Optimized nLC-MS workflow for laser capture microdissected breast cancer tissue
Braakman, René B.H., Tilanus-Linthorst, Madeleine M.A., Liu, Ning Qing, Stingl, Christoph, Dekker, Lennard J.M., Luider, Theo M., Martens, John W.M., Foekens, John A., Umar, Arzu
Published in Journal of proteomics (06.06.2012)
Published in Journal of proteomics (06.06.2012)
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Journal Article
Conference Proceeding
Identification of 4‑Hydroxyproline at the Xaa Position in Collagen by Mass Spectrometry
van Huizen, Nick A, Burgers, Peter C, Saintmont, Fabrice, Brocorens, Patrick, Gerbaux, Pascal, Stingl, Christoph, Dekker, Lennard J.M, IJzermans, Jan N.M, Luider, Theo M
Published in Journal of proteome research (03.05.2019)
Published in Journal of proteome research (03.05.2019)
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Journal Article
Exploring antimicrobial resistance to beta-lactams, aminoglycosides and fluoroquinolones in E. coli and K. pneumoniae using proteogenomics
Foudraine, Dimard E., Strepis, Nikolaos, Stingl, Christoph, ten Kate, Marian T., Verbon, Annelies, Klaassen, Corné H. W., Goessens, Wil H. F., Luider, Theo M., Dekker, Lennard J. M.
Published in Scientific reports (14.06.2021)
Published in Scientific reports (14.06.2021)
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Journal Article
antibody-based biomarker discovery method by mass spectrometry sequencing of complementarity determining regions
Dekker, Lennard J. M, Zeneyedpour, Lona, Brouwer, Eric, van Duijn, Martijn M, Sillevis Smitt, Peter A. E, Luider, Theo M
Published in Analytical and bioanalytical chemistry (01.01.2011)
Published in Analytical and bioanalytical chemistry (01.01.2011)
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Journal Article
Immune Responses Are Characterized by Specific Shared Immunoglobulin Peptides That Can Be Detected by Proteomic Techniques[S]
VanDuijn, Martijn M., Dekker, Lennard J.M., Zeneyedpour, L., Smitt, Peter A. E. Sillevis, Luider, Theo M.
Published in The Journal of biological chemistry (17.09.2010)
Published in The Journal of biological chemistry (17.09.2010)
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Journal Article
Differential expression of protease activity in serum samples of prostate carcinoma patients with metastases
Dekker, Lennard J.M, Burgers, Peter C, Charif, Halima, van Rijswijk, Angelique L.C.T, Titulaer, Mark K, Jenster, Guido, Bischoff, Rainer, Bangma, Chris H, Luider, Theo M
Published in Proteomics (Weinheim) (01.06.2010)
Published in Proteomics (Weinheim) (01.06.2010)
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Journal Article
Characterization of recombinant influenza A virus as a vector for HIV-1 p17Gag
de Goede, Anna L, Boers, Patrick H.M, Dekker, Lennard J.M, Osterhaus, Albert D.M.E, Gruters, Rob A, Rimmelzwaan, Guus F
Published in Vaccine (25.09.2009)
Published in Vaccine (25.09.2009)
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Journal Article
Up-regulation of collagen proteins in colorectal liver metastasis compared with normal liver tissue
van Huizen, Nick A., Coebergh van den Braak, Robert R.J., Doukas, Michael, Dekker, Lennard J.M., IJzermans, Jan N.M., Luider, Theo M.
Published in The Journal of biological chemistry (04.01.2019)
Published in The Journal of biological chemistry (04.01.2019)
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Journal Article
Circulating glioma biomarkers
Kros, Johan M, Mustafa, Dana M, Dekker, Lennard J M, Sillevis Smitt, Peter A E, Luider, Theo M, Zheng, Ping-Pin
Published in Neuro-oncology (Charlottesville, Va.) (01.03.2015)
Published in Neuro-oncology (Charlottesville, Va.) (01.03.2015)
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Journal Article
Integrating Serum Protein Electrophoresis with Mass Spectrometry, A New Workflow for M‑Protein Detection and Quantification
Zajec, Marina, Jacobs, Joannes F. M, de Kat Angelino, Corrie M, Dekker, Lennard J. M, Stingl, Christoph, Luider, Theo M, De Rijke, Yolanda B, VanDuijn, Martijn M
Published in Journal of proteome research (02.07.2020)
Published in Journal of proteome research (02.07.2020)
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Journal Article
Metabolic changes related to the IDH1 mutation in gliomas preserve TCA‐cycle activity: An investigation at the protein level
Dekker, Lennard J. M., Wu, Suying, Jurriëns, Cherise, Mustafa, Dana A. N., Grevers, Frederieke, Burgers, Peter C., Sillevis Smitt, Peter A. E., Kros, Johan M., Luider, Theo M.
