yarden, Tirosh, Itay, Beyaz, Semir, Dionne, Danielle, Zhang, Mei, Raychowdhury, Raktima, Garrett, Wendy S, Rozenblatt-Rosen, Orit, Shi, Hai Ning, Yilmaz, Omer, Xavier, Ramnik J, Regev, Aviv
Published in Nature (London) (16.11.2017)
Published in Nature (London) (16.11.2017)
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Stem-like intestinal Th17 cells give rise to pathogenic effector T cells during autoimmunity
Schnell, Alexandra, Huang, Linglin, Singer, Meromit, Singaraju, Anvita, Barilla, Rocky M., Regan, Brianna M.L., Bollhagen, Alina, Thakore, Pratiksha I., Dionne, Danielle, Delorey, Toni M., Pawlak, Mathias, Meyer zu Horste, Gerd, Rozenblatt-Rosen, Orit, Irizarry, Rafael A., Regev, Aviv, Kuchroo, Vijay K.
Published in Cell (22.12.2021)
Published in Cell (22.12.2021)
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The CD4+ T cell response to a commensal-derived epitope transitions from a tolerant to an inflammatory state in Crohn’s disease
Pedersen, Thomas K., Brown, Eric M., Plichta, Damian R., Johansen, Joachim, Twardus, Shaina W., Delorey, Toni M., Lau, Helena, Vlamakis, Hera, Moon, James J., Xavier, Ramnik J., Graham, Daniel B.
Published in Immunity (Cambridge, Mass.) (11.10.2022)
Published in Immunity (Cambridge, Mass.) (11.10.2022)
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Stepwise-edited, human melanoma models reveal mutations' effect on tumor and microenvironment
Hodis, Eran, Torlai Triglia, Elena, Kwon, John Y H, Biancalani, Tommaso, Zakka, Labib R, Parkar, Saurabh, Hütter, Jan-Christian, Buffoni, Lorenzo, Delorey, Toni M, Phillips, Devan, Dionne, Danielle, Nguyen, Lan T, Schapiro, Denis, Maliga, Zoltan, Jacobson, Connor A, Hendel, Ayal, Rozenblatt-Rosen, Orit, Mihm, Jr, Martin C, Garraway, Levi A, Regev, Aviv
Published in Science (American Association for the Advancement of Science) (29.04.2022)
Published in Science (American Association for the Advancement of Science) (29.04.2022)
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Remodeling of colon plasma cell repertoire within ulcerative colitis patients
Scheid, Johannes F, Eraslan, Basak, Hudak, Andrew, Brown, Eric M, Sergio, Dallis, Delorey, Toni M, Phillips, Devan, Lefkovith, Ariel, Jess, Alison T, Duck, Lennard W, Elson, Charles O, Vlamakis, Hera, Plichta, Damian R, Deguine, Jacques, Ananthakrishnan, Ashwin N, Graham, Daniel B, Regev, Aviv, Xavier, Ramnik J
Published in The Journal of experimental medicine (03.04.2023)
Published in The Journal of experimental medicine (03.04.2023)
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A single-nucleus and spatial transcriptomic atlas of the COVID-19 liver reveals topological, functional, and regenerative organ disruption in patients
Pita-Juarez, Yered, Karagkouni, Dimitra, Kalavros, Nikolaos, Melms, Johannes C, Niezen, Sebastian, Delorey, Toni M, Essene, Adam L, Brook, Olga R, Pant, Deepti, Skelton-Badlani, Disha, Naderi, Pourya, Huang, Pinzhu, Pan, Liuliu, Hether, Tyler, Andrews, Tallulah S, Ziegler, Carly G K, Reeves, Jason, Myloserdnyy, Andriy, Chen, Rachel, Nam, Andy, Phelan, Stefan, Liang, Yan, Amin, Amit Dipak, Biermann, Jana, Hibshoosh, Hanina, Veregge, Molly, Kramer, Zachary, Jacobs, Christopher, Yalcin, Yusuf, Phillips, Devan, Slyper, Michal, Subramanian, Ayshwarya, Ashenberg, Orr, Bloom-Ackermann, Zohar, Tran, Victoria M, Gomez, James, Sturm, Alexander, Zhang, Shuting, Fleming, Stephen J, Warren, Sarah, Beechem, Joseph, Hung, Deborah, Babadi, Mehrtash, Padera, Jr, Robert F, MacParland, Sonya A, Bader, Gary D, Imad, Nasser, Solomon, Isaac H, Miller, Eric, Riedel, Stefan, Porter, Caroline B M, Villani, Alexandra-Chloé, Tsai, Linus T-Y, Hide, Winston, Szabo, Gyongyi, Hecht, Jonathan, Rozenblatt-Rosen, Orit, Shalek, Alex K, Izar, Benjamin, Regev, Aviv, Popov, Yury, Jiang, Z Gordon, Vlachos, Ioannis S
Published in bioRxiv : the preprint server for biology (28.10.2022)
Published in bioRxiv : the preprint server for biology (28.10.2022)
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Single-cell clonotype tracing of tissue Th17 cells during CNS autoimmunity reveals the conversion of intestinal homeostatic cells to pathogenic cells
Schnell, Alexandra, Huang, Linglin, Singer, Meromit, Singaraju, Anvita, Bollhagen, Alina, Thakore, Pratiksha I, Dionne, Danielle, Delorey, Toni M, Pawlak, Mathias, Irizarry, Rafael, Regev, Aviv, Kuchroo, Vijay K
Published in The Journal of immunology (1950) (01.05.2021)
Published in The Journal of immunology (1950) (01.05.2021)
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