Bridger: a new framework for de novo transcriptome assembly using RNA-seq data
Chang, Zheng, Li, Guojun, Liu, Juntao, Zhang, Yu, Ashby, Cody, Liu, Deli, Cramer, Carole L, Huang, Xiuzhen
Published in Genome Biology (11.02.2015)
Published in Genome Biology (11.02.2015)
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FOXA1 mutations alter pioneering activity, differentiation and prostate cancer phenotypes
Adams, Elizabeth J., Karthaus, Wouter R., Hoover, Elizabeth, Liu, Deli, Gruet, Antoine, Zhang, Zeda, Cho, Hyunwoo, DiLoreto, Rose, Chhangawala, Sagar, Liu, Yang, Watson, Philip A., Davicioni, Elai, Sboner, Andrea, Barbieri, Christopher E., Bose, Rohit, Leslie, Christina S., Sawyers, Charles L.
Published in Nature (London) (01.07.2019)
Published in Nature (London) (01.07.2019)
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A novel sterol regulatory element-binding protein gene (sreA) identified in penicillium digitatum is required for prochloraz resistance, full virulence and erg11 (cyp51) regulation
Liu, Jing, Yuan, Yongze, Wu, Zhi, Li, Na, Chen, Yuanlei, Qin, Tingting, Geng, Hui, Xiong, Li, Liu, Deli
Published in PloS one (20.02.2015)
Published in PloS one (20.02.2015)
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SPOP Mutation Drives Prostate Tumorigenesis In Vivo through Coordinate Regulation of PI3K/mTOR and AR Signaling
Blattner, Mirjam, Liu, Deli, Robinson, Brian D., Huang, Dennis, Poliakov, Anton, Gao, Dong, Nataraj, Srilakshmi, Deonarine, Lesa D., Augello, Michael A., Sailer, Verena, Ponnala, Lalit, Ittmann, Michael, Chinnaiyan, Arul M., Sboner, Andrea, Chen, Yu, Rubin, Mark A., Barbieri, Christopher E.
Published in Cancer cell (13.03.2017)
Published in Cancer cell (13.03.2017)
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Journal Article
Characterization of two novel mycoviruses from Penicillium digitatum and the related fungicide resistance analysis
Niu, Yuhui, Yuan, Yongze, Mao, Jiali, Yang, Zhu, Cao, Qianwen, Zhang, Tingfu, Wang, Shengqiang, Liu, Deli
Published in Scientific reports (03.04.2018)
Published in Scientific reports (03.04.2018)
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Journal Article
CHD1 Loss Alters AR Binding at Lineage-Specific Enhancers and Modulates Distinct Transcriptional Programs to Drive Prostate Tumorigenesis
Augello, Michael A., Liu, Deli, Deonarine, Lesa D., Robinson, Brian D., Huang, Dennis, Stelloo, Suzan, Blattner, Mirjam, Doane, Ashley S., Wong, Elissa W.P., Chen, Yu, Rubin, Mark A., Beltran, Himisha, Elemento, Olivier, Bergman, Andries M., Zwart, Wilbert, Sboner, Andrea, Dephoure, Noah, Barbieri, Christopher E.