Published in The FASEB journal (01.03.2020)
Published in The FASEB journal (01.03.2020)
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Journal Article
Rapid and Accurate Detection of Aminoglycoside-Modifying Enzymes and 16S rRNA Methyltransferases by Targeted Liquid Chromatography-Tandem Mass Spectrometry
Foudraine, Dimard E, Strepis, Nikolaos, Klaassen, Corné H W, Raaphorst, Merel N, Verbon, Annelies, Luider, Theo M, Goessens, Wil H F, Dekker, Lennard J M
Published in Journal of clinical microbiology (18.06.2021)
Published in Journal of clinical microbiology (18.06.2021)
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Journal Article
Contribution of Neuraminidase to the Efficacy of Seasonal Split Influenza Vaccines in the Ferret Model
Rosu, Miruna E, Kok, Adinda, Bestebroer, Theo M, de Meulder, Dennis, Verveer, Elwin P, Pronk, Mark R, Dekker, Lennard J M, Luider, Theo M, Richard, Mathilde, van den Brand, Judith M A, Fouchier, Ron A M, Herfst, Sander
Published in Journal of virology (23.03.2022)
Published in Journal of virology (23.03.2022)
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Journal Article
Phosphorylation Ratio Determination in Fresh-Frozen and Formalin-Fixed Paraffin-Embedded Tissue with Targeted Mass Spectrometry
Zeneyedpour, Lona, Stingl, Christoph, Dekker, Lennard J. M, Mustafa, Dana A. M, Kros, Johan M, Luider, Theo M
Published in Journal of proteome research (02.10.2020)
Published in Journal of proteome research (02.10.2020)
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Journal Article
Expression of virulence and antimicrobial related proteins in Burkholderia mallei and Burkholderia pseudomallei
Paauw, Armand, Scholz, Holger C, Mars-Groenendijk, Roos H, Dekker, Lennard J M, Luider, Theo M, van Leeuwen, Hans C
Published in PLoS neglected tropical diseases (06.01.2023)
Published in PLoS neglected tropical diseases (06.01.2023)
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Journal Article
Evaluation of different pretreatment protocols to detect accurately clinical carbapenemase-producing Enterobacteriaceae by MALDI-TOF
Monteferrante, Carmine G, Sultan, Sadaf, Ten Kate, Marian T, Dekker, Lennard J M, Sparbier, Katrin, Peer, Markus, Kostzrewa, Markus, Luider, Theo M, Goessens, Wil H F, Burgers, Peter C
Published in Journal of antimicrobial chemotherapy (01.10.2016)
Published in Journal of antimicrobial chemotherapy (01.10.2016)
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Journal Article
De Novo Protein Sequencing by Combining Top-Down and Bottom-Up Tandem Mass Spectra
Liu, Xiaowen, Dekker, Lennard J. M, Wu, Si, Vanduijn, Martijn M, Luider, Theo M, Tolić, Nikola, Kou, Qiang, Dvorkin, Mikhail, Alexandrova, Sonya, Vyatkina, Kira, Paša-Tolić, Ljiljana, Pevzner, Pavel A
Published in Journal of proteome research (03.07.2014)
Published in Journal of proteome research (03.07.2014)
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Journal Article
Identification of a Collagen Marker in Urine Improves the Detection of Colorectal Liver Metastases
van Huizen, Nick A, van Rosmalen, Joost, Dekker, Lennard J. M, Coebergh van den Braak, Robert R. J, Verhoef, Cornelis, IJzermans, Jan N. M, Luider, Theo M
Published in Journal of proteome research (03.01.2020)
Published in Journal of proteome research (03.01.2020)
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Journal Article
Quantitative Proteomic Analysis of Microdissected Breast Cancer Tissues: Comparison of Label-Free and SILAC-based Quantification with Shotgun, Directed, and Targeted MS Approaches
Liu, Ning Qing, Dekker, Lennard J. M, Stingl, Christoph, Güzel, Coşkun, De Marchi, Tommaso, Martens, John W. M, Foekens, John A, Luider, Theo M, Umar, Arzu
Published in Journal of proteome research (04.10.2013)
Published in Journal of proteome research (04.10.2013)
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Journal Article