Reshuffling yeast chromosomes with CRISPR/Cas9
Fleiss, Aubin, O'Donnell, Samuel, Fournier, Téo, Lu, Wenqing, Agier, Nicolas, Delmas, Stéphane, Schacherer, Joseph, Fischer, Gilles
Published in PLoS genetics (29.08.2019)
Published in PLoS genetics (29.08.2019)
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Journal Article
Telomere-to-telomere assemblies of 142 strains characterize the genome structural landscape in Saccharomyces cerevisiae
O’Donnell, Samuel, Yue, Jia-Xing, Saada, Omar Abou, Agier, Nicolas, Caradec, Claudia, Cokelaer, Thomas, De Chiara, Matteo, Delmas, Stéphane, Dutreux, Fabien, Fournier, Téo, Friedrich, Anne, Kornobis, Etienne, Li, Jing, Miao, Zepu, Tattini, Lorenzo, Schacherer, Joseph, Liti, Gianni, Fischer, Gilles
Published in Nature genetics (01.08.2023)
Published in Nature genetics (01.08.2023)
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Journal Article
The complete genome sequence of Haloferax volcanii DS2, a model archaeon
Hartman, Amber L, Norais, Cédric, Badger, Jonathan H, Delmas, Stéphane, Haldenby, Sam, Madupu, Ramana, Robinson, Jeffrey, Khouri, Hoda, Ren, Qinghu, Lowe, Todd M, Maupin-Furlow, Julie, Pohlschroder, Mecky, Daniels, Charles, Pfeiffer, Friedhelm, Allers, Thorsten, Eisen, Jonathan A
Published in PloS one (19.03.2010)
Published in PloS one (19.03.2010)
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Journal Article
Uncovering the genome-wide transcriptional responses of the filamentous fungus Aspergillus niger to lignocellulose using RNA sequencing
Delmas, Stéphane, Pullan, Steven T, Gaddipati, Sanyasi, Kokolski, Matthew, Malla, Sunir, Blythe, Martin J, Ibbett, Roger, Campbell, Maria, Liddell, Susan, Aboobaker, Aziz, Tucker, Gregory A, Archer, David B
Published in PLoS genetics (01.08.2012)
Published in PLoS genetics (01.08.2012)
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Journal Article
The evolution of the temporal program of genome replication
Agier, Nicolas, Delmas, Stéphane, Zhang, Qing, Fleiss, Aubin, Jaszczyszyn, Yan, van Dijk, Erwin, Thermes, Claude, Weigt, Martin, Cosentino-Lagomarsino, Marco, Fischer, Gilles
Published in Nature communications (06.06.2018)
Published in Nature communications (06.06.2018)
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Journal Article
Genome-wide transcriptional response of Trichoderma reesei to lignocellulose using RNA sequencing and comparison with Aspergillus niger
Ries, Laure, Pullan, Steven T, Delmas, Stéphane, Malla, Sunir, Blythe, Martin J, Archer, David B
Published in BMC genomics (09.08.2013)
Published in BMC genomics (09.08.2013)
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Journal Article
DNA damage induces nucleoid compaction via the Mre11‐Rad50 complex in the archaeon Haloferax volcanii
Delmas, Stéphane, Duggin, Iain G., Allers, Thorsten
Published in Molecular microbiology (01.01.2013)
Published in Molecular microbiology (01.01.2013)
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Journal Article
The role of carbon starvation in the induction of enzymes that degrade plant-derived carbohydrates in Aspergillus niger
van Munster, Jolanda M., Daly, Paul, Delmas, Stéphane, Pullan, Steven T., Blythe, Martin J., Malla, Sunir, Kokolski, Matthew, Noltorp, Emelie C.M., Wennberg, Kristin, Fetherston, Richard, Beniston, Richard, Yu, Xiaolan, Dupree, Paul, Archer, David B.
Published in Fungal genetics and biology (01.11.2014)
Published in Fungal genetics and biology (01.11.2014)
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Journal Article
Development of an unmarked gene deletion system for the filamentous fungi Aspergillus niger and Talaromyces versatilis
Delmas, Stéphane, Llanos, Agustina, Parrou, Jean-Luc, Kokolski, Matthew, Pullan, Steven T, Shunburne, Lee, Archer, David B
Published in Applied and Environmental Microbiology (01.06.2014)
Published in Applied and Environmental Microbiology (01.06.2014)
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Journal Article
Helicase dissociation and annealing of RNA-DNA hybrids by Escherichia coli Cas3 protein
Howard, Jamieson A L, Delmas, Stephane, Ivančić-Baće, Ivana, Bolt, Edward L
Published in Biochemical journal (01.10.2011)
Published in Biochemical journal (01.10.2011)
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Journal Article
topIb, a phylogenetic hallmark gene of Thaumarchaeota encodes a functional eukaryote-like topoisomerase IB
Dahmane, Narimane, Gadelle, Danièle, Delmas, Stéphane, Criscuolo, Alexis, Eberhard, Stephan, Desnoues, Nicole, Collin, Sylvie, Zhang, Hongliang, Pommier, Yves, Forterre, Patrick, Sezonov, Guennadi
Published in Nucleic acids research (07.04.2016)
Published in Nucleic acids research (07.04.2016)
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Journal Article
Succession of physiological stages hallmarks the transcriptomic response of the fungus Aspergillus niger to lignocellulose
van Munster, Jolanda M, Daly, Paul, Blythe, Martin J, Ibbett, Roger, Kokolski, Matt, Gaddipati, Sanyasi, Lindquist, Erika, Singan, Vasanth R, Barry, Kerrie W, Lipzen, Anna, Ngan, Chew Yee, Petzold, Christopher J, Chan, Leanne Jade G, Arvas, Mikko, Raulo, Roxane, Pullan, Steven T, Delmas, Stéphane, Grigoriev, Igor V, Tucker, Gregory A, Simmons, Blake A, Archer, David B
Published in Biotechnology for biofuels (13.04.2020)
Published in Biotechnology for biofuels (13.04.2020)
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Journal Article
Expression of Aspergillus niger CAZymes is determined by compositional changes in wheat straw generated by hydrothermal or ionic liquid pretreatments
Daly, Paul, van Munster, Jolanda M, Blythe, Martin J, Ibbett, Roger, Kokolski, Matt, Gaddipati, Sanyasi, Lindquist, Erika, Singan, Vasanth R, Barry, Kerrie W, Lipzen, Anna, Ngan, Chew Yee, Petzold, Christopher J, Chan, Leanne Jade G, Pullan, Steven T, Delmas, Stéphane, Waldron, Paul R, Grigoriev, Igor V, Tucker, Gregory A, Simmons, Blake A, Archer, David B
Published in Biotechnology for biofuels (07.02.2017)
Published in Biotechnology for biofuels (07.02.2017)
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Journal Article
DNA damage induces nucleoid compaction via the Mre11‐Rad50 complex in the archaeon H aloferax volcanii
Delmas, Stéphane, Duggin, Iain G., Allers, Thorsten
Published in Molecular microbiology (01.01.2013)
Published in Molecular microbiology (01.01.2013)
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Journal Article