Published in Cancer cell (15.04.2019)
Published in Cancer cell (15.04.2019)
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Molecular homology and difference between spontaneous canine mammary cancer and human breast cancer
Liu, Deli, Xiong, Huan, Ellis, Angela E, Northrup, Nicole C, Rodriguez, Jr, Carlos O, O'Regan, Ruth M, Dalton, Stephen, Zhao, Shaying
Published in Cancer research (Chicago, Ill.) (15.09.2014)
Published in Cancer research (Chicago, Ill.) (15.09.2014)
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Covalent coupling of organophosphorus hydrolase loaded quantum dots to carbon nanotube/Au nanocomposite for enhanced detection of methyl parathion
Du, Dan, Chen, Wenjuan, Zhang, Weiying, Liu, Deli, Li, Haibing, Lin, Yuehe
Published in Biosensors & bioelectronics (15.02.2010)
Published in Biosensors & bioelectronics (15.02.2010)
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Journal Article
SPOP mutation leads to genomic instability in prostate cancer
Boysen, Gunther, Barbieri, Christopher E, Prandi, Davide, Blattner, Mirjam, Chae, Sung-Suk, Dahija, Arun, Nataraj, Srilakshmi, Huang, Dennis, Marotz, Clarisse, Xu, Limei, Huang, Julie, Lecca, Paola, Chhangawala, Sagar, Liu, Deli, Zhou, Pengbo, Sboner, Andrea, de Bono, Johann S, Demichelis, Francesca, Houvras, Yariv, Rubin, Mark A
Published in eLife (16.09.2015)
Published in eLife (16.09.2015)
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Journal Article
Integrative multiplatform molecular profiling of benign prostatic hyperplasia identifies distinct subtypes
Liu, Deli, Shoag, Jonathan E., Poliak, Daniel, Goueli, Ramy S., Ravikumar, Vaishali, Redmond, David, Vosoughi, Aram, Fontugne, Jacqueline, Pan, Heng, Lee, Daniel, Thomas, Domonique, Salari, Keyan, Wang, Zongwei, Romanel, Alessandro, Te, Alexis, Lee, Richard, Chughtai, Bilal, Olumi, Aria F., Mosquera, Juan Miguel, Demichelis, Francesca, Elemento, Olivier, Rubin, Mark A., Sboner, Andrea, Barbieri, Christopher E.
Published in Nature communications (24.04.2020)
Published in Nature communications (24.04.2020)
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Whole genome bisulfite sequencing of human spermatozoa reveals differentially methylated patterns from type 2 diabetic patients
Chen, Xiongfeng, Lin, Qinghua, Wen, Junping, Lin, Wei, Liang, Jixing, Huang, Huibin, Li, Liantao, Huang, Jianxin, Chen, Falin, Liu, Deli, Chen, Gang
Published in Journal of diabetes investigation (01.07.2020)
Published in Journal of diabetes investigation (01.07.2020)
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Future Projection for Climate Suitability of Summer Maize in the North China Plain
Zhao, Yanxi, Xiao, Dengpan, Bai, Huizi, Tang, Jianzhao, Liu, Deli
Published in Agriculture (Basel) (01.03.2022)
Published in Agriculture (Basel) (01.03.2022)
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Identification of novel prostate cancer drivers using RegNetDriver: a framework for integration of genetic and epigenetic alterations with tissue-specific regulatory network
Dhingra, Priyanka, Martinez-Fundichely, Alexander, Berger, Adeline, Huang, Franklin W, Forbes, Andre Neil, Liu, Eric Minwei, Liu, Deli, Sboner, Andrea, Tamayo, Pablo, Rickman, David S, Rubin, Mark A, Khurana, Ekta
Published in Genome Biology (27.07.2017)
Published in Genome Biology (27.07.2017)
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Oxidative desorption of thiocholine assembled on core-shell Fe3O4/AuNPs magnetic nanocomposites for highly sensitive determination of acetylcholinesterase activity: An exposure biomarker of organophosphates
Du, Dan, Tao, Yuan, Zhang, Weiying, Liu, Deli, Li, Haibing
Published in Biosensors & bioelectronics (15.06.2011)
Published in Biosensors & bioelectronics (15.06.2011)
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Journal Article
G3BP1 inhibits Cul3SPOP to amplify AR signaling and promote prostate cancer
Mukhopadhyay, Chandrani, Yang, Chenyi, Xu, Limei, Liu, Deli, Wang, Yu, Huang, Dennis, Deonarine, Lesa Dayal, Cyrta, Joanna, Davicioni, Elai, Sboner, Andrea, Robinson, Brian. D., Chinnaiyan, Arul M., Rubin, Mark A., Barbieri, Christopher E., Zhou, Pengbo
Published in Nature communications (18.11.2021)
Published in Nature communications (18.11.2021)
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Journal Article
Molecular characterization of a new gammapartitivirus isolated from the citrus-pathogenic fungus Penicillium digitatum
Yang, Zhu, Geng, Hui, Zheng, Yongliang, Yuan, Yongze, Wang, Menglan, Mao, Jiali, Zhang, Tingfu, Niu, Yuhui, Liu, Deli
Published in Archives of virology (01.11.2018)
Published in Archives of virology (01.11.2018)
